Yevo027587.1
Basic Information
- Insect
- Yponomeuta evonymella
- Gene Symbol
- -
- Assembly
- GCA_963969515.1
- Location
- OZ018367.1:5044309-5044923[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-07 8.8e-05 23.0 0.0 2 34 11 45 10 54 0.88 2 2 8.2 3.6e+03 -1.3 0.0 2 13 111 122 110 124 0.84
Sequence Information
- Coding Sequence
- ATGCCAAAGATACCTAAAGCAAATTATTCCAAGGAACGGCTGGATGATGCCATTAAAGAGATACAAAATAACGTCCATAAATTATCTGTTCACCAAATATCAGAAAAGTATGGAGTACCGAGGACaagtttaaactttaaaatggcATTAGAAAAGAAGcaacaagaaaaagaagatgcaataaaacaaaaagaggaaaagaaattgaaaagagagaagaaaaagagtgaacaaaacaataaaacgaAGACCAAGGAAgagggaattaaaaaaagagcTGACAACACAAAAACGGAGGTGCCcgaatctaaaaaaataaatattttaagtgaaGATGTCCTGAAAAGAGCTGTGGATAGTTGTAGTGTGTGTCGAGCAAttatccaaaaaaatacaatcagcTGCAATAGTTGTGATAGAAAATATCATTTGCGTTGTATTCCAAAAAGACATAAGGATCATATCCCCGATGACTGTGATATGGATTTGTTTTTATGTCACATTTGTTATCAAATCGATTCATGTTCGGGTGGTTCAGATACTTGCGAGTCAGATGGTTCTGCTTCACAATTATACAATTACAACGATAAAGCTAAAAGGAATCTagactactaa
- Protein Sequence
- MPKIPKANYSKERLDDAIKEIQNNVHKLSVHQISEKYGVPRTSLNFKMALEKKQQEKEDAIKQKEEKKLKREKKKSEQNNKTKTKEEGIKKRADNTKTEVPESKKINILSEDVLKRAVDSCSVCRAIIQKNTISCNSCDRKYHLRCIPKRHKDHIPDDCDMDLFLCHICYQIDSCSGGSDTCESDGSASQLYNYNDKAKRNLDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01543875;
- 90% Identity
- iTF_01543875;
- 80% Identity
- iTF_01543877;