Tjac015601.1
Basic Information
- Insect
- Tyria jacobaeae
- Gene Symbol
- kn
- Assembly
- GCA_947561695.1
- Location
- OX387220.1:6971051-6989381[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.9e-45 6.3e-41 140.8 0.5 181 251 30 99 15 105 0.93 2 3 3.1e-32 4.1e-28 98.6 0.1 335 387 106 158 98 163 0.96 3 3 0.00038 5 5.8 0.3 421 460 168 209 159 226 0.60
Sequence Information
- Coding Sequence
- ATGCAATTTAATGAGTTGATAGTGTGCGTTAACCCTCGCTACGTTTGCAAATACGACTTTCTTTGTTTGAACGATATTGGACTTTATACTTGGTTTTTTTTGAAGTTCTTTCTGAAGTGCAACCAGAATTGTTTAAAGAACGCTGGCAACCCACGGGATATGAGAAGATTTCAGGTGGTAATATCAACGCAAGTAATGGTGGATGGTCCTCTGTTAGCGATATCAGACAACATGTTTGTACACAACAACAGCAAGCATGGCCGACGAGCAAAGAGATTAGATCCTAGCGAAGGTACAGACGCCGTGACTGACAATACTTCGTTGAACGAACCAACGATAGATTATGGCTTTCAGAGACTACAGAAACTTATACCGAGACATCCCGGGGATCCGGAAAAATTGCCGAAGGAAATAATCCTAAAACGTGCAGCAGACTTGGCAGAGGCGCTTTACTCAATGCCACGCAACAATCAACTTGGGCTCGGAGCACCTCGTTCGCCGCCATCGAGCATGCCTTTCAACTCGTACACCGGCCAGCTAGCGGTGAGCGTGCAGGACACTGCAGCCTCGCAGTGGACTGAAGGAATGGGCGGTCTAGTCTCTTCACCTTTCAGCATGAATCCATTCTCATTGCCAACATGCAATTCTCAGCAGTATGCCCAAACAGCTCCTCTTGCGTCTAAGTAG
- Protein Sequence
- MQFNELIVCVNPRYVCKYDFLCLNDIGLYTWFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGTDAVTDNTSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPSSMPFNSYTGQLAVSVQDTAASQWTEGMGGLVSSPFSMNPFSLPTCNSQQYAQTAPLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01542666; iTF_01542744; iTF_01501822;
- 90% Identity
- iTF_01501822;
- 80% Identity
- iTF_01501822;