Basic Information

Insect: Helicoverpa assulta
Gene Symbol: clz9
Assembly: GCA_029618815.1
Location: CAWLCW010000012.1:6139623-6141746[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.6e-10 1e-07 32.4 0.0 1 39 16 55 16 60 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.6e-10	1e-07	32.4	0.0	1	39	16	55	16	60	0.91

Sequence Information

Coding Sequence: ATGGtgcgaaaatataaaaaaaagggcACGCGTACTCAAGACGTGGATGAGGAGTCCATAAAATTAGCAGTTGACGACGTAATTCATGGACGCTTGTCGTATAGGAAAGCCGCGTTGAAATATAACATCAAGACCTCGACGTTGGAGAGCAGAGTCAAGAAATTCAAAGAAGGCTCTAACAGCGATGGACCCTCACGAACATTTCATTCTAAGTTCACGAGTCTACAAGTCTTCTCCTTGGAAGAAGAGACACGCTTAAATGACTACATTATTAATTGCTGCAAAATGCATTATGGGCTAACAACAGTACAAATTCGCAAACTTGCCTACGAATACGCGAAagctttaaatttaaaatatcccgcgAAATGGGATGAAACCCAAATGGCCGGCTTAGAGTGGATGCGTAAGTATAGAGAAAGAAACGCCAACCTCAGTCTGCGAAAACCGGAAAATACAAGCGCAGCTAGATCGTTCGCCTTCAATAAGACTGCAGTTCAGCAGTTCTATAATAATTTGGGCGATGTCTTACAGCGACATAATTTTGCTGCCGACAGGATATTTAACTTTGACGAGTCCGGCGTGTCTACAGTTTTAGATACTCCTAAAATTTTGGCTCCAAAATCACAGAAACAAGTGGGACAAATCGTGTCAGCGGAAAGAGGGGAGTTGATGACATTTGGCGCAATTATTTCTGCAAGCGGAAATACTATCCCTCCGCTATTTGTATTTCCACGTGTACACTACAAGGACCATTTTCTAGAAGGTGCGCCTGAAGGAAGCATCGGAGCTGCTAATAGAAGTGGGTGGATAAATGCTGACATATTTGTTTCAGTATTAAAGCACATCCAGAAACACACACTGAGCTCTAAAGAGCATCCGATTTTACTATTATGTGATAATCACGAAAGCCATATCAGCTTACAGGCTATAACATATGCTCGAGACAATGGCATCATTTTTGTGTCTTTTCCCCCGCACACAAGTCATCGATTGCAGCCTTTAGACGTTGGAGTGTTTGGTCCATTCAAGGCAAAGTTGAAAATAGCGTTCAATAATTGGCATATGTCGAATCCTGGAAAAACAatcaacatttataatatacccAAACTGGTAAAACTTGCATATTTTGAATCTTTTActgcaaaaaatattacaagtgGATTTGAAAAGCCAGGCATATGGCCGTTCAATGAAATGGCCTTCAGTGATGAAGATTTCGCGCCCATTGACGTGTATGCTTCAAATAATTCGGTAAATGTGACACCTAATCCGGAAACAAGCACTGTCGCTCTTGAACTTCAACCTTCCACCAGCGTGCAGTCGACTGATATGAATGAGGCAGATATTCGTGATTCGCCTTCTTTGCTCCATAATCCTCAAGACATTTTTACCGGTGAACCACAAGCGGCTGAGACACAATCTGAACCGAGTGCTTATCTTCCCATAACACCAGAAGTCATAAGACCTTATCCTACAGCTGTTAGAAACAGAAATACCAATAAAGGAAGAAAACCGGGTAAATCCCGTATATATACAGATACACCTGAAAAAACTGAACTAGAAGAGAGACATAGACAGaaagaattgaaaaaaatagaacaGGAAAAGAAAGCCAGAGCCAAAGCAGTGAAACGTAGTTTGAAGGAACTTAATTCAagacaaaagaaaaagaaagcaaAGCAAATAGAAAGTGATGAAGATTCAGAGGAATCTGAAGGATCGCAATTTAGCTTGCGTGAAAGTTCAACATCTCCAATCGATTTCGAAACGGATGAAGAGACTGATGATCGTAGTAtccataataatttaaatgtgaCACCAGAGAAAATCAAAGATGGTTGTTTTCTTCTGgtaaagtttgaaaaaaagacTTCTGTTGTTTATTACGTCGGAAAAGTTCTCAGTCACTATTCGGGTACAGAGCTGAAAATATCTTATCTTCGGAAGAAACCGGGATCATCATGGTCATTCTTTTTCCCTGTTATAGAAGACATACACACTCTGTATATCAGTGATGTCGCCATGATCCTCCCTGATCCAGAAACAAGAGCGGGCTGTACAGCTAGAATGGCTAGACTTTTTACTTTTGCagtaaatttaaataattataatgtgcaataa
Protein Sequence: MVRKYKKKGTRTQDVDEESIKLAVDDVIHGRLSYRKAALKYNIKTSTLESRVKKFKEGSNSDGPSRTFHSKFTSLQVFSLEEETRLNDYIINCCKMHYGLTTVQIRKLAYEYAKALNLKYPAKWDETQMAGLEWMRKYRERNANLSLRKPENTSAARSFAFNKTAVQQFYNNLGDVLQRHNFAADRIFNFDESGVSTVLDTPKILAPKSQKQVGQIVSAERGELMTFGAIISASGNTIPPLFVFPRVHYKDHFLEGAPEGSIGAANRSGWINADIFVSVLKHIQKHTLSSKEHPILLLCDNHESHISLQAITYARDNGIIFVSFPPHTSHRLQPLDVGVFGPFKAKLKIAFNNWHMSNPGKTINIYNIPKLVKLAYFESFTAKNITSGFEKPGIWPFNEMAFSDEDFAPIDVYASNNSVNVTPNPETSTVALELQPSTSVQSTDMNEADIRDSPSLLHNPQDIFTGEPQAAETQSEPSAYLPITPEVIRPYPTAVRNRNTNKGRKPGKSRIYTDTPEKTELEERHRQKELKKIEQEKKARAKAVKRSLKELNSRQKKKKAKQIESDEDSEESEGSQFSLRESSTSPIDFETDEETDDRSIHNNLNVTPEKIKDGCFLLVKFEKKTSVVYYVGKVLSHYSGTELKISYLRKKPGSSWSFFFPVIEDIHTLYISDVAMILPDPETRAGCTARMARLFTFAVNLNNYNVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01542886;
90% Identity: iTF_01341138;
80% Identity: iTF_00783373;