Xare006216.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xylocampa areola
Gene Symbol
-
Assembly
GCA_935412865.1
Location
CAKXYQ010000189.1:483070-491469[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 5.8 4.5e+02 2.1 1.1 1 23 54 77 54 77 0.94
2 21 0.026 2.1 9.4 4.1 1 23 84 107 84 107 0.97
3 21 4.9 3.8e+02 2.3 4.0 1 23 192 214 192 214 0.96
4 21 0.0017 0.13 13.2 1.0 2 23 220 241 219 241 0.97
5 21 2 1.6e+02 3.5 1.4 1 23 247 269 247 270 0.94
6 21 0.2 16 6.7 3.4 2 22 512 532 511 532 0.95
7 21 0.083 6.5 7.9 2.6 1 23 629 651 629 651 0.95
8 21 0.58 45 5.2 0.3 2 23 787 808 786 808 0.96
9 21 0.0019 0.14 13.1 0.5 2 23 889 910 888 910 0.96
10 21 0.13 9.9 7.3 0.3 1 23 918 940 918 940 0.97
11 21 4.8 3.8e+02 2.3 2.6 1 23 976 998 976 998 0.93
12 21 0.00023 0.018 15.9 4.0 1 23 1006 1028 1006 1028 0.99
13 21 0.1 7.9 7.6 1.8 1 23 1113 1135 1113 1135 0.99
14 21 0.016 1.2 10.2 0.1 1 23 1186 1208 1186 1208 0.97
15 21 0.059 4.6 8.3 0.2 2 23 1215 1236 1214 1236 0.97
16 21 0.26 20 6.3 0.7 1 23 1303 1325 1303 1325 0.95
17 21 0.0053 0.41 11.6 1.1 1 23 1331 1353 1331 1353 0.96
18 21 0.0065 0.51 11.4 2.6 1 23 1443 1465 1443 1465 0.97
19 21 0.00016 0.013 16.4 1.4 1 23 1471 1493 1471 1493 0.99
20 21 0.32 25 6.0 2.9 1 23 1586 1608 1586 1608 0.96
21 21 0.018 1.4 9.9 2.8 3 23 1622 1642 1621 1642 0.99

Sequence Information

Coding Sequence
ATGCTACAGCAGATGTCCTCGCCGCCGAGCGTACAAGTCGGCGAGGTCGCGACTATCGTGCGCCACCTTGAAGGCCGCGTCTGCGGCGACGTGTCTTCAGAGGCTTCCTCGGACGCCGCAGAAGATTCGGAATTACCACAGTGCAAGATAAGAAGGAATTATAATTGCACCAAGTGCACGTTCTATACGCAGAACCCGCGCGCTTATCTCCTCCACACGCGTGACGCTCACTTTGTTAAACTTAAGATTTACGATTGTCCACACTGCGTTTACGCTTCGAGGCATCATCAGAAACTTATAAGGCATATCAAAATGGTCCACACCGTCCACGGAGGATCAAAGCCGACATCGACTGCTGGTAAACTAGATGTTGAGTTATCACCTCCCTCATATGATAACACGGAGCAAGCAGAGCGCATCGAAGACTTACTAGAGGAAGTCGAAGACTGTGAGGATATGATGATGGAGGTGGATGAGGACTCTTCTGAGCGTCCCGAAGACGTTGATGTCGATTGCGATAGAAGTGTTGAGCAACCAGCGCCCTCTGATGTATCAAAAAATAAAGGCAAATTTTTCTCTTGCGATAAATGCAACTACGTAACCCACATAAGAGCTAGATTCACAAAGCACGTCAAGTATCATTCGATGCCTATGATCAAGTGCACAATGTGTGATTTCCGAACACCATACAAATGGAATTTGGACCGTCACATGAAGAACCACGGTGGAAGTGGAAGTTTCAATTGTTCGATGTGCAACTTTACGGCGGACATCAAGCAGAGTCTGACGGTGCACGAAATGAATCATCACACACCGCCAGCGGGCCAATCGCTGTCGAGTCGCCGCCGCAACCGGGTGGGTGCTAGCGACACGGTTATCGCGGAGTTCGACGCAGCGAGCGCGTTGCTCCCCAAGGAGGAAGAAGGGAGCGGCGACTCGCGGTCCTCACACACGGTCTCGGACATGGGGCTACAATACGCAGAAAGAGAAATTGCCGGATGCAAAAGTGATTCCAATGACGGTACGGCTTCGGATGCAAATATCAGAAAAGATGCTTCGAGCCTGTCACAGGATGGATACAATCAGCTTTCACCTCACAGCGCAGATGAGAAGTCACAAAAACAAAATAGAAAAATTCCTAGACCAATACCACAACTCATACCTCTAAATTCGTCAACCCCTAACCAAAAACAAACATGCTCAGGTGAACCGCCTAACAAAAAGTTCAAGGAATCTTTGCCATCTGAAACAGATGATTTCAATTTAGGAAGTAGGATTGAAGATGGTGATATAAGTTTATTTGCCGTAAATCCATCAATAAAAGAAACTGTAGGTCGTAAGAAAAATGAATCATTCTTCGATAGATTAAAAGAAAGACTATTAACAGAAACAGGGGAAGAAGGGTCTCTTATATGCAAAAATTGTGGTTTTGAAAGTAAGTGTTTATCGGAACATTCTGTACATGAAAAAAATTGCTCACAACACGCAACCCGGATAAATGCAAACACATCGCTTACAAGTTTAAGTTCAACTCGCTGCCAAAATTGCAGACACAGATGCAAATCTAGCGCCGATTTGTACATTCACATGCAAACTTGTGGAAAAACTGAAAAGATAGAGGATGAAAATACTTTCAAAAATCAAGATAGTAATGATGCAGTCATTCCAATCCATGAAAAAGAGACTGAACCACATCCAATGGAAAACGTCGTTTTCGTTTGGAATAATATTAATCATGACACTAATAAGTTTGATATACCTCTAGATATAAATATAAATGATGATTGCACTCTACCAGAAATGCATAGAAATTTTGATCCTGAGATTATCGATGAAAATGAAACTATGAATTTGTCGCCGAGTCAAGCTGTTGGTAGAAAGGTATTTAAATGTCCACATTGTCCATTTTTCTCCACAACAGCGTCCAGATTTCACGTTCATATTGTGGGTCACCTAAACAAAAAACCTTTTGAATGTTCCCTