Yevo029379.1
Basic Information
- Insect
- Yponomeuta evonymella
- Gene Symbol
- -
- Assembly
- GCA_963969515.1
- Location
- OZ018370.1:1748934-1752497[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 1 86 4.8 0.3 2 22 31 51 30 53 0.88 2 22 0.0014 0.11 13.9 1.7 1 23 119 141 119 141 0.96 3 22 0.0059 0.49 11.8 0.5 1 23 145 168 145 168 0.95 4 22 0.016 1.4 10.5 0.5 1 19 174 192 174 198 0.92 5 22 0.62 52 5.5 0.3 2 22 266 286 265 288 0.89 6 22 0.00098 0.082 14.3 0.1 2 23 314 336 313 336 0.94 7 22 1.9 1.6e+02 4.0 0.2 1 14 357 370 357 379 0.74 8 22 0.0023 0.19 13.1 0.4 1 23 383 405 383 405 0.94 9 22 0.018 1.5 10.3 0.2 5 20 413 428 410 430 0.89 10 22 4.5 3.7e+02 2.8 0.3 3 23 439 460 437 460 0.88 11 22 0.31 26 6.4 0.4 1 23 467 490 467 490 0.95 12 22 0.13 11 7.6 0.5 2 23 495 516 494 516 0.94 13 22 0.00028 0.024 16.0 1.3 1 21 522 542 522 547 0.94 14 22 0.31 26 6.4 0.4 2 23 595 617 594 617 0.94 15 22 0.0041 0.34 12.4 0.1 2 23 644 666 643 666 0.93 16 22 0.045 3.8 9.1 1.7 1 23 687 709 687 709 0.95 17 22 0.002 0.17 13.3 0.1 1 23 713 735 713 735 0.97 18 22 0.0016 0.13 13.7 0.2 3 21 741 759 739 760 0.92 19 22 2.3 1.9e+02 3.7 0.7 2 20 768 786 767 790 0.77 20 22 0.0048 0.4 12.1 0.2 1 23 797 820 797 820 0.95 21 22 6.5e-05 0.0054 18.0 1.7 2 23 825 846 824 846 0.97 22 22 4.8e-05 0.004 18.4 1.4 1 21 852 872 852 877 0.94
Sequence Information
- Coding Sequence
- ATGAATGTTTGCGCAAAGTCTCCATCGCTGTCCTGCGCGACCTCCCGTAGACTGGAGCTCGCGCAGATCAAAGGGTCCTCGCACAATATCGAGTGTTGCTATTGCTCCGGAGTATTCGATGACCCCGAGCGGTTCAGATGGCACGTAGACGATTCGCACTCTGACGTGGACAGATCTCTCGTACACCACAGATGGATCACCCCGCGGGTCGATATCACCAATCTGCGTTGTAGGCTCTGCTCCCAGCCGATGGAGACGTTAGACAAGCTTGTTGAACACTTCAAATCTGGACACGGCATGAAGATTCAGTCTAAACCTTCCGCGATAGTGCCAATGAAACTAAATAAGGATCTGTACGTTTGTCTTATCTGTAGCAAGCGATTCTCGGAACGTTTTAGCCTCTTTAAACACTCTGGAACACATTTCGGGAGTTACATATGTGACGCGTGCGGTAAAAATTACCAAACCAAGTTCGGCCTTAGAGTTCACACGGAGAAGCAACACGCCAACGCAGGGAAGTTTATTTGTGCAAAGTGCAAGGAATTGTTTGATACTAAGGAGGAACTGAAAAAGCACGGAATCGAAACCAAGCACGGCTTGGCGTCGGTTTGTCCAATATGTGACGATAGGTTCACCTGTAAGGAGCTCAGGGATCGCCACCTTGTCGAGGTCCTATTCTCTTTTCTAGCTGGAAACCTGATTGCCGGTGATGCCGCTCTGGAGACAGCCTGTTTCATACTAAAGCATTCCAcggcctacccctttgggatacaacGGAATCTTCCGAACAAGATTCAATGTTGCTATTGTGATATATTTATCGGTGACCCCGTGCAGTTTCGACGGCACGTCGATGACGAGCATTCGAATGTCGACCGATCGCTCTTGAACGTCAAACGTTCGAAGCAGGCGGCTACCAGGGTCGATATCACAGATCTCAGATGCCGACTTTGCCCTAAGCCTTTCGAAACGTTAGAGCAGCTAGCTACCCACTTGAAAGACGCTCACGATATGACACTGCAGACAGAGGTTACCGGGCTCGTGCCAATGAAATTAGAGAAGGATCGCTACATCTGCGttacttgtaataaaaaattcGCCGGCCTGACGATACTGTACATACATTCGGGTACACATTTCGCGCGGTACATCTGCCATACATGCGGCAAGAACTTTGAGACCCGCGGCGGGGTCCAGGGCCACGCCGCGAAACACATTAATAAGATAATCTGTATCAAATGTAAGGAAGTATTCGAGACTAAGGACGAATTGAAAAAGCATAAGCTCGTGAGTAAGCGCTGTCAACCGATGGCCTGCACATTGTGCGTCGAACGATTCACTTGTTGGGAACGCCTGCAGGTTCATCTAGTGGAAGTGCACAATAAGCCCAAGAAAAACTTCCCGTGTCTGGAGTGCGGTGACGTATTCGAGACTCGGGTCTCCCGGTACAAGCACTTCAAATCTGCTCACACTGACGAGCTGAAGTGCATCTACTGTGAGAAGAAATACGGCATTAAGCGAGACTTGGATGACCACATGAACACTCACACGGGCGAGCGACCCTACAAGTGTAATGAGTGTGATAAATCGTTCAACGCGCTGAAGAGATTGAGGAAACATCAGGCCTCGAAGAGGGTACACGCCCACCTGAAGGAAATTGTCCAAGATCCGTCTATTGCGGACCTGTTCGTCGCTGGTGCCGCGGCGGAGTCGGCCGGTCTTATTCTAAATAACTCGACGGCATATCCTTTCGCGCTTCGAACCAGGCATCCGAATAAAATACAATGTTGCTACTGCGAGAAACTGATCTCCGACCCGGTACAGTTCAGGGAGCATGTGGACATGGAGCATGCCACGCTTTTGGACCGCTCCGTGCTCAAATATAAGCGCGCGCAACAGTCCGCCACGCGGGTCGACATCACAGACCTCCGGTGCCGACTCTGTCCCAAACCCTTCGAAAACTTAGAGCTATTAGCGACCCACTTAATAAATTTCCACAAAATCAACCTTACCACTATAGAATCTGGCCTCGTGCCAATAAGACTAGAGAAGGACCGTTACGTTTGCGTCACGTGCCATAAGAAATTCTCTGGTCTCACCATGCTTTACCTACACTCGGGCACGCACAATGCGAGGTATATCTGCCACACTTGCGGCAGAAACCTCGAGACCGCCGGCGGCCTGCGAGCCCATGCTATACGACATTTGAACAAGATTATCTGTCTCAAGTGCAAAGAGGTGTTCCCTTCGAAGGAGGAACTGAAAAAGCACAAACTTACGAGTAAAAGGTGTCTACCATCCGTCTGCAAGATTTGTCAGGAGCGGTTTACGTGCAGGGAGCGGATGGAGATCCACCTCGTCGAAGCACACAATCAGCCGAAAAAGTTTTTCCCTTGTTCAGAATGCGGGGAGGTTTTCGAATCGCGCGTCGCACGCTATAAGCATTTCAAGTCTGCGCACACAGACGATCTGAAATGCAAGTACTGCGAAAAGCGGTACGGAACGAAGCGTGACCTAAGCGATCACATGAACAGTCACACGGGGGAAAGACCTCACAAGTGTACGATATGCGAAAAGACTTTTAGTGCTAGTAAGAAATTACGCAAGCATATGGCATCGCCGAGGGTGCACGCCCATCTCAAGATCGCTTAA
- Protein Sequence
- MNVCAKSPSLSCATSRRLELAQIKGSSHNIECCYCSGVFDDPERFRWHVDDSHSDVDRSLVHHRWITPRVDITNLRCRLCSQPMETLDKLVEHFKSGHGMKIQSKPSAIVPMKLNKDLYVCLICSKRFSERFSLFKHSGTHFGSYICDACGKNYQTKFGLRVHTEKQHANAGKFICAKCKELFDTKEELKKHGIETKHGLASVCPICDDRFTCKELRDRHLVEVLFSFLAGNLIAGDAALETACFILKHSTAYPFGIQRNLPNKIQCCYCDIFIGDPVQFRRHVDDEHSNVDRSLLNVKRSKQAATRVDITDLRCRLCPKPFETLEQLATHLKDAHDMTLQTEVTGLVPMKLEKDRYICVTCNKKFAGLTILYIHSGTHFARYICHTCGKNFETRGGVQGHAAKHINKIICIKCKEVFETKDELKKHKLVSKRCQPMACTLCVERFTCWERLQVHLVEVHNKPKKNFPCLECGDVFETRVSRYKHFKSAHTDELKCIYCEKKYGIKRDLDDHMNTHTGERPYKCNECDKSFNALKRLRKHQASKRVHAHLKEIVQDPSIADLFVAGAAAESAGLILNNSTAYPFALRTRHPNKIQCCYCEKLISDPVQFREHVDMEHATLLDRSVLKYKRAQQSATRVDITDLRCRLCPKPFENLELLATHLINFHKINLTTIESGLVPIRLEKDRYVCVTCHKKFSGLTMLYLHSGTHNARYICHTCGRNLETAGGLRAHAIRHLNKIICLKCKEVFPSKEELKKHKLTSKRCLPSVCKICQERFTCRERMEIHLVEAHNQPKKFFPCSECGEVFESRVARYKHFKSAHTDDLKCKYCEKRYGTKRDLSDHMNSHTGERPHKCTICEKTFSASKKLRKHMASPRVHAHLKIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01546849;
- 90% Identity
- iTF_01546849;
- 80% Identity
- -