Xseg004575.1
Basic Information
- Insect
- Xylota segnis
- Gene Symbol
- Rel
- Assembly
- GCA_963583995.1
- Location
- OY757236.1:128634207-128639325[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.7e-33 2.5e-29 102.4 0.0 1 168 14 197 14 198 0.91 2 2 4.2e-32 1.1e-28 100.4 0.0 2 168 301 483 300 484 0.91
Sequence Information
- Coding Sequence
- ATGCTTGAAGGTGCAGAATGTAATCATAATCACATTCATTTGGTTATACTAGAACAACCAGTCGAACTGTATCGATTTCGCTATGAACTTGATTTGCGTCCAAAACTTGGAATATGTGGCGAACGATCGAAACCGAGTGCGGTAACATTTCCTACTGTGGAACTTAGAAACTTCAATGGCCTAGGAGTGATCCGTTGCAGTTTGTTTCAAACAAATATGGACAAACCATCGCCGCATCCACACAAATTGGTAGTAAGCAGGGTTGGATTGGATGACTGTGATTCAAAGAATTTTTACGTTTCTCCTGAATTGGGTTACACAGCAAGGTTTGAGAATGTGAAAGTAATCCACACCTATAAGAAGGACATTGTCGATGTGCTTTATgcgaaaaagaaggaaagattcaaatttgaatcGAGACGTGCTGTGCTGACCCCGATGGAGGAGAACCAACTGAAATATGAAGCAGAAAAGGAGAAGCAAATGATCAACTTAAATCAGGCTCGCCTCTACTTCGAAGCACTTGAACTTGGAGACGATAATATCTGGAGTCGAATCGCTGAGCCGGTCTTTTCGAACATAATCTACGACTACAAATGTCCCGACACACATTTCTTGAAGATCTATCACCTCAGTACAGCCAcagctggtgctgctggtggtgacGAAGTGACAATTTTGACCGAAAAACTCAACACGGAAAGCATAAAAGTTCGTTTCTTTGAGTTGGATGGTGACCATGAAGTTTGGGAGGCATTCGGAGAGTATTTTGATCATCATGGGTATGCTCTCGTTGTGCGGACACCGCCTTATAAGAATCAGGATATCTGTACAAACGTGAAAGTTTTCATCCAACTAGTGTGCACTAGCGAGGGCGCAGAGTGTAACAACATTCATATGGTTGTGCTGGAACAACCGGCCGAAGTGCATCGCTATGGTTTTGAATGTGAGATGATGCGTCGCAATTGGATAAATGGCGAGCGATCGAACGCGACTGAGAAAACATTTCCTGAAGTGGAACTTCGAAATTTTAATGGTAAAGGAGTGATCCGCTGCAGTTTGTTTCAAACAAATATGAATAAACCATTGCCGCATCCACATAAGTTAGTAGCATGGAAGGATGCATTGGAACACTGTGATCCACTGGATGTTTATGTTTCTCGTGAACTGGGTTACACGGCTAGACTTGAGCGCATAAGAATAATACAAACTCTTCGAAAGAACATTGTCAATGTGCTCTATACGAAGAAGATGAaaagatttaaatttgaatCGGGGCGTGGGGTGCTGTCGGAAGAGGAGGAAAATCAACTGAAAGATGAAGCAGAGAAGGAGAAGCCAACTATCAACTTACGTGAGGCTCGCCTCTACTTCGAAGCTTTTGAAATTGACGAAGATAACGTCTGGAGACGAATCGCTGAACCTGTGTTTTCGAACATAATATACAACTACGTCCGCCGCCCCCTGAAGATCTGTCATCTCAGTACAATAAACGCTGGCGCTGCTGGTGGGGACGAAGTGactattttgattgaaaaactcAGCACGGAAAACATAAAAGTTCGTTTCTTTGAGTTGGATGGTGACCATGAAGCTTGGGAGGCATTCGGAGAGTATTTTGAGCATCATGGGTACGCTCTCGTTGTGCGGACCCCGCCTTATAAGAATCAAGATATCCATACAAACGTAGATGTCTTCATCGAACTAGTTCGAACTCATGAAGGAAGTATCGACCGGAGTCTGCCTGTCTCTTTCCAATATAAACCATCAGATGTGTCCCATTCCAAGTGA
- Protein Sequence
- MLEGAECNHNHIHLVILEQPVELYRFRYELDLRPKLGICGERSKPSAVTFPTVELRNFNGLGVIRCSLFQTNMDKPSPHPHKLVVSRVGLDDCDSKNFYVSPELGYTARFENVKVIHTYKKDIVDVLYAKKKERFKFESRRAVLTPMEENQLKYEAEKEKQMINLNQARLYFEALELGDDNIWSRIAEPVFSNIIYDYKCPDTHFLKIYHLSTATAGAAGGDEVTILTEKLNTESIKVRFFELDGDHEVWEAFGEYFDHHGYALVVRTPPYKNQDICTNVKVFIQLVCTSEGAECNNIHMVVLEQPAEVHRYGFECEMMRRNWINGERSNATEKTFPEVELRNFNGKGVIRCSLFQTNMNKPLPHPHKLVAWKDALEHCDPLDVYVSRELGYTARLERIRIIQTLRKNIVNVLYTKKMKRFKFESGRGVLSEEEENQLKDEAEKEKPTINLREARLYFEAFEIDEDNVWRRIAEPVFSNIIYNYVRRPLKICHLSTINAGAAGGDEVTILIEKLSTENIKVRFFELDGDHEAWEAFGEYFEHHGYALVVRTPPYKNQDIHTNVDVFIELVRTHEGSIDRSLPVSFQYKPSDVSHSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -