Haes002667.1
Basic Information
- Insect
- Hemithea aestivaria
- Gene Symbol
- Pogk
- Assembly
- GCA_947507615.1
- Location
- OX382342.1:3506209-3508314[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.8e-09 9.1e-06 25.9 0.2 1 43 17 59 17 60 0.92
Sequence Information
- Coding Sequence
- ATGCCAAATAAATACAAGAGAAAAGCGGTAGCTATTAGAGGGAATTGGAGTGAAGAATCGTTAAAAGCTGCCATCATCGCTTTGAAAAATGCTGAAATGTCAGTTTATGCTGCTGCAAAAATGTACCAGATTCCAAGAAAAACTTTAGAAAGGCGTTTTAAACAGAATAACGACAAGAAAGGACCTATGGGTCCAAGCTCCTTATTTGGCAAAGAAAATGAAAATAAACTTGCAAACCATATCAAATCAATGCAAGCAAAAGGTTTTCCTTTAACGATTGATGATGTTAGAAAAATAGCTTATCAGCTAGCTGAACAGTTACATTTAAAACACAGGTTCAACAAGGAAACTGAAAAAGCAGGCTACGACTTTGTTAAATTATTTTTAGGAAGACATCCAGATATTACAATAAGAAAATCAGAAGGTGTTTCCTTAGCTCGATCAAATGCGATGAATAGACGGGAGGTAGATGCATACTTTAATATCTTGGAAAATGTCCTGATGGTCGACGACGTAATGATGAAACCCAGTCACATATTTAATATGGACGAGACAGGACTACAATTAAATAACCGTCCAGATCATGTACTTGCTGCGAAAGGATCCAAGGCTGTGTCAACAGTTACATCAACAGAAAAGGGCGAAACGATTACTGTCATAGCATGCTGTAATGCTGAAGGTACATTTTTACCTCCAGCTTGTATTATGAAAGGTAAAAATAAAAAATCTGAGTTTGAAGATGGTATGCCTCCTGGATCAAAGGTTTTTATGTCCCCTAAGTCTGCATATATAACGTCAGCTATATTTTTAGAATGGATGAAAACACACTTCGTTCAAAGGAAACCTGCAGGAAAAGTCCTTCTCTTGTTAGATGGCCACTCTACTCATTGTAATTCCGTTGAAATGTTAGAATACGCAGAACAAAATGACATAGTGTTGCTGTCAATGCCTAGTCATACATCTCACTATCTTCAGCCCTTGGATCGTGCTGTTTTTAAGTCACTAAAAACCCATTTCTATGAACAATGTCGGCTGTGGCTAAAACAAAATTCTGGTCGTCGTATCACAAGACTGACATTTGGATCATTACTGAACAAAGCATGGGGAAAAGCAGCTTGTGCTGAGAATGCTATTGCAGGGTTCAAAGCGACAGGAGTTTGTCCATATAATCCAAGTGCAGTTCCTGATTATGCTTTTACACTAGAATCAGTGGAAAACACATCTTTATCCCAGAATGACACTCCAGCTACAACTACCGTCCAGGTTGCAAGCGGTACCATCACTTCTGTATCTCCAAATCATGAACGAGATGAAGTTGCTGGAGCTTCAGTAGGACCAGATCGTGAGCTTGTCACTGATAATGAGTCATCTTCTAGTGTAGAAGAACATCGAATGTTGAATGTAAGCCCGGAAATCTTACCAAAAAAAAGACCAAGGAACGCTTTGATACAGACTGGTGTAAATATTGCGGCAATGCTTCCGTCGACTTCAGCTACTCCACGTAAAGAAAAATGCGATAACATTCCAGATCTGACACCAACGCGAATTCTAAATGAAATATCTCCTGTACCTCAAAAACTAACAGAAGTACGCAAACGAGCTAAGCAAATTGGCACAATTTTGACATCAGCAGAACACATCAACATAAGAAAATCTAAAGAAGATGCTAAAAATGTTAAAGAATTACAAATTGCTAAGAAGTTAAAAAAAGAAAACATGACTGATTTAAAACTAAACAAGACTGAAAATATTAAAAAAGAAAAAAAGTCTAATAAAAAAGAAAAGAAGATTGAGAAGGAAACAATAAAGAAAAATGTTCCGAGAAAAAGAAAATCGTTACGAAGATTGTCTGATAGTAGCGAAGATGATGAAGAACTAGTATTATGCGATGTTTCAGATGAAGAACGTGGAGGCGAAGAAAACATCTGTGTTGGCTGTGGCGAGAATTACTATGAAACACTTCTCGTCGAAGACTGGCTCCAGTGCAATATTTGTAAACTCTGGGTGCATGAAAATTGCACAGAGTTCGACGATATGTGCTCGAAATGTGGAAAAAACATGAAACATGATCTCAAAAATAAGAGGTGCTTGGTAAAAAAGGAGTAA
- Protein Sequence
- MPNKYKRKAVAIRGNWSEESLKAAIIALKNAEMSVYAAAKMYQIPRKTLERRFKQNNDKKGPMGPSSLFGKENENKLANHIKSMQAKGFPLTIDDVRKIAYQLAEQLHLKHRFNKETEKAGYDFVKLFLGRHPDITIRKSEGVSLARSNAMNRREVDAYFNILENVLMVDDVMMKPSHIFNMDETGLQLNNRPDHVLAAKGSKAVSTVTSTEKGETITVIACCNAEGTFLPPACIMKGKNKKSEFEDGMPPGSKVFMSPKSAYITSAIFLEWMKTHFVQRKPAGKVLLLLDGHSTHCNSVEMLEYAEQNDIVLLSMPSHTSHYLQPLDRAVFKSLKTHFYEQCRLWLKQNSGRRITRLTFGSLLNKAWGKAACAENAIAGFKATGVCPYNPSAVPDYAFTLESVENTSLSQNDTPATTTVQVASGTITSVSPNHERDEVAGASVGPDRELVTDNESSSSVEEHRMLNVSPEILPKKRPRNALIQTGVNIAAMLPSTSATPRKEKCDNIPDLTPTRILNEISPVPQKLTEVRKRAKQIGTILTSAEHINIRKSKEDAKNVKELQIAKKLKKENMTDLKLNKTENIKKEKKSNKKEKKIEKETIKKNVPRKRKSLRRLSDSSEDDEELVLCDVSDEERGGEENICVGCGENYYETLLVEDWLQCNICKLWVHENCTEFDDMCSKCGKNMKHDLKNKRCLVKKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932459;
- 90% Identity
- iTF_01543862;
- 80% Identity
- -