Yevo014494.1
Basic Information
- Insect
- Yponomeuta evonymella
- Gene Symbol
- Pogk
- Assembly
- GCA_963969515.1
- Location
- OZ018354.1:13385275-13387380[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-08 7.5e-06 26.5 0.1 1 43 17 59 17 60 0.91
Sequence Information
- Coding Sequence
- ATGCCAAATAAATACAAGAGAAAAGCGGTAGCTATTAGAGGGAATTGGAGTGAAGAATCGTTAAAAGCTGCCATCATCGCTTTGAAAAATGCTGGAATGTCAGTTTATGCTGCTGCGAAAATGTACCAGATTCCAAGAAAAACTTTAGAAAGGCGTTTTAAACAGAATAACGACAAGAAAGGACCTATGGGTCCAAGCTCCTTATTTggcaaagaaaatgaaaataaacttgCAAACCATATCAAATCAATGCAAGCAAAAGGTTTTCCTTTAACGATTGAGGATGTTAGAAAAATAGCTTATCAGCTAGCTGAACAGTTACATTTAAAACACAGGTTCAACAAGGAAACTGAAAAAGCAGGCTACGactttgttaaattatttttaggaaGACATCCAGATATTACAATAAGAAAATCAGAAGGTGTTTCCTTAGCTCGATCAAATGCGATGAATAGACGGGAGGTAGATGCATACTTTAATCTCTTGGAAAATGTCCTGATGGTCGACGACGTAATGATGAAACCCAGTCACATATTTAATATGGACGAGACAGGACTACAATTAAATAACCGTCCAGATCATGTACTTGCTGCGAAAGGATCCAAGGCTGTGTCAACAGTTACATCAACAGAAAAGGGCGAAACGATTACTGTCATAGCATGCTGTAATGCTGAAGGTACATTTTTACCTCCAGCTTGTATTATgaaaggtaaaaataaaaaacctgagTTTGAAGATGGTATGCCTCCTGGATCAAAGGTTTTTATGTCCCCTAAGTCTGCATATATAACGTCAGCTATATTTTTAGAATGGATGAAAACACACTTCGTCCAAAGGAAACCTGCAGGAAAAGTCCTTCTCTTGTTAGATGGCCACTCTACTCATTGTAATTCCGTTGAAATGTTAGAATACGCAGAACAAAATGACATAGTGTTGCTGTCAATGCCTAGTCATACATCTCACTATCTTCAGCCCTTGGATCGTGCTGTTTTTAAGTCATTAAAAACCCATTTCTATGAACAATGTCGGCTGTGGCTGAAACAAAATTCTGGTCGTCGTATCACAAGACTGACATTTGGATCATTACTGAACAAAGCATGGGGAATAGCAGCTTGTGCTGAGAATGCTATTGCAGGGTTCAAAGCGACAGGAGTTTGCCCATATAATCCAAGTGCAGTTCCTGATTATGCTTTTACACTAGAATCAGTGGAAAACACATCTTTATCCCGCAATGACACTCCAGCTACAACTACCGTCCAGGTTGCAAGCGGTACCATCACTTCTGTATCTCCAAATCATGAACGAGATGAAGTTGCAGGAGCTTCAGTAGGACCAGATCGTGAGCTTGTCACTGATAATGAGTCATCTTCTAGTGTAGACGAACATCGAATGTTGAATGTAAGCCCGGAAATCTTACCAAAAAAAAGACCAAGGAACGCTTTGATACAGACTGGTGTAAATATTGCGGCAATGCTTCCGTCGACTTCAGCTACTCCACGTAAAGAAAAATGCGATAACATTCCAGATCTGACACCAACGCGAATTCTAAATGAAATATCTCCTGTACCTCAAAAACTAACAGAAGTACGCAAACGAGCTAAGCAAATTGGCACAATTTTGACATCAGCAGAACACATCAACATAAGAAAATGTAAAGAAGATGCTAAAAATGttaaagaattacaaatagctAAGAAGTTAAAAAGAGAAAACAAGACTGATTTAAAACTAAACAAgactgaaaatattaaaaaagaaaataagtctaataaaaaagaaaagaagattGAGAAGGAAACAATAAAGAAAAATGTtccgagaaaaagaaaatcgttACGAAGATTGTCTGATAGTAGCGACGATGATGAAGAACTAGTATTATGCGATGTTTCAGATGAAGAACGTGGAGGCGAAGAAAACATCTGTGTTGGCTGTGGCGAGAATTACTATGAAACACTTCTTGTCGAAGACTGGCTCCAGTGCAATATTTGTAAACTCTGGGTGCATGAAAATTGCACAGAGTTCGACGATATGTGCTCCAAATGTGGAAAAAAGATGAAACATGATCTCAAAAATAAGAGGTGCTTGGTACAAAAGGAGTAA
- Protein Sequence
- MPNKYKRKAVAIRGNWSEESLKAAIIALKNAGMSVYAAAKMYQIPRKTLERRFKQNNDKKGPMGPSSLFGKENENKLANHIKSMQAKGFPLTIEDVRKIAYQLAEQLHLKHRFNKETEKAGYDFVKLFLGRHPDITIRKSEGVSLARSNAMNRREVDAYFNLLENVLMVDDVMMKPSHIFNMDETGLQLNNRPDHVLAAKGSKAVSTVTSTEKGETITVIACCNAEGTFLPPACIMKGKNKKPEFEDGMPPGSKVFMSPKSAYITSAIFLEWMKTHFVQRKPAGKVLLLLDGHSTHCNSVEMLEYAEQNDIVLLSMPSHTSHYLQPLDRAVFKSLKTHFYEQCRLWLKQNSGRRITRLTFGSLLNKAWGIAACAENAIAGFKATGVCPYNPSAVPDYAFTLESVENTSLSRNDTPATTTVQVASGTITSVSPNHERDEVAGASVGPDRELVTDNESSSSVDEHRMLNVSPEILPKKRPRNALIQTGVNIAAMLPSTSATPRKEKCDNIPDLTPTRILNEISPVPQKLTEVRKRAKQIGTILTSAEHINIRKCKEDAKNVKELQIAKKLKRENKTDLKLNKTENIKKENKSNKKEKKIEKETIKKNVPRKRKSLRRLSDSSDDDEELVLCDVSDEERGGEENICVGCGENYYETLLVEDWLQCNICKLWVHENCTEFDDMCSKCGKKMKHDLKNKRCLVQKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932459;
- 90% Identity
- iTF_00791136;
- 80% Identity
- -