Yevo001592.1
Basic Information
- Insect
- Yponomeuta evonymella
- Gene Symbol
- -
- Assembly
- GCA_963969515.1
- Location
- OZ018343.1:1749942-1750556[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-07 8.8e-05 23.0 0.0 2 34 11 45 10 54 0.88 2 2 7.4 3.2e+03 -1.2 0.0 2 13 111 122 110 126 0.82
Sequence Information
- Coding Sequence
- ATGCCAAAGATACCTAAAACAAATTATTCCAAGGAACGGCTGGATGATGCCATTAAAGAGATACAAAATAACGTCCATAAATTATCTGTTCACCAAATATCAGAAAAGTATGGAGTACCGAGGACaagtttaaactttaaaatggcATTAGAAAAGAAGcaacaagaaaaagaagatgcaataaaacaaaaagaggaaaagaaattgaaaagagagaagaaaaagagtgaacaaaacaataaaacgaAGACCAAGGAAgagggaattaaaaaaagagcTGACAACACGAAAACGGAGGTGCCCGatgctaaaaaaataaatattttaagtgaaGATGTCCTGAAAAGAGCTGTGGATAGTTGTAGTGTGTGTCGAgcaattatcaaaaaaaatacaatcagcTGCAATAGTTGTGATAGAAAATATCATTTGCGTTGTATTCCAAAAAGACATAAGGATCATATCCCCGATGACTGTGATATGGGTTTGTTTTTATGTCACATTTGTTATCAAATCGATTCAAGTTCGGGTGGTTCAGATACTTGCGAGTCAGATGGTTCTGCCTCACAATTATACAATTACAACGATAAAGCTAAAAGGAATCTagactactaa
- Protein Sequence
- MPKIPKTNYSKERLDDAIKEIQNNVHKLSVHQISEKYGVPRTSLNFKMALEKKQQEKEDAIKQKEEKKLKREKKKSEQNNKTKTKEEGIKKRADNTKTEVPDAKKINILSEDVLKRAVDSCSVCRAIIKKNTISCNSCDRKYHLRCIPKRHKDHIPDDCDMGLFLCHICYQIDSSSGGSDTCESDGSASQLYNYNDKAKRNLDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01543876; iTF_01543877; iTF_01543880;
- 90% Identity
- iTF_01543876; iTF_01543877; iTF_01543880;
- 80% Identity
- -