Ycag004055.1
Basic Information
- Insect
- Yponomeuta cagnagella
- Gene Symbol
- -
- Assembly
- GCA_947310995.1
- Location
- OX371296.1:8596534-8598195[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0015 1.5 9.5 0.3 13 43 83 110 76 111 0.91 2 14 0.0052 5.1 7.7 2.4 5 38 107 135 106 141 0.85 3 14 0.11 1.1e+02 3.5 1.5 15 38 145 165 139 171 0.72 4 14 0.0027 2.6 8.7 1.3 8 44 168 201 165 201 0.83 5 14 0.05 49 4.6 0.3 11 44 201 231 197 231 0.79 6 14 0.0011 1 10.0 2.0 12 44 232 261 227 261 0.85 7 14 3e-05 0.029 14.9 0.6 16 44 266 291 263 291 0.91 8 14 1e-06 0.001 19.6 1.4 4 43 322 358 319 359 0.93 9 14 0.0036 3.5 8.2 0.3 16 43 362 386 360 387 0.88 10 14 0.88 8.6e+02 0.6 4.4 18 44 394 417 384 417 0.79 11 14 0.072 70 4.1 3.0 6 29 411 434 408 448 0.79 12 14 8.4 8.2e+03 -2.5 2.0 18 26 451 459 434 470 0.79 13 14 0.33 3.2e+02 2.0 2.4 16 44 479 504 463 504 0.79 14 14 2.1 2e+03 -0.6 0.1 18 28 510 520 508 528 0.82
Sequence Information
- Coding Sequence
- ATGGAAGCAGTTTACATAAAACCGGAAGTACTGGAAGTCAAAGTGGAGACCAGCCAGGAGTCTTTTGACCCTTATCAAGATGTTGGTCAAGCATTTCAGACTGTAGATGTGAAGATGGAGCCCTATATGCAGGCATCTGAATCTTCAAGCTACATGGACATTTCGGAAATAAATGAAAACATAAATAATGGCCATGCCTCACATGCAAACCTAAGTGAAATTGACGCAAAGGTTTACGGCAATGGCAAAAGAAACAGAATACCATGCCCAAAATGCGAACAGACATTCAAGAACAGAGCCAACCTAAAGCAACATCTAAAATATGTGCATGCTACAGAGAATGATATTGTTGAATGCAAAATATGCTTCAGGACTTTCAAGTCTATATCCCATCTCCGATCACACAATTCATCTGTACACTTTGAGGAGGGAAAGGAGATAGTCTGCGAAACATGTGGCAAACATTTTGTCAGTCGTAAAAAGCTAAACAATCACATATTCTACTCACACCCGGAACCAACGGACCAAGTGAACTGTGCGACATGCTCCAAGACATTTAAAAGCAAATACAACTTGAAGGTCCACATGAGGCTCGTGCACCCAGCCACTGACAGCTCTGTCAAGTGCCCACAGTGTGACAAAGTGTTCAAAGTAGAAATGCTCATGTTGAGGCATCTGAAATGGAGTCACCCGACAGACGGAATGACTTACAAGTGCCAAATCTGTGGCAGAGTGTTGCCGTCCATATCCTGCTACAAAAAACACCTGGAAAATGTTCACAAGAGCTTAGAAGAGTTGGTCACTTGTGATTTGTGCCACAAAGTATTTAAATCTGTGACTAATCTGAAAATTCACTTGAAGATAGTACATTCAGACAAACCGTACGAGACTAAAGAATACAAGATGGGTCACTTGCCATGCTCGGAATGCGACAAACGGTTTTCCTCAAACACTGCCCTCCAGTGGCACTATGAACGGAACCACTCAGAGAATAGGCGCAGCACAACTTGCAATTTATGCCAAAAAGAGCTGTCAGATTTCAGTGGCCTAAAACGACACATGGGGATGGTGCATTCTGTTGAGAAGGCTACATGCTCCATCTGCCAAAAAGACTTCAAGTCTCCCATGAATCTGCAGAGGCATATAACGGTGACCCACGCTCCGCCGGAGGCTGCCCAGAACTGCGACATTTGTAAGAAAACCTTCAAATGCTCCATGCACTTGCGGGTACATGTAAACACTGTGCACAAAAAAGATGGAAAGAGCAACTGTGACATATGTAACAAAGAATTTGGCTCAAAGAAGTACATGCTGAAGCATAAAAAGACGCACATATTAACGCGAGAGTGTGCCTGCGGTGTCTGCGGTAAGCTCTACAGAAGCCCAGAGGATGTCAAAAAGCATTCTAAAAGGGTTCACAATAAAACGCCAATAGTTCACGAGTGTAATGTATGTCAAACTGCTTTTGCGACAGAACAGTGTTTGACTGAGCATGTGACCCAGTTTCACAGAGAAGGTGCTCAACTGAACTGCTTCAAATGTGGTCGCGTATTCTCGCAAGAGGCTGATTTGCACTCTCACATTCTGGAATGCGGCAGTGACGATGTGCAGAAAGAGCCACTGGCTTTAGTCAAAATTGAAATGGACATTTTAGAGTCTTGA
- Protein Sequence
- MEAVYIKPEVLEVKVETSQESFDPYQDVGQAFQTVDVKMEPYMQASESSSYMDISEINENINNGHASHANLSEIDAKVYGNGKRNRIPCPKCEQTFKNRANLKQHLKYVHATENDIVECKICFRTFKSISHLRSHNSSVHFEEGKEIVCETCGKHFVSRKKLNNHIFYSHPEPTDQVNCATCSKTFKSKYNLKVHMRLVHPATDSSVKCPQCDKVFKVEMLMLRHLKWSHPTDGMTYKCQICGRVLPSISCYKKHLENVHKSLEELVTCDLCHKVFKSVTNLKIHLKIVHSDKPYETKEYKMGHLPCSECDKRFSSNTALQWHYERNHSENRRSTTCNLCQKELSDFSGLKRHMGMVHSVEKATCSICQKDFKSPMNLQRHITVTHAPPEAAQNCDICKKTFKCSMHLRVHVNTVHKKDGKSNCDICNKEFGSKKYMLKHKKTHILTRECACGVCGKLYRSPEDVKKHSKRVHNKTPIVHECNVCQTAFATEQCLTEHVTQFHREGAQLNCFKCGRVFSQEADLHSHILECGSDDVQKEPLALVKIEMDILES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01545924;
- 90% Identity
- iTF_01545057;
- 80% Identity
- iTF_01543159;