Yevo006254.1
Basic Information
- Insect
- Yponomeuta evonymella
- Gene Symbol
- -
- Assembly
- GCA_963969515.1
- Location
- OZ018346.1:20047584-20061225[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.29 9.9e+03 -3.6 0.1 260 288 29 58 14 65 0.53 2 4 1.2e-49 4.3e-45 155.2 20.3 1 143 174 309 174 342 0.88 3 4 1.1e-24 3.7e-20 73.3 11.8 127 280 346 501 326 513 0.82 4 4 0.45 1.5e+04 -4.2 9.9 130 228 539 578 518 589 0.41
Sequence Information
- Coding Sequence
- ATGTCGAGATGCGAGTTAGAGCTGAATGAGCCCACAACTGTCAAAGAAGCTTTCCAATCGAGTGATAGCAACTTGTGGCGGCAAGCTATGCAAGATGAAGTTGATTCATTTAATAAGCATGAGGCTTGGGAGCTAGTTGACAGACCGGCAAATAAGAATATTGTTAAGAATCGGTGGATATTTAAAATCAAACGCGATGCTACTGGAAAAATAGTGTGTTATAGAGCGCGATTGGTTGCAAAGGGGTTTACCCAAAAGTTCGGAATCGACTATGTGGAAACGTACTCTCCAGTGGTACGACACAGCTCGTTAAGAATGCTATTGTCTCTTGCAGTCGAGTTAGATCTGAAGATTGATCACCTCGACGTAAAAACAGCCTTTCTGAATGGTAACTTGACAGAAGAAATTTATATGTCACAGCCAGAAGGGTTTATAAGAGAAGGCGATGAACATAAAGTCTACAGACTCAAGAAAGCCGTGTACGGGTTGAAACAGGCGTCTCGTGCCTGGTACGATAAGGCGGAGCAGCGgctggcggcgcggcgcgcggcacGCGCCGAGGCGCGCGAGATCCGCATGCGTGAGCTGGAGCGGCAGCAGCGCGAACAGGAGGACCATGCTGACAAGGCCTACGATATGTATGCAGAGACGGTGACgaggcgcggcggcgggcggctggCCTCGCTCACGCCGGCCGCGCTGCACTCGCCGCGCCGCAGCTCCGAGGACTCGCTCGACGAGAGTTTCAGCCTCAAGGAGCTGAGGCATGAACTGAAGGAAGTGGAGGAGAAGTTCCGCAAGGCGATGATTCTGAACGCGCAGTTGGACAACGACAAGGCGGCGCTCAACTACCAGCGCGAGCTGCTCAAGGACCGGATAGAGGAGCAGCGGGAGGAGATGGCGCAACTACAGGTGAGCTACAGCACTTACGCTACGAGCCTTACAGGGAGTGGAGGAGGCAAGGACCGGGTGGAGGAGCAGTCGAGGGAGCTGGCGCAACTACAGGTAGAGAATACGCAGCATGAACTGAAGGGAGTGGAGGAGCAGCGGGAGGAGATAGCGGAACTACAGCGCGAACACAAAGAGAAGTGCTCGGCGCACGAGCGCTTAAAACGCGAGCACGTCTCGCTGGAGCGCGAGCTTGAGGCGGCGCGGGACGCGGTGCGGGCGCgggacgccgccgccgccgccgccggacgCGCCTTCGTGGAGGCCTCGGCGGACACCGCGCCCGAACTGCAGGGCGCCAGCTTCGGCACCTGTCCGCCGCTCGCGCTCGTGTCGCGGGACACTGAGCAGTTACTGGGCGAGGCGGGAGAGGGGACGCTGGACGTGCGGTTGCAGAAGCTGATCGCGTCGAAGCAGGCGCTGGAGTCGGACGTTCGCAAGCTGAAGTTGCAGCTGCACGACGAGCGGGCGGCGCGCCAGAACGGGCAGGCCAACCACCACGAGCTCGAGTTTGAGAACGAATTGGAGTCGCTCCGCAAGTCGCAGGCGGAGGCGaaggcgcgggcggcgcgcgccgaGGCGGAGGCGGCGCTGCAGGGCGCGGCCGTCGCGCGGCTCGAGGCGCAGGTCGCCCGCCTGCGCGCGCAGCACGACGCGCAGGACTCCCACGAGGAGCAGCTCAAGCAGGAGCGCCGTCGGCTGCAGCGCGAGGCGCGCGAGGCCCAAAACCGCGTGGAAGAACTGGAGACGGAGAACAGTCACCTCAACAAGCGACTCGACAAACTGAAGAACGCCAAGTCTGCACTGCTCAAGGAGCTGTGA
- Protein Sequence
- MSRCELELNEPTTVKEAFQSSDSNLWRQAMQDEVDSFNKHEAWELVDRPANKNIVKNRWIFKIKRDATGKIVCYRARLVAKGFTQKFGIDYVETYSPVVRHSSLRMLLSLAVELDLKIDHLDVKTAFLNGNLTEEIYMSQPEGFIREGDEHKVYRLKKAVYGLKQASRAWYDKAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVTRRGGGRLASLTPAALHSPRRSSEDSLDESFSLKELRHELKEVEEKFRKAMILNAQLDNDKAALNYQRELLKDRIEEQREEMAQLQVSYSTYATSLTGSGGGKDRVEEQSRELAQLQVENTQHELKGVEEQREEIAELQREHKEKCSAHERLKREHVSLERELEAARDAVRARDAAAAAAGRAFVEASADTAPELQGASFGTCPPLALVSRDTEQLLGEAGEGTLDVRLQKLIASKQALESDVRKLKLQLHDERAARQNGQANHHELEFENELESLRKSQAEAKARAARAEAEAALQGAAVARLEAQVARLRAQHDAQDSHEEQLKQERRRLQREAREAQNRVEELETENSHLNKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -