Basic Information

Insect: Yponomeuta evonymella
Gene Symbol: -
Assembly: GCA_963969515.1
Location: OZ018355.1:3960943-3967871[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0035 0.29 12.6 1.8 1 23 135 157 135 157 0.98

2 12 2.6e-05 0.0022 19.2 0.6 2 23 162 184 161 184 0.94

3 12 9.5e-05 0.0079 17.5 0.8 2 23 216 237 215 237 0.97

4 12 3.2e-06 0.00027 22.1 0.4 1 23 244 266 244 266 0.98

5 12 6.1e-06 0.0005 21.2 1.5 1 23 272 294 272 294 0.98

6 12 3.7e-06 0.00031 21.9 2.3 2 23 301 322 301 322 0.98

7 12 7.5e-08 6.2e-06 27.2 0.8 1 23 328 350 328 350 0.96

8 12 1.6e-05 0.0013 20.0 2.5 1 23 356 378 356 378 0.98

9 12 4e-05 0.0033 18.7 1.6 1 23 384 406 384 406 0.96

10 12 9.7e-06 0.00081 20.6 1.9 1 23 412 434 412 434 0.99

11 12 6.7e-06 0.00056 21.1 2.1 1 23 440 462 440 462 0.99

12 12 0.00018 0.015 16.6 2.2 1 22 468 489 468 490 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0035	0.29	12.6	1.8	1	23	135	157	135	157	0.98
2	12	2.6e-05	0.0022	19.2	0.6	2	23	162	184	161	184	0.94
3	12	9.5e-05	0.0079	17.5	0.8	2	23	216	237	215	237	0.97
4	12	3.2e-06	0.00027	22.1	0.4	1	23	244	266	244	266	0.98
5	12	6.1e-06	0.0005	21.2	1.5	1	23	272	294	272	294	0.98
6	12	3.7e-06	0.00031	21.9	2.3	2	23	301	322	301	322	0.98
7	12	7.5e-08	6.2e-06	27.2	0.8	1	23	328	350	328	350	0.96
8	12	1.6e-05	0.0013	20.0	2.5	1	23	356	378	356	378	0.98
9	12	4e-05	0.0033	18.7	1.6	1	23	384	406	384	406	0.96
10	12	9.7e-06	0.00081	20.6	1.9	1	23	412	434	412	434	0.99
11	12	6.7e-06	0.00056	21.1	2.1	1	23	440	462	440	462	0.99
12	12	0.00018	0.015	16.6	2.2	1	22	468	489	468	490	0.92

