Xseg008382.1
Basic Information
- Insect
- Xylota segnis
- Gene Symbol
- retn
- Assembly
- GCA_963583995.1
- Location
- OY757237.1:92156165-92180636[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.31 7e+02 0.7 0.0 41 65 99 124 93 136 0.75 2 2 7.2e-21 1.6e-17 63.7 0.0 2 79 268 343 267 344 0.93
Sequence Information
- Coding Sequence
- ATGACACTCAATTGTGTCGCAGCACGCGTGCCCATGTTGTACAAATCAAACTGCGATTCAAATGATTGCCCTGAGTCCAACGACGAACACTCTGAGGACGACATGAGGGACTGCGAGTCGGTTGATGACGAGAATACCAGCCGATTAAACGCATCGATGGTCAACGGTCTGGGTATGGACTATGGAGGTATCGGTGGTGGCAGGAGTCCAGAACAACACAACGCAGAAATTCCAATGAGTCACCATCATGCACAGTTCGCCACGAATCATCCGCTGGGCGCACTGGGAAATTTCATGAGCATGGGCGGATTGCACAGTATCCCAAATCTGCAACAGCAGCACAATGATGTGCTGGAGAAACTGAAGATGCAGGTCCGTGATATGAAAGTCGGCCTGATGGACCAGGAATATCCAGCACATGGAAACTTTGGCTCAAACGTCATTCCAACCCCCATCAATACAGCGTTCACAATCCCGTCAACTTCTCACACGTCGTTCAATCACTCCCCGCAGAATTTATCGCAGCCGTCACCGCAGCCGCAGCAAACCATGCTATCTAcgcaccaacagcagcaacagcagcagcagcaacagtcgCAATCACATACGAGTTCCCAATCGATGCCGAATGGCTTCTCGTTCACGTCGCCCTCAGCCCCAAGCACAAAAGACGtAAATCCTGCCTCTAATTCATCTACGTCCAGCGAAACATCCAACTCTTCACAGCAGAACAATGGCTGGAGTTTTGAGGAACAGTACAAACAAGTTAGACAGCTCTATGAAATAAATGATGACCCTAAGCGCAAGGAGTTCCTCGATGACTTGTTTTCCTTTATGCAGAAGCGAGGAACGCCAATAAATCGCTTACCGATCATGGCAAAATCAGTGCTCGATCTTTACGAGCTTTACAATTTGGTAATAGCGAGAGGCGGGCTCGTGGACGTGATTAACAAGAAACTATGGCAGGAGATCATCAAGGGGCTGCATCTGCCGTCGAGCATTACCAGTGCTGCATTTACCTTGCGCACGCAGTAA
- Protein Sequence
- MTLNCVAARVPMLYKSNCDSNDCPESNDEHSEDDMRDCESVDDENTSRLNASMVNGLGMDYGGIGGGRSPEQHNAEIPMSHHHAQFATNHPLGALGNFMSMGGLHSIPNLQQQHNDVLEKLKMQVRDMKVGLMDQEYPAHGNFGSNVIPTPINTAFTIPSTSHTSFNHSPQNLSQPSPQPQQTMLSTHQQQQQQQQQQSQSHTSSQSMPNGFSFTSPSAPSTKDVNPASNSSTSSETSNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00694378;
- 90% Identity
- iTF_00315723;
- 80% Identity
- -