Yevo028737.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Yponomeuta evonymella
Gene Symbol
-
Assembly
GCA_963969515.1
Location
OZ018369.1:2037074-2040022[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.00045 0.037 15.4 2.2 2 23 155 177 154 177 0.96
2 16 1.4e-05 0.0012 20.1 0.5 1 23 186 209 186 209 0.98
3 16 0.086 7.2 8.2 2.1 1 23 221 244 221 244 0.96
4 16 0.0018 0.15 13.5 1.3 1 23 253 276 253 276 0.97
5 16 0.00035 0.029 15.7 0.2 1 23 288 311 288 311 0.97
6 16 8.8e-05 0.0073 17.6 0.3 2 23 339 361 338 361 0.96
7 16 0.00065 0.054 14.9 1.1 2 23 371 393 370 393 0.96
8 16 0.19 16 7.1 0.8 3 19 400 416 399 418 0.91
9 16 0.00045 0.037 15.4 0.2 2 21 424 443 423 446 0.94
10 16 0.0043 0.35 12.3 1.8 3 23 457 478 456 478 0.97
11 16 3.6e-05 0.003 18.8 3.3 1 23 483 506 483 506 0.96
12 16 0.021 1.7 10.1 0.6 3 23 519 540 517 540 0.93
13 16 0.11 9.2 7.8 5.5 1 23 570 593 570 594 0.94
14 16 0.00018 0.015 16.6 1.2 2 23 628 649 627 649 0.97
15 16 0.016 1.3 10.5 0.1 1 23 715 737 715 737 0.97
16 16 0.078 6.5 8.3 2.8 1 23 743 766 743 766 0.97

Sequence Information

Coding Sequence
ATGTCCAAAGAGGTCACAGAACGAATAGATCCAACCTCCTTACTACCTGATGAACCGATGGTTTATCAatacaagaagaaaaaaaagaagaagaaacgcAAACATCACCATGAAGATCCATTTAAGGGCCTGAATGATGTAAACCCATTTGCAACTCAAGTGATTATAGAGAAATGtttggatgatgatgatgatgatgatgatggtgatgggAATCATGATGCCATTTTTGACCCCGAAGTAATGGTGAAAGTTGAGGATATTGAGGTGGATTTGGATTTTAATGAGTTTGTGGACAACTCTGGTCTGGAAGCTGCAGCATGTGAGGAAAGCCAAGAGCCAGCTGTCAATATCAGCCAGCAAAAGAATCACGACGCGGTCCTCTTAACCTTCGAGAATGTTGTTGGTAATCGTCAACCTGAAAACGTAAAAACGGAGCGTGAGCCTGAAAAGAAAAtgttgacatgtgacatttgtCATCTAGTCTTCACTACCAATAGAACATTAGACATGCACCAACGTAACAAACACAAGGCGTTTAAGAgcaataatatctacacttgTGAAGATTGTGGGGTCTCGTATGAACAGAAAAACAGCTTAGTGGCTCATAGAAGGAGAAAGCATGGTCCAAATGCAGCCGTAGAAGATTCGGAGGAGCATACGTGTGACATCTGTGCATTGGTATTCAAGGGTTCTAATCGACTCCGTATGCACAAGCAGAGAAAGCATGGAGAGTACCATGAGAGTTTCAGATACGAGTGCATGCAATGTGGACTATCGTACGACAAATACTCAAGTCTTGTTACTCACACCAAAAGAAAGCACACGCATAaacgaaagaagaaaaaaaacacttggTATAACTGTCCAATGTGTCCTAAGATATACACGGCACGAGATGCCTATGTCCGGCATATACAACGGACTCATAACAAGGAAGAAGACCAGAAAATACCTCATGAATTGCTGGCGAATATCTCCCAAGGGAACTTCAACCAGTCTGGGGAGATACCATGCAAGGAATGTCCGTTAGTATTTTCCAGTGTTATGTACTTAAAGATGCATATGAGACGTAAGCATAATGCATACCGGGATGAATTCAGGCTCAAGTGCAATATCTGTAACTTATCGTATAATAAGATTGAGAGTTTGAAGCGTCATGTTAATAGAAAACACATGGCTTCAGGACCATTTTGTGATGTTTGCAATAAGACATTTGATAGTATGAAAGCATATGTGAACCATTCACATGAAAAGCCAATAGTTGAGTGTCAAATCTGTGGCTTGATATTTGCTTCGCCTGGAGGCCTACAAAAACATCTACGCTGTACTCATAAATTGGACATGGGACCTAAAACAGTATTCTGTACAGTTTGTAATGCAGGTTTTCACGAAAACAGGCAATTAAAAGAGCATATGAGAAAAGTACACTTACAGATAACCTACCCATGCCTTATTTGCCagaaaaactttaaaacaaagGAGAGCTATCGAAGACACATGTTTAGGTTCCACCCAACTAACTTTCCTTCAAAGAAGCCGGACCATTTGTGTGCAATGTGCTCAAGCGCTTTCACAAATGAATTTGAACTCAGCCGCCATATCAATCTGGTTCATAACAAAATGGAAAACATCAAAAAAGAGTCTGATGGTATCAAAAAAGAGGTTGAAGATGAGAAGCCGAACGAAGATCAGAAACAAATGTTCCAGTGTACAAAATGTCCTGAGGTTTGTCATACGTGGGAAGAGATACGTAAGCATTATGAACAATTCCACCACAGAACTGAGGAAACACAGTGTCAAGCTTGCGGTCAGATCATGCCAGACTCAGAGCTGGCGAAGCATATGAAACTAGTCCATCCTGTGGTAGTCGACTTGAAGTGTTCATATTGTGACTACCAAACAACCTCAAAAGTCAGCTTAACGCAACACATATTGAGACATAAGAATGCTTCAACATTTAACTGTGATTATCCGAACTGTCGATATAAAAGTTACTATAAAGACGCTATGGACAAACACAAAAAGAAGCATCAAGAACAGGGTGTCAAGTTGCAGTGCGCTCATTGTCCATTCCAAAGCATGAACAAATACATCTTGAGATATCATGAAGAGGAACACGCAACGGGCAAGAAGAAATACGTCTGCGATCAATGTGATTATGCCACTATCTTACCAGCTAACTTAGTTCAACATAAGTACAAGCACTCAACAGTCAAAAGGTTTAAATGTGAATACTGTCCGTTCGCAACAAAGTATAATACATCTCTAAGGTTTCACGTGAGGAAAAAGCATTGTGATTTACCATTCTTGGCTAATGCTAGCTCCACCGTAGATATTAGTAATAAAGTTTAA
Protein Sequence
MSKEVTERIDPTSLLPDEPMVYQYKKKKKKKKRKHHHEDPFKGLNDVNPFATQVIIEKCLDDDDDDDDGDGNHDAIFDPEVMVKVEDIEVDLDFNEFVDNSGLEAAACEESQEPAVNISQQKNHDAVLLTFENVVGNRQPENVKTEREPEKKMLTCDICHLVFTTNRTLDMHQRNKHKAFKSNNIYTCEDCGVSYEQKNSLVAHRRRKHGPNAAVEDSEEHTCDICALVFKGSNRLRMHKQRKHGEYHESFRYECMQCGLSYDKYSSLVTHTKRKHTHKRKKKKNTWYNCPMCPKIYTARDAYVRHIQRTHNKEEDQKIPHELLANISQGNFNQSGEIPCKECPLVFSSVMYLKMHMRRKHNAYRDEFRLKCNICNLSYNKIESLKRHVNRKHMASGPFCDVCNKTFDSMKAYVNHSHEKPIVECQICGLIFASPGGLQKHLRCTHKLDMGPKTVFCTVCNAGFHENRQLKEHMRKVHLQITYPCLICQKNFKTKESYRRHMFRFHPTNFPSKKPDHLCAMCSSAFTNEFELSRHINLVHNKMENIKKESDGIKKEVEDEKPNEDQKQMFQCTKCPEVCHTWEEIRKHYEQFHHRTEETQCQACGQIMPDSELAKHMKLVHPVVVDLKCSYCDYQTTSKVSLTQHILRHKNASTFNCDYPNCRYKSYYKDAMDKHKKKHQEQGVKLQCAHCPFQSMNKYILRYHEEEHATGKKKYVCDQCDYATILPANLVQHKYKHSTVKRFKCEYCPFATKYNTSLRFHVRKKHCDLPFLANASSTVDISNKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01545091;
90% Identity
iTF_01545968;
80% Identity
-