Sequence Information

Coding Sequence: ATGTTTGACGCTGCCAAGACATGCCGTACGTGTATGAAAACTGATGTTAATTTGGTCAGTCTATTCGATCCTTGGAATGTTGATGAAAATTCCTATTTCCAAGTTGCAGATGCACTTGCCGAAGTAACTACGACAcagATCGCTAGAGAAGATGGCTTGCCACAATGCCTTTGTGAACTCTGCTTTAAAACATTAGAAATGTCTTACACTTTCCGTAACCAAGCGCTAAAAGTagatttagaattaagaaaacTATTCCTTCTACAACCCAGTGTGAAGGCAGAACCTGAAGAAATTAAAAGTGAAGATGATTACACAGATGAGGCCACCGACTTTGATTATGTTAAAACAGAGGATGATGAAAGTCTTTATAAAATTGTCAGTGAAGCTACAAAACCCATATATGAATGCTACACATGCTCAAAACAATATAAAAGCAAGAAGGGGTATTTACAACATATAGCTTCACACAATGACAAATTACAATGCTCTGAATGCAACAAAAAATTTTCTCAACAAAATTCTCTCGATCTGCACATGTCTTTAGCCCACACCGGCATTGAAGAGATTTACACCGACAGAAACAACTCATATGAAAACAAAGAAGTGAAAACAGAGATCAAGACTGAATCAAATGACAAACTAGTATGTAAAATATGTGATCTACAATTTGAGAAACGCAGATCGTTAGCTAGTCATATGAAGAAGCATAGTGGTAGAAAGAAAAACTACATATGTGATGAATGCAATATGGTATTTAAGTCAAAGTCAGTGTTAGTGAGGCATATGAAGCTGCATACAAACATAAGACCTTACGAGTGTCAGCAATGCGGGAAACGGTACTCAAGAGTAGACCAGCTAAAGACACATGCGAAAAAACATAGCAGTACTAAAGCAAATGTCTGTCCTTATTGCAAAAAAGGGTTCAGTCAAATGTGTAACCTCCGGGACCACATCCGTACACATACCGGGGAGATTCCATACCTGTGTTCGGAGTGTGGGAAAGGATTCAACAACAGCTCTAACCTCAGACAGCACATGCTGCGCCACACTGGAGTCAAGCCATTCTCTTGCAATCTGTGTCCTAAGACATTCTGTACTAAAGGGCAAATGACGGTCCACCTGGACACACACACGGGCGCTCACCCGCACAAGTGTGAGCAGTGCGGCGCCTCCTTCACCAAGCCTCAGTCGCTGAAGAAACACTCGCTCATCCACCTGGGCGTCAAGCCCTATCAGTGCGACGTGTGCCCTAAAAGGTTCCTGGTGAAGGACCACCTGACACGCCACCAGCGAATTCACACGGGCGAGAAGCCCTACCGCTGCCAGTTCTGCGCGCGCGCATTCTCGCAGAGCAACGACATGACCAAGCATATGCGAACGCACGTCGGACAGAACATCTACCAATGCACAGTTTGCCAGCAACGTTACCGCACCCAAAACGACCTGAAAAAGCATTACCCCACACATTACATCAACGGGCTGGCCCCAGAGGCGGCCAAACAACTCACTGAAGACAACACCAATGCCCCTGACCAACCTGCTGTGGAACTTAACAATACATTGAACGGTTCTAAAGCTGCAATTGGTGGTACAAACCATGGAGTTAGTGGTACTGACAGTTCGATCATCGGCACAGATCATGGAATTAATGTAACGGACCAAAGGATCACTATAACATTCAATCCAGATATTGTAGACAAAGATACGGGGATAGCTGGATCCATTACTATTAATATGGACCCCGAGTTAGATTAG
Protein Sequence: MFDAAKTCRTCMKTDVNLVSLFDPWNVDENSYFQVADALAEVTTTQIAREDGLPQCLCELCFKTLEMSYTFRNQALKVDLELRKLFLLQPSVKAEPEEIKSEDDYTDEATDFDYVKTEDDESLYKIVSEATKPIYECYTCSKQYKSKKGYLQHIASHNDKLQCSECNKKFSQQNSLDLHMSLAHTGIEEIYTDRNNSYENKEVKTEIKTESNDKLVCKICDLQFEKRRSLASHMKKHSGRKKNYICDECNMVFKSKSVLVRHMKLHTNIRPYECQQCGKRYSRVDQLKTHAKKHSSTKANVCPYCKKGFSQMCNLRDHIRTHTGEIPYLCSECGKGFNNSSNLRQHMLRHTGVKPFSCNLCPKTFCTKGQMTVHLDTHTGAHPHKCEQCGASFTKPQSLKKHSLIHLGVKPYQCDVCPKRFLVKDHLTRHQRIHTGEKPYRCQFCARAFSQSNDMTKHMRTHVGQNIYQCTVCQQRYRTQNDLKKHYPTHYINGLAPEAAKQLTEDNTNAPDQPAVELNNTLNGSKAAIGGTNHGVSGTDSSIIGTDHGINVTDQRITITFNPDIVDKDTGIAGSITINMDPELD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01546841;
90% Identity: iTF_01546841;
80% Identity: -