Yevo006065.2
Basic Information
- Insect
- Yponomeuta evonymella
- Gene Symbol
- -
- Assembly
- GCA_963969515.1
- Location
- OZ018346.1:15771289-15782448[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.016 1.3 10.5 1.0 3 23 694 715 693 715 0.96 2 24 5.4 4.5e+02 2.5 1.1 4 23 1084 1105 1082 1105 0.84 3 24 0.046 3.9 9.0 0.3 1 21 1110 1130 1110 1131 0.96 4 24 5.6 4.7e+02 2.5 0.3 1 23 1173 1196 1173 1196 0.84 5 24 0.21 18 6.9 0.8 3 21 1207 1225 1205 1226 0.93 6 24 1.1 94 4.7 0.1 2 23 1234 1256 1233 1256 0.89 7 24 0.011 0.92 11.0 0.4 3 23 1276 1297 1274 1297 0.95 8 24 0.13 11 7.6 1.0 1 23 1303 1326 1303 1326 0.93 9 24 0.16 14 7.3 0.0 1 23 1351 1374 1351 1374 0.90 10 24 0.024 2 9.9 3.4 1 23 1379 1401 1379 1401 0.97 11 24 0.36 30 6.2 0.1 1 23 1407 1430 1407 1430 0.95 12 24 0.0029 0.24 12.8 1.3 1 23 1443 1465 1443 1465 0.97 13 24 0.00023 0.019 16.3 1.8 1 23 1513 1536 1513 1536 0.97 14 24 0.0063 0.52 11.8 1.9 1 23 1601 1624 1601 1624 0.96 15 24 0.0043 0.36 12.3 1.5 2 23 1657 1679 1656 1679 0.95 16 24 0.19 16 7.1 0.0 2 23 1685 1707 1684 1707 0.95 17 24 0.1 8.6 7.9 0.1 1 21 1751 1771 1751 1772 0.94 18 24 0.0006 0.05 15.0 0.6 1 23 1782 1804 1782 1804 0.94 19 24 0.00015 0.012 16.9 0.3 2 23 1893 1915 1893 1915 0.93 20 24 1.8e-07 1.5e-05 26.0 1.3 3 23 1922 1942 1921 1942 0.98 21 24 0.21 18 6.9 0.2 3 23 1962 1982 1960 1983 0.94 22 24 0.16 13 7.4 0.0 1 23 2005 2027 2005 2027 0.97 23 24 0.0066 0.55 11.7 0.4 1 23 2033 2056 2033 2056 0.95 24 24 0.00033 0.028 15.8 0.4 1 23 2065 2088 2065 2088 0.96
Sequence Information
- Coding Sequence
- atGAGTGTGATTTATGATCATGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCGTACCACCAGTTCTGACGGTACGGAACCCCCCGTCCTGGCATCAAAAATCAAGGATTGTGTGGCTGTCCAGATAAACGAGAATGACGACCTGCCGACGCGTGTCTGTAGGAAGTGCGTCGACAACGTGAATAACTGGCACATATTTAAGAAAGTGTGTGAGAGGACCCAAAACAAACTTCAATCTTTGGCAAAAAAAGATGGCAGCCAACTAGAAGAGgtcaaaataaaaagtgaaCCCCTGAATGATGAACTTTATGATGATGGAGTGGTCATTGATGGCTCGTATCCCAGTCTGGAGCAGAATGCTACTTCTTCAAGCAAACTCCAGCCAGAAGGCCCTCCAATCTTGGCATCGTTGGGGCTTACACCGAGGAGTGATAAGAACTGTGTGGATCCACGAATGGATTGGCATCGGGTCCATGCTATATTGGACATGGTTCAAGATGATGAGGTCATTGATACTCTGCAGAATTTCGAGGAATGTGATGTTCTACATAAATCTGAACACGGGTCTGATACAGAAATGGAACTACTTTCTGATATTGATGATGAATTTATTGACTGCAAAGTTGGTTACAAAGGTAGAGATAAAACCATCCTGTCTAAAGATCCAAAAATATCCCATTCTGATACTAAATCAAAAATAAAGCAATCATCTGCATTACTTATCAAAAAATTTGAAAGTGTTAATGCGAAACACTTTCCACAGCCTCTTGATGCTTGGCAGAATTTTTTTAGCGATGATATTTTAGAACTCATCGTTGAATCCACTAATGTGATTATCATCAAAAGAGGACTTGACGTTTCTTCCAACACCACAATACAAGAAATCAAAGCTTTCTTTGGAATCCTGTATCTTCATGGGATCACGAGACCAGTTTACCAAAAACGAAGTGAGCTTTGGAACGAAAAATATGGAATAGCAGGTGTAAAACATACCATGAGCCATGACCGATTTAAGTTCCTGCTTGGTAATTTATGTTTTGATAttgaagatgatgatgagagtATGCCACAGTTTGACACCATGAAGCGTATgcgaaaaatatttgaaatcttTGCGATGAACTGTAGAACAATGCATCACATTGAAAATGTTGCAGTAATTGATGAGATCATTGTGCCAGTCTTTGGACCATGTCCATTCCGATATGACATTGATAAGAAGCAGTTAAAGAAAGGCATTAAATTGGTATTGCTTGTGGATCCAAATAGTTTCTTTGTCAGTAACTTGGATGTGATTATCGATCCATACTTTGGTCCAGACGAAATTGTAAAGAAGTTGGTACATCATCTTGCTGGTACTGGAAAAACTATAGTTATGGACAGTTGGTACACGACAGTCAGTTTAATGGAGACACTCAAAACAGAATATCAGCTGTACAGCATCGCAGCATTAAGTAATGACAGTGGGGTCATACCTCCAGTTTTCCTGTCAAATCTGAGGAAATCTGGAGCATTAATGACTGGCTTTCTTGATCGAGACACATCTTTGTCTTCTTACGTAAACAGTGCGTCGAAGTCAGTCAATGTTTTGACCAATCATCCAAAGTATTACAAGAAAGGTCATGTAAGCCATGCAACGCCCGTGTCAGCTTACAAAAAGAACCAATCAGCAGTAGAAGTAGTGGATGTTCTGATGCATTATTACACAACTATGCAGTATAGCAATGACTGGACGATGTCTATATTGTTCACGCTGTTGAATATCGCCTCAGTAAATGCTCAAGTGCTGTGGGGTACACAGTACACCAGCAATCTAATACAGAGGCGTGTCTTTATAAGAGAGTTGGCATTTGGTCTTATGGCGCACAGTTACAAACGGGTCAAGCAGCCTCTGCTGGGCGTCGAGAGCGAGAAGGAAGAGATAGACTACGAGGAGGAGGTAAATGAGCCCAAACAATTTGAGAAAGTTTCCAACATTCCTGAGGTATCAATTACCGTCATGCGTCCTACCGGGGAGACCCTGCAACCGCGTCAGGGATTTCAACAACTAGCGTCTAAGAATTGCCTCATTTGCGACCGCGCGTACCGGTACTCGCACAATGCCCGCCGCCATGAGCTCACCGCGCATAGCTTCGATCGGTACACAAACAAAGTGACGAACAAAAAACACCCACTTGCACACATGCAACCCAAACTGCGCCCCAACCCGTTCAATCCTAAAGCGCGTCTTATGCCAAACCCAATCAGCcacaaaatgcaaaaaatacaaCTGCGCCCCAAATCAATGCCCAGCAAAATGGTGCCGCATAAGGTTATCCCTAAACCTGTGCCGATCAAGGCTGCGCCTATGAAACAAGCACAAAACAACTTGCCGTACCCTCTTCGAATTAAGGCGCTGAAAGACTTGCAAATTAAGAAGAAGGAACCACAAATCCTTAAGACTCTTCTAACATCTAAGCCTGAGGTCTTGGTGGCTGAGCCAGAAATCGTCAACTCTGGCCCAGGGAGTCCCGAAACATTAATTTCCGAGCCAGAAATCGCGTCATTCCAAGTGGAAGCTATCTTATCTGAGCCGGACGGCTTCGACGGACAACATGGAGAAGAAGAAAGTGAGAGAGATACTCATGTGAATAACCAAAGTGCGTATGATAATGTCGACATGGAGTCTGACAATGAAATCGAGATCGCGCACGAGCGGGATGAAGAAATTACTGACAGACTACATATTGACGAAGAAAACGGCGAAGAAAGGATGAGCGAAAACGAAAATAACGCGGACGACAGTCAAATGTATGATGATGAAAATCAAGAAGAAAATCAGGAAGACGAAGAAGCAGATGGTAACGAAGACGCAGAGATGGATGAAATATCTGAAGCGAAAGCTGATGATGAAGGCAAAGATGGCGATAACATAAATGAAGATGGAGGTGAAGAGTACCACGAAGTAAATCCCGATAATAACGATGAAGACATGGACGATGAAGAAGATGCGGCGCCCCTCGGCCTTGCACCCGTCGTGGAGATCAACGAAGAACAACACACTAATGACAGCGAAATCCACGAAGAGGATGTTGAGGAAGACGATGAATTAGACGAATCGGCCGATGCCAATGACACCGTTGATGGCACGGCGCAGGAAATTGACCCTGACAAGATATACGTCACCAAGACTCAAAGGGATTTCATACTCAAGTACCGCGATGTTATTCAGCAAATTAACACCAAACGCTGCCTTTGTTGCGATAAAGAATACCCGCGTCGCAAAGCCGTTATACAACATCTGCAGAAAAATGGACACAAGGTTCCCAAGCACACATGCTACAATTGCGTCATCACTTTCAGCCACATCGGCGCGCTACTCAGCCACATGCGGGCAGATGTGTGCACAAACCTTTGGAAGGTTATTTACAATGAAAACGGCATAACTGACGACATGATTGTTGAAGATGAACCTAAAGATAATAAGGTCCAGTATAAGGATATTTTTAATGCGAGATCCTACGCATGCAAACTGTGCCCGGCTAAATTCCAATTGAAACAGTTCATTACGAAACACGTCCTTGATGTTCACGAAGATGGACAATCTCTTGTGACCTTGGCGTGTGTTCACTGCCGGTCACGGTTCAAAGACAAGGGTCTCTGGAAGAAGCATGTACGCAATGGGGAGTGCACCATTTATATTTCGTGCGATCTATGCTCAGAGAAGTTCGGCAATGTGCAGGATTTCAACAACCACGCCTTGGCCGTGCACGCCGGGAGTTTTGATCCTGAAAACCAGTCCAAGTGTGTAGATGGTCGACCGACTGATTGCCCATTATGCGAGAAGAAGTTGGCTACCTACCAGAACTTGGTCAAACATCTGAAATTATTCCACGATGAAGACAGACCGCATTACTGTCAAAACTGTGATTCCAAGTATGAAAAGGCTGAGGAATTGAACAATCACATTTATTTGGAACATTCAGATAAGGCTATGGGTATCAAGTCTGAGATCGATATGTCTATCGTCAAAGAAGAAGCTGAAGAATATCACTACTCATGCACTGAGTGCAACGCTATATTCGAGACTGTCGATGCTTGGACCGACCACCAAGTTGCGGAACATAATCAAGTGGCTCACCACTGCGACCAGTGCGAGAAAAAATTCTTGCGTCCGTCCGAGCTCGCCGAGCACAAGAACACACACTTGCGAGTGAAGCTCTATCCTTGCAGCATCTGTGCAGATTCTTATAGTACCCCGCAGAAACTATCGGACCATGTGCAGCAAGCGCATCCAGATGCCTCCGTGTACGCTGCAGCCGAGACAGAGTTCTTCTGCGAAATCTGCATAAGGTCGTTCAAGAGTCGTCAAGCGTACTCCAATCATATGCGCATTCACGCCAAAGTGCCCACGACCAACAGAAAACCCGGCGAAAAAGGATTCGCGCCACAAATAGTCGGCAAACCCGTCAAACAATTCCCGATTGTGCAACCTGGAAATGTACTGTACAAGACCAATTGCAATGTTCCTAATGCTCCATACTCGTGTGATATTTGTGGCAAAGGATTTATGCACAAGAAGAATATATGGAAACATAAGAAAGTTTTGCATGCTGACCTTGTCAATGACAGAAATGACAGCGAAGAAAACACCATGCAAGCGTCTACAGAAGATGACGAGAATAATGTCGACGAGAATGGCGCTATACTATCGACACCACAGTTCGACAGTTTTAATTTCTCGAACTACACAAACAATGCGCAAACAACGTCTACACCGCAGGAGGCAAAACCAATCTTAACATTTTCATGTGATCTTTGCTACAAGAAGTTCCCACTCAAGACTAGCTTATGGAAGCACAAACGGGCAAAGCATGGAATTATAAATGCAAGCACTAGCGGTAACGCTGAGACACCAACTCACGTCATCCCAGTTCAACTTCAATCAAGTTCTGGAGACGGCAGCCGGTCGAGTTGCACTATTTGTAAAGTTACGTTCGCTGACAAAAAATCATATTACAGGCATAGAAAGAATGTCCACAAATCAACTTCCCAGGTGTGCAAGATTTGCGGGATACCACTCAGCTCGACCTTAGAACTGTATGAGCATCTGAGAGCGGCCCACGCGCGCGAGCTTCTGGGATTCAACGCCAGTCAAGGCGTGGTGAAATCCCATTCCCAAGAGACGGGGCAGGAGTTAGAAGTCGATTACGAACCGGAGTCCGGCGACCCCAACACGGAATATCAAGCCCGCTACCCATGCGAGGCCTGCGGAAAACAGTTTGTTGGACTTCTGGCCTTACAAAACCATCAGTGTGTAAACCAGTTGTCTAATCAGCCTCAGACATTCGAATGCGAAATCTGCCACAAAAGTTACACCTCGATCGCCGCGCTGAAGAGCCACCGCGGCTGGCATTTGCGATCGCCTGATGGTAAGGCGGCCGCCAATAATTCCGGCCTATGGATGCCACAGCATAAAGTCACTAATAAGGTCAGCAAACACGAAGTAGTGGACCCTGTGCAGCTCGCCCGTGTCACCCACACAGCTCCAACCGCTACAGTCGCCAAGCGAAGACTGCCACCGGAAGTAGAAGTGACTGTCGTAAACCCTAACAAGAAATTACGCTCAGATGATTCCATCGAGATGGACCACAGTAATCCCGGCGGATCCGAAGATCGCTACTGCACTATATGCGACAAGGAGTTTACCAAGAGAGCGGCGTACCAGCGCCATATGGACGAGGTCCATCAGCCTAATTCCGTGTTCTGTCCCGTTTGTGACAAAAGTTTTACCAGGAAATCGACTCTCCTTGTTCACATGAGGAAGCATTACGAAGGCGGCGAGGGCAGCTCGTCGGCCACCGCACAAGACGAAGACTCGTATGGTTGCGATCTCTGCGGGGCTCAGTACCAAAACGCCGGCGCGTTGCGATCTCACAGGGCGCAGCATCACGGCGAAGTTGAGTCAGCCGAGTCGGAAGATGAGGGCAACGTGCCGGCTGCTCCTCCTGGTGAATTCACTTGCGGACAATGCGGTGACGGCGTCGCGACCCCGCGCGACCTTATCGCCCACCGAACCATGCATGCCACTGCCTCTAAATACTTCTGCACGGTTTGCAAGGTGTACTTCGCTCGGTCCGTCGACTTATCTGCACACACACGGGCCCGCCACGCCAGCGATGGCGAAAAGGTGTTCTTCCCATGTGCCATGTGTGACCGTTTCTACATGAACAAGAAAAGTCTCCAAAGACACATTGAGATGGCTCACTGA
- Protein Sequence
