Basic Information

Insect: Yponomeuta cagnagella
Gene Symbol: clz9_2
Assembly: GCA_947310995.1
Location: OX371271.1:842022-844154[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.5e-10 8.3e-08 32.4 0.0 1 39 16 55 16 60 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.5e-10	8.3e-08	32.4	0.0	1	39	16	55	16	60	0.91

Sequence Information

Coding Sequence: ATGGTGCGAAAATATAAAAAAAAGGGCACGCGTACTCAAGACGTGGATGAGGAGTCCATAAAATTAGCAGTTGACGACGTAATTCATGGACGCTTGTCGTATAGGAAAGCCGCGTTGAAATATAACATCAAGACCTCGACGTTGGAAAGCAGAGTCAAGAAATTCAAAGAAGGCTCTAACAGCGATGGGCCCTCACGAACATTTCATTCTAAGTTCACGAGTCTACAAGTCTTCTCCTTGGAAGAAGAGACACGCTTAAATGACTACATTATTAATTGCTGCAAAATGCATTATGGGCTAACAACAGTACAAATTCGCAAACTTGCCTACGAATACGCGAAAGCTTTAAATTTAAAATATCCCGCGAAATGGGATGAAAACCAAATGGCCGGCTTAGAGTGGATGCGTAAGTATAGAGAAAGAAACGCCAACCTCAGTCTGCGAAAACCGGAAAATACAAGCGCAGCTAGATCGTTCGCCTTCAATAAGACTGCAGTCCAGCAGTTCTATAATAATTTGGGTGATGTCTTACAGCGACATAATTTTGCTGCCGACAGGATATTTAACTTTGACGAGTCCGGCGTGTCTACAGTTTTAGATACTCCTAAAATTTTGGCTCCTAAATCACAGAAACAAGTGGGACAAATCGTGTCAGCGGAAAGAGGGGAGTTGATGAAATTTGGCGCAATTATTTCTGCAAGCGGAAATACTATCCCTCCGCTATTTGTATTTCCACGTGTACACTACAAGGACCATTTTCTAGAAGGTGCGCCTGAAGGAAGCATCGGAGCTGCTAATAGAAGTGGGTGGATAAATGCTGACATATTTGTTTCAGTATTAAAGCACATCCAGAAACACACACTGAGCTCTAAAGAGCATCCGATTTTACTATTATGTGATAATCACGAAAGCCATATCAGCTTACAGGCTATAACATATGCTCGAGATAATGGCATCATTTTTGTGTCTTTTCCCCCGCACACAAGTCATCGATTGCAGCCTTTAGACGTTGGAGTGTTCGGTCCATTCAAGGCAAAGTTGAAAATAGCGTTCAATAATTGGCATATGTCGAATCCTGGAAAAACAATCAACATTTATAATATACCCAAACTGGTAAAACTTGCATATTTTGAATCTTTTACCGCAAAAAATATTACAAGTGGATTTGAAAAGCCAGGTATATGGCCGTTCAATGAAATGGCCTTCAGTGATGAAGATTTCGCGCCCATTGACGTGTATGCTTCAAATAATTCGGTAAATGTGACACCTAATCCGGAAACAAGCACTGTCGCTCTTGAACTTCAACCTTCCACCAGCGTGCAGTCGACTGATATGAATGAGGCAGATATTCGTGAACAGTCGCCTTCTTTGCTCCAAAATCCTCAAGACATTTTTACCGGAACCGGTGAACCACAAGCGGCTGAGACACAATCTGAACCGAGTGCTTATCTTCCCATAACACCAGAAGTCATAAGACCTTATCCTACAGCTGTTAGAAACAGAAAAACAAATAAAGGAAGAAAACCGGGTAAATCCCGTATATATACAGATACACCTGAAAAAACTGAACTAGAAGAGAGACATAGACAGAAAGAATTGAAAAAAATAGAACAGGAAAGGAAAGCCAGAGCCAAAGCAGTGAAACGTAGTTTGAAGGAACTTAATTCAAGACAAAAGAAAAAGAAAGCAAAGCAAATAGAAAGTGATGAAGATTCAGAGGAATCTGAAGGATCGCAATTTAGCTTGCGTGAAAGTTCAACATCTCCAATCAATTTCGAAACGGATGAAGAGACTGATGATCGTAGTATCCATAATAATTTAAATGTGACACCAGAGAAAATCAAAGATGATTGTTTTGTTTTGGTAAAGTTTGAAAAAAAGACTTCTGTTGTTTATTACGTCGGAAAAGTTCTCAGTCACTATTCGGGTACAGAGCTGAAAATATCTTATCTTCGGAAGAAACCGGGATCATCATGGTCATTCTTTTTCCCTGTTATAGAAGACATACACACTCTGTATATCAGTGATGTCGCCATGATCCTCCCTGATCCAGAACCAAGAGCGGGCTGTACAGCTAGAATGGCTAGACTTTTTACTTTTTCAGTTAATTTAAATAATTATAATGTGCAATAA
Protein Sequence: MVRKYKKKGTRTQDVDEESIKLAVDDVIHGRLSYRKAALKYNIKTSTLESRVKKFKEGSNSDGPSRTFHSKFTSLQVFSLEEETRLNDYIINCCKMHYGLTTVQIRKLAYEYAKALNLKYPAKWDENQMAGLEWMRKYRERNANLSLRKPENTSAARSFAFNKTAVQQFYNNLGDVLQRHNFAADRIFNFDESGVSTVLDTPKILAPKSQKQVGQIVSAERGELMKFGAIISASGNTIPPLFVFPRVHYKDHFLEGAPEGSIGAANRSGWINADIFVSVLKHIQKHTLSSKEHPILLLCDNHESHISLQAITYARDNGIIFVSFPPHTSHRLQPLDVGVFGPFKAKLKIAFNNWHMSNPGKTINIYNIPKLVKLAYFESFTAKNITSGFEKPGIWPFNEMAFSDEDFAPIDVYASNNSVNVTPNPETSTVALELQPSTSVQSTDMNEADIREQSPSLLQNPQDIFTGTGEPQAAETQSEPSAYLPITPEVIRPYPTAVRNRKTNKGRKPGKSRIYTDTPEKTELEERHRQKELKKIEQERKARAKAVKRSLKELNSRQKKKKAKQIESDEDSEESEGSQFSLRESSTSPINFETDEETDDRSIHNNLNVTPEKIKDDCFVLVKFEKKTSVVYYVGKVLSHYSGTELKISYLRKKPGSSWSFFFPVIEDIHTLYISDVAMILPDPEPRAGCTARMARLFTFSVNLNNYNVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01542887; iTF_00902977; iTF_00902978; iTF_00179121; iTF_00667330; iTF_01416706; iTF_01416709; iTF_01416710; iTF_01416711; iTF_00428036; iTF_00428035; iTF_00636229; iTF_00771812; iTF_00237448; iTF_00237410; iTF_00237409; iTF_00237408; iTF_00783372; iTF_00783373; iTF_00783374; iTF_01429868; iTF_00677486; iTF_00784335; iTF_00072688; iTF_01303250; iTF_00654183; iTF_01192596; iTF_00008864; iTF_00908754; iTF_01060562; iTF_01542885; iTF_01028202; iTF_01546573; iTF_01151153; iTF_01151154; iTF_01341138; iTF_01341139; iTF_01341141; iTF_01341142; iTF_01341143; iTF_01341144; iTF_01341145; iTF_01341209; iTF_01341146; iTF_01385658; iTF_01386644; iTF_01509526; iTF_01509527; iTF_00018105; iTF_00156185; iTF_01509530; iTF_01083263; iTF_01055904; iTF_00637494; iTF_00637493; iTF_00910518; iTF_00056471; iTF_01091688; iTF_00667327; iTF_00122295;
90% Identity: iTF_01341138;
80% Identity: -