Yevo029323.1
Basic Information
- Insect
- Yponomeuta evonymella
- Gene Symbol
- -
- Assembly
- GCA_963969515.1
- Location
- OZ018370.1:1192923-1194848[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-09 2.1e-06 28.3 0.1 7 38 21 52 17 56 0.93
Sequence Information
- Coding Sequence
- ATGGTCCGCACATACAAGAGGAAGACTGAACAGCATTCATGGTCTATGGAAGCTACGAAACAAGCTGTACACAGTGTTGTGTCCGCAGAAATGGGCTACAGGAAAGCAGCAAATATGCACAACGTTCCACAAACAACATTAGAACGTTATGTTTCTAAATATCGGGGCAATCCAGACGACAGCGtctttaaaaagaaattggGCCATTTCCATAGTGTGTTTTCTCCCGATCAAGAGAGAGaactaattaattacataaaactGATGGAAGCACGGTTTCATGGACTGACTTCACGTGACCTGCGCAAACTTGCATTTGAAGTGGCTCAAAAAAATGGAATTCCTCATAAATTTGATTCAGAGAGTGGTTTGGCAGGTATAGATTGGTTAAAAGGATTCCTTAAAAGACATCCAGATATTAGCTACAGAAAACCTGAACCAACATCAGCAGCTAGAGCTATGGGTTTCAATAGAGTAGCCGTTGAAagtttttttcaacttttagaAAAGGTTTACGATGAACATAAGCTTACTCCGCAAAGAATTTTCAATGTTGACGAGACAGGTGTGTCCACAGTGCCCAAAAGTCAATCTAAAGTCCTTGCTACCTGTAGCAAAAGGCAGGTAGGAACACTGACCTCCGCAGAAAGGGGAAAACTAATGACCACAATTCTCTGCTTCAGCGCAGTTGGCAACTATATGCCACCAATGTTCATATTTCCAAGGAAGCGTATGAAACCGGAGTTGCTTGATGGGGCACCAGCTGGGTCTTGGGGAGAATGTCACGAATCTGGGTGGATTCAGGGTCCCTTGTTTGTCCTCTGGCTTAAGAGATTCATTGAGTGGTCGCATTCCACCAAAAATAATCCAGTACTTTTATTGCTAGACGGTCATGCAACACACGTTAAATCTCTGGAGGTCATTGATTTGGCTCGCGAAAAtggtattattttattgtgcttTCCACCTCACTGCACACACCGACTCCAACCACTGGATGTTGGATTCATGAAACCTATAAGCACATATTATTCCAGCGAAATAAAGAATTGGTTGCGGTGCCATCCCGGCCGTGTGGTAACACAATTTCAGACAGCTGGACTATTCGGAAAAGCATTTGTATCTGCAGCAACAATGACGACTGCTATTAATGCATTCAGAGCCACAGGTATATGGCCCTTAAACAAGGATGTTTTCACTGACGCAGATTTTGCACCCGCGGACACTACAGATAATCCTGAGCCTGCTGAGGTGCCTTTAGTTAACGAAGCCATTTCGCAGAGAGACAACACTCCAGTGAGACAAGAAACCCCAGAAGGCGACCCTGGTGCCAAGACGCCACCCAGACAACCACTCCAAGAAATTTTGACCGGTAACAAGACACCACCATCGCAAATACCACAACAGGTGAGGAATATACAAACCCCACCTAGGCAACCTTCTCCACAACCTGGTTGTTCTTGGATGGTCGATAGGCCCTCGAGTTTTGCAACAACTCCAGAACAAATAATACCAGTGCCTAAGGAAAACAGAACAAGCAAAAGAGTTAGTAAGCAACGAGGGAAAACAGCAATCATCACAGAATCACCATACAAAAACGAGCTTCTAGCCATAAAAAAGGCCGCAGAACTCAAAGAACAGAAAAAGATGATAGCTAaagaattgaaattgaaatccaCTAAACAGAAGAAGAGAAAGGTTGTCAAAAAGAAAGGCAGTAAAAGCTCTGCAGAAGAAGTTGCTGATGCTGAAGATGCTGATGCTAAAGATGCTGAATGCATCTATTGTGGTTACTTGTGGTCAGAGTCAACCGAAGGATGGATACGTTGTCTAAAATGTTCTCGATGGGCACACTACTCTTGTGCTGGAGAGGATGAAAAAGATGAAGAGTCTACTCATTTATGTGCATTGTGCATTGAAAACTAA
- Protein Sequence
- MVRTYKRKTEQHSWSMEATKQAVHSVVSAEMGYRKAANMHNVPQTTLERYVSKYRGNPDDSVFKKKLGHFHSVFSPDQERELINYIKLMEARFHGLTSRDLRKLAFEVAQKNGIPHKFDSESGLAGIDWLKGFLKRHPDISYRKPEPTSAARAMGFNRVAVESFFQLLEKVYDEHKLTPQRIFNVDETGVSTVPKSQSKVLATCSKRQVGTLTSAERGKLMTTILCFSAVGNYMPPMFIFPRKRMKPELLDGAPAGSWGECHESGWIQGPLFVLWLKRFIEWSHSTKNNPVLLLLDGHATHVKSLEVIDLARENGIILLCFPPHCTHRLQPLDVGFMKPISTYYSSEIKNWLRCHPGRVVTQFQTAGLFGKAFVSAATMTTAINAFRATGIWPLNKDVFTDADFAPADTTDNPEPAEVPLVNEAISQRDNTPVRQETPEGDPGAKTPPRQPLQEILTGNKTPPSQIPQQVRNIQTPPRQPSPQPGCSWMVDRPSSFATTPEQIIPVPKENRTSKRVSKQRGKTAIITESPYKNELLAIKKAAELKEQKKMIAKELKLKSTKQKKRKVVKKKGSKSSAEEVADAEDADAKDAECIYCGYLWSESTEGWIRCLKCSRWAHYSCAGEDEKDEESTHLCALCIEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00710948;
- 90% Identity
- iTF_01264355; iTF_00247980; iTF_01526957; iTF_00445039; iTF_01091640; iTF_01543831; iTF_01543830; iTF_00121336; iTF_00121335;
- 80% Identity
- -