- MSVIYDHVCRLCLSSRGELLPIFRTTSSDGTEPPVLASKIKDCVAVQINENDDLPTRVCRKCVDNVNNWHIFKKVCERTQNKLQSLAKKDGSQLEEVKIKSEPLNDELYDDGVVIDGSYPSLEQNATSSSKLQPEGPPILASLGLTPRSDKNCVDPRMDWHRVHAILDMVQDDEVIDTLQNFEECDVLHKSEHGSDTEMELLSDIDDEFIDCKVGYKGRDKTILSKDPKISHSDTKSKIKQSSALLIKKFESVNAKHFPQPLDAWQNFFSDDILELIVESTNVIIIKRGLDVSSNTTIQEIKAFFGILYLHGITRPVYQKRSELWNEKYGIAGVKHTMSHDRFKFLLGNLCFDIEDDDESMPQFDTMKRMRKIFEIFAMNCRTMHHIENVAVIDEIIVPVFGPCPFRYDIDKKQLKKGIKLVLLVDPNSFFVSNLDVIIDPYFGPDEIVKKLVHHLAGTGKTIVMDSWYTTVSLMETLKTEYQLYSIAALSNDSGVIPPVFLSNLRKSGALMTGFLDRDTSLSSYVNSASKSVNVLTNHPKYYKKGHVSHATPVSAYKKNQSAVEVVDVLMHYYTTMQYSNDWTMSILFTLLNIASVNAQVLWGTQYTSNLIQRRVFIRELAFGLMAHSYKRVKQPLLGVESEKEEIDYEEEVNEPKQFEKVSNIPEVSITVMRPTGETLQPRQGFQQLASKNCLICDRAYRYSHNARRHELTAHSFDRYTNKVTNKKHPLAHMQPKLRPNPFNPKARLMPNPISHKMQKIQLRPKSMPSKMVPHKVIPKPVPIKAAPMKQAQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVAEPEIVNSGPGSPETLISEPEIASFQVEAILSEPDGFDGQHGEEESERDTHVNNQSAYDNVDMESDNEIEIAHERDEEITDRLHIDEENGEERMSENENNADDSQMYDDENQEENQEDEEADGNEDAEMDEISEAKADDEGKDGDNINEDGGEEYHEVNPDNNDEDMDDEEDAAPLGLAPVVEINEEQHTNDSEIHEEDVEEDDELDESADANDTVDGTAQEIDPDKIYVTKTQRDFILKYRDVIQQINTKRCLCCDKEYPRRKAVIQHLQKNGHKVPKHTCYNCVITFSHIGALLSHMRADVCTNLWKVIYNENGITDDMIVEDEPKDNKVQYKDIFNARSYACKLCPAKFQLKQFITKHVLDVHEDGQSLVTLACVHCRSRFKDKGLWKKHVRNGECTIYISCDLCSEKFGNVQDFNNHALAVHAGSFDPENQSKCVDGRPTDCPLCEKKLATYQNLVKHLKLFHDEDRPHYCQNCDSKYEKAEELNNHIYLEHSDKAMGIKSEIDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKLYPCSICADSYSTPQKLSDHVQQAHPDASVYAAAETEFFCEICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEKGFAPQIVGKPVKQFPIVQPGNVLYKTNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLVNDRNDSEENTMQASTEDDENNVDENGAILSTPQFDSFNFSNYTNNAQTTSTPQEAKPILTFSCDLCYKKFPLKTSLWKHKRAKHGIINASTSGNAETPTHVIPVQLQSSSGDGSRSSCTICKVTFADKKSYYRHRKNVHKSTSQVCKICGIPLSSTLELYEHLRAAHARELLGFNASQGVVKSHSQETGQELEVDYEPESGDPNTEYQARYPCEACGKQFVGLLALQNHQCVNQLSNQPQTFECEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTNKVSKHEVVDPVQLARVTHTAPTATVAKRRLPPEVEVTVVNPNKKLRSDDSIEMDHSNPGGSEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMRKHYEGGEGSSSATAQDEDSYGCDLCGAQYQNAGALRSHRAQHHGEVESAESEDEGNVPAAPPGEFTCGQCGDGVATPRDLIAHRTMHATASKYFCTVCKVYFARSVDLSAHTRARHASDGEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01546844;
- 90% Identity
- iTF_01546844;
- 80% Identity
- -