Ycag007080.1
Basic Information
- Insect
- Yponomeuta cagnagella
- Gene Symbol
- kn
- Assembly
- GCA_947310995.1
- Location
- OX371281.1:7180555-7206658[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.5e-44 7.7e-41 140.6 0.6 182 249 12 79 7 88 0.93 2 3 3.9e-31 2e-27 96.3 0.1 336 387 88 139 86 142 0.97 3 3 0.00047 2.5 6.9 0.5 421 459 149 191 140 207 0.59
Sequence Information
- Coding Sequence
- ATGCCCACCGCGGATTGGAAATTTCAAGCGCTGAGATTTTTCCTCAAATTCTTCCTAAAATGCAATCAGAACTGTCTGAAGAACGCTGGCAATCCTCGAGACATGAGGAGGTTTCAGGTGGTGATATCAACGCAAGTGATGGTCGACGGGCCACTACTAGCCATATCAGACAACATGTTCGTTCACAACAACAGCAAACATGGCCGACGCGCCAAGCGTCTAGATCCGACTGAAGGTATAGACGCCGCCTCCGAATCACCTTCACTCAACGAGCCAACGATAGATTACGGCTTCCAGAGATTGCAGAAACTCATACCGAGGCATCCCGGGGACCCAGAAAAACTACCCAAGGAAATCATTCTCAAGCGAGCGGCGGACCTAGCAGAGGCACTGTACTCGATGCCTCGGAATAACCAACTAGGCTTAGGGGGTCCACGATCACCTCCTTCGAGTATGCCCTTCAATTCATACACTGGCCAGTTGGCAGTCAGTGTTCAGGATGCCGCGGCTAGCCAATGGACTGAAGGAATGAGCGGACTAGTCTCCTCGCCGTTCAGCGTTAACCCATTCTCTCTGCCCACGTGTAACGCCCAGCAGTATGCCCAGACCGCGCCTCTGGTCTCCAAGTAA
- Protein Sequence
- MPTADWKFQALRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAASESPSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGGPRSPPSSMPFNSYTGQLAVSVQDAAASQWTEGMSGLVSSPFSVNPFSLPTCNAQQYAQTAPLVSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01501873;
- 90% Identity
- iTF_01542666;
- 80% Identity
- iTF_01542666;