Basic Information

Insect: Xylota segnis
Gene Symbol: -
Assembly: GCA_963583995.1
Location: OY757237.1:11528054-11529810[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0081 0.62 10.7 1.6 2 22 198 218 197 221 0.89

2 10 5.6e-05 0.0043 17.4 5.6 1 23 225 248 225 248 0.97

3 10 0.063 4.8 7.8 0.4 3 23 255 275 253 275 0.92

4 10 0.0021 0.16 12.5 0.5 2 23 281 302 280 302 0.94

5 10 0.00092 0.07 13.6 4.1 1 23 310 332 310 332 0.98

6 10 9.8e-07 7.4e-05 23.0 1.8 1 23 338 360 338 360 0.99

7 10 1.3e-05 0.00097 19.5 0.8 3 23 367 387 365 387 0.96

8 10 2.4e-05 0.0018 18.6 3.1 1 23 393 415 393 415 0.99

9 10 5.6e-05 0.0043 17.5 0.7 1 23 420 442 420 442 0.93

10 10 0.0001 0.0078 16.6 2.2 1 23 447 470 447 471 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0081	0.62	10.7	1.6	2	22	198	218	197	221	0.89
2	10	5.6e-05	0.0043	17.4	5.6	1	23	225	248	225	248	0.97
3	10	0.063	4.8	7.8	0.4	3	23	255	275	253	275	0.92
4	10	0.0021	0.16	12.5	0.5	2	23	281	302	280	302	0.94
5	10	0.00092	0.07	13.6	4.1	1	23	310	332	310	332	0.98
6	10	9.8e-07	7.4e-05	23.0	1.8	1	23	338	360	338	360	0.99
7	10	1.3e-05	0.00097	19.5	0.8	3	23	367	387	365	387	0.96
8	10	2.4e-05	0.0018	18.6	3.1	1	23	393	415	393	415	0.99
9	10	5.6e-05	0.0043	17.5	0.7	1	23	420	442	420	442	0.93
10	10	0.0001	0.0078	16.6	2.2	1	23	447	470	447	471	0.96

Sequence Information

Coding Sequence: ATGGAAGAATACGTAATAGAGCTCCCGGTGTGCAGAGTGTGCCTTCAAACCGCAGTAGAATGTATTGAAATGGATTCCCTCATGATGAACGAAAGTGGCGATGAAGAATCTCAAACGTATTTCCAGTGTTTCAAGTCGTGTACAAATTTAGACATTAAAGAAAATGATGGCCTACCGAAGCTTATTTGTTCCCTATGTTCCATTGAATTACGAGCCACTTACGAATTCATTGCTAAGGCCAAGAACTCCCATGATATATTGCTAATGCAATTAGAGGACGTAAAATCAGAGTACATTGTACATGAATATGACACACATATAAATGATCTATCTGAGGAAGCGATATATCTGCCGATCGAAAATGTGGATGAAATTtttgaaGAAGAGACTGATGGGTTTTGCTTTAtggaaatgaaagaagaaagtaTTGGGGGAGAAAATAAAGCAAAGGATGATGATCAAGAAGATGAAAGACAACTCAGTGAAAGTGAAGTAATCGTGAATCCATCTGAGACGAACTCTGAaaccgaagaacgaacagaagaatcGAATGAAGAAACAAGAGGACGCGATGGATCTCAGGATACAATTAAGTGTAATTTATGCCATTTGAAATTCGACAACTTGGAGGATTTAAGGGAGCATGGGGATTATGAACACCATCACATACCATTTAGTTGTTCGATCTGCTTTCATCGTTTTAGCAGTAAGTACTCTCTTACAGACCACATGAAAAGGAAGCACGACGGATCATATGTCAACTGTGATATATGTGGAACATCAGTGAAAAGGACTTTCTTGCGCGCACACAAAAGACAGGTCCACAGAAAAACACCCTTTCTTTGCTCGGCTTGCCCGCGTACGTTTAAAACCACAACGGGTCTTCAAATACATTCCGAGACTCACAAAGAGAATCGTCAACGAAATTTTGAGTGTGAACAGTGTCATAAGAAATTTCTAACCGAACGAACGTACAAAGTGCATATACGGACCCACTGGCACCGGGAGCCTTTCAAATGTAGCCTTTGCGACAAGCAATTCATGCAAAAGGTCAATCTTCGGCTGCATATGCAAATGCATCGTGGTGAGACTATGGACTGCGTTTATTGTGACAAAAAGTTTGTTCGCAAAACTGATTTAAGTGTGCACTTGCGTTTTCACACGGGAAATTTCCCGTACGAGTGTCAGTACTGTGATAAACGTTTTGCGATTGTAAGTCATTTGAATTACCATCAGAAGCGTCATCAAGGATTTATCTACAAGTGTGATGTGTGCGATAAGGAATTCATCAATATGTCTGGCTTAAGAAATCATTCGTTTCAGCATACGGCGATGCCGTTCAATTGTGCTGTTTGTGACAAGggattcccaacgaaatttaAAATAAAACGGCACTTAAAGACAGTCCATCATGTGTTGGATTCTGAGGAGCTCGAACGCTGCATTACAACAgagaaaattaaattggaaCCAAGCATTGAAGAAGCTACTGAAGTGGTATTGGTGGAAGAAGTTGAAGGAGAATAG
Protein Sequence: MEEYVIELPVCRVCLQTAVECIEMDSLMMNESGDEESQTYFQCFKSCTNLDIKENDGLPKLICSLCSIELRATYEFIAKAKNSHDILLMQLEDVKSEYIVHEYDTHINDLSEEAIYLPIENVDEIFEEETDGFCFMEMKEESIGGENKAKDDDQEDERQLSESEVIVNPSETNSETEERTEESNEETRGRDGSQDTIKCNLCHLKFDNLEDLREHGDYEHHHIPFSCSICFHRFSSKYSLTDHMKRKHDGSYVNCDICGTSVKRTFLRAHKRQVHRKTPFLCSACPRTFKTTTGLQIHSETHKENRQRNFECEQCHKKFLTERTYKVHIRTHWHREPFKCSLCDKQFMQKVNLRLHMQMHRGETMDCVYCDKKFVRKTDLSVHLRFHTGNFPYECQYCDKRFAIVSHLNYHQKRHQGFIYKCDVCDKEFINMSGLRNHSFQHTAMPFNCAVCDKGFPTKFKIKRHLKTVHHVLDSEELERCITTEKIKLEPSIEEATEVVLVEEVEGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01542446; iTF_01223716; iTF_00241694;
90% Identity: iTF_01542446;
80% Identity: -