Basic Information

Insect: Yponomeuta evonymella
Gene Symbol: -
Assembly: GCA_963969515.1
Location: OZ018370.1:2080556-2084796[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 7.3 6.1e+02 2.1 1.0 1 23 65 89 65 89 0.82

2 17 0.0061 0.51 11.8 0.5 2 23 116 138 115 138 0.90

3 17 0.045 3.7 9.1 1.3 2 20 161 179 160 183 0.88

4 17 0.018 1.5 10.3 1.3 1 23 188 210 188 210 0.94

5 17 0.0011 0.089 14.2 0.3 2 23 215 237 214 237 0.93

6 17 0.0046 0.38 12.2 1.6 1 23 242 265 242 265 0.95

7 17 0.00042 0.035 15.4 0.7 1 23 271 294 271 294 0.98

8 17 1.8 1.5e+02 4.0 0.2 1 8 299 306 299 315 0.80

9 17 2.9e-05 0.0024 19.1 1.6 1 23 324 346 324 346 0.98

10 17 3 2.5e+02 3.3 2.3 1 23 390 414 390 414 0.89

11 17 0.43 35 6.0 1.3 2 23 441 463 440 463 0.93

12 17 0.24 20 6.8 0.3 2 19 486 503 485 508 0.90

13 17 0.00027 0.023 16.0 0.7 1 23 513 536 513 536 0.92

14 17 0.0043 0.36 12.3 3.0 2 23 541 563 540 563 0.91

15 17 0.14 11 7.5 0.8 1 21 568 588 568 591 0.78

16 17 0.0015 0.12 13.7 2.0 1 23 597 620 597 620 0.98

17 17 1.6e-06 0.00013 23.1 1.5 1 23 650 672 650 672 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	7.3	6.1e+02	2.1	1.0	1	23	65	89	65	89	0.82
2	17	0.0061	0.51	11.8	0.5	2	23	116	138	115	138	0.90
3	17	0.045	3.7	9.1	1.3	2	20	161	179	160	183	0.88
4	17	0.018	1.5	10.3	1.3	1	23	188	210	188	210	0.94
5	17	0.0011	0.089	14.2	0.3	2	23	215	237	214	237	0.93
6	17	0.0046	0.38	12.2	1.6	1	23	242	265	242	265	0.95
7	17	0.00042	0.035	15.4	0.7	1	23	271	294	271	294	0.98
8	17	1.8	1.5e+02	4.0	0.2	1	8	299	306	299	315	0.80
9	17	2.9e-05	0.0024	19.1	1.6	1	23	324	346	324	346	0.98
10	17	3	2.5e+02	3.3	2.3	1	23	390	414	390	414	0.89
11	17	0.43	35	6.0	1.3	2	23	441	463	440	463	0.93
12	17	0.24	20	6.8	0.3	2	19	486	503	485	508	0.90
13	17	0.00027	0.023	16.0	0.7	1	23	513	536	513	536	0.92
14	17	0.0043	0.36	12.3	3.0	2	23	541	563	540	563	0.91
15	17	0.14	11	7.5	0.8	1	21	568	588	568	591	0.78
16	17	0.0015	0.12	13.7	2.0	1	23	597	620	597	620	0.98
17	17	1.6e-06	0.00013	23.1	1.5	1	23	650	672	650	672	0.98

Sequence Information

Coding Sequence: ATGTCCAAAGCTTGGCTTACACCCCTTTGCACAGCTGAGTGTAACGTGATAAGAGATATTAAAACAGACGTCATTCCGTTCACAGGATACGAAGGAGAAGACGAATGGACCGCGCTCCAACGGATGAGAGTTAACATGAAGCTCTTGCTTGAGAACACCAACGTTATGCCCTTCAGATGGGTTAGGAACAATTACAAGTGTTTCTTCTGCATGAACACCCGCTTCAGGGAAATCGCAGACTTGAGGGCTCACTACACGACCGAACACAAACGGTTGCTCTTGCCACGCATTTTGAAGAAAGTCATAACCAGATTGAGACAAATCAGGCTAGACGTGTCGGACCTGTCGTGCAAACTTTGCTCTAAGACTTTCGATGACGTGCACAAATTAATAGATCACATAGTTGAAGAACACAAGCAAAAATACCATTCAGGACTGGAGCGCCATTTCTTCCAAGTCAAACTGAGTGAGGACGGCCTCAAGTGTTTCGATTGCGGCGAGGAATTCAACTTTTTCCAGCACCTAGTGGCGCACTCTGTCAATAAGCACGAGAAAGGCATCTTCCTGTGCTCCAGTTGCGGGAAGGGCTTCGAGTTTTACAACAAGCTCAGAGAGCACACGGACAGGCACACGGAGCCGATTAAGTGCGCGTACTGCGAGAAAACCTTCGCCAACTCCGCCAACAAAAAGGCTCACGAAGCGAGCAAACATAACGTTGGCGGGTACCCCTGCAAAGAGTGTGGCTCGAGTTTCACTTCTTTCCACAAAATGCGACTCCACGCGCTCTCCGAGCACAACAAAGGCAACCGGTACCCCTGCAAAATGTGTTCTCTCACGTTTCCGTACATGCTAAAGTTGAAGAGGCACATCCGGTCGGTGCATCTGGGTGAAAAGTACAAGTGTCATATTTGCGACGCTCAGGTGGTGAACCTGCACGACCATATGGTGTGTCACAGCGATGTGAAACCGCATGTCTGCGAGGTGTGCCAAAAAGCGTTCGCTAGGAAGTATAACAAAGACGCCCATATGAAGACGCACCAGAAATCTGCGCGGCTTAAGCTTGAAGACGAAAAAGTGGCCTGGGAGTCACTTCTCCGGTTGAGAGCCAACTTGGGAGCGTTGCTCCGGCACACCAACGTCTTACCCTTCAGATGGGGAAGCCACACCTTCAAGTGCTTCGTGTGTCCCCACAAAGGCTTCACAGAAAGCAAAAGCATGAGGTCTCACTTCAGCGCTGAACACGCAGGCTTCAACTCGCCAAACGTTATAAGACAAGCCATACCCGCATTGAAACAGATCAGGCTCGATGTGACAGACCTACGCTGCAAACTTTGCTTAGACACTTTCGACGACTTACACAAATTAACAGCGCATCTAATTCAGAAGCACAGCGTGAAATACTTCACGGGATTCGAGCGCTATTTGTTCCAAGTCAAACTGGATTGCGCCCGGCTCAAATGCTTCGAGTGCGGCGCTGAGTTTGATTTTTTCCAACAGCTTGTGAAGCACTCGGTCGACGAGCACGAAAAAAGCGTTTTCCTTTGCCACGTTTGCGGCAAAGGCTTCGAGTTTGCAGACAAGTTAAACGCTCATAGGGACGTGAAGCACGCGGCGCCGATAAAGTGTTCACACTGCGAGAAAACGTTTACCAACTTCACGAACAGGAAGGCCCATGAGGTAAAAGAGCACAAAGTTGGCGGCTACACGTGCAACGAGTGCGGCCTGACATTCGGCGGCTTCCACAAAAGGAAACTCCACGCGATGGCCGAGCACGACCAGGGCAACCGATACACTTGCAAAGAGTGCTCCCTCACGTTCCTTTACAATAAAAAGCTGCAGCAGCACATCAAGACCGTGCATCGGAAGGAAAGGAAGACCTGTCCCATTTGTAACATCAAGGTGGTCTTCCTGCAAAAGCACATGGTTTGCCACAGCGACGAGAAGCCATTCGTCTGCGAGGTGTGCCAAAAATCGTTTGCGAGGAAACATAACGTAGTCGCCCATATGAAGAGGCACGAGAAATCTGCGAAATCTAGTACCTAG
Protein Sequence: MSKAWLTPLCTAECNVIRDIKTDVIPFTGYEGEDEWTALQRMRVNMKLLLENTNVMPFRWVRNNYKCFFCMNTRFREIADLRAHYTTEHKRLLLPRILKKVITRLRQIRLDVSDLSCKLCSKTFDDVHKLIDHIVEEHKQKYHSGLERHFFQVKLSEDGLKCFDCGEEFNFFQHLVAHSVNKHEKGIFLCSSCGKGFEFYNKLREHTDRHTEPIKCAYCEKTFANSANKKAHEASKHNVGGYPCKECGSSFTSFHKMRLHALSEHNKGNRYPCKMCSLTFPYMLKLKRHIRSVHLGEKYKCHICDAQVVNLHDHMVCHSDVKPHVCEVCQKAFARKYNKDAHMKTHQKSARLKLEDEKVAWESLLRLRANLGALLRHTNVLPFRWGSHTFKCFVCPHKGFTESKSMRSHFSAEHAGFNSPNVIRQAIPALKQIRLDVTDLRCKLCLDTFDDLHKLTAHLIQKHSVKYFTGFERYLFQVKLDCARLKCFECGAEFDFFQQLVKHSVDEHEKSVFLCHVCGKGFEFADKLNAHRDVKHAAPIKCSHCEKTFTNFTNRKAHEVKEHKVGGYTCNECGLTFGGFHKRKLHAMAEHDQGNRYTCKECSLTFLYNKKLQQHIKTVHRKERKTCPICNIKVVFLQKHMVCHSDEKPFVCEVCQKSFARKHNVVAHMKRHEKSAKSST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01546897;
90% Identity: iTF_01546897;
80% Identity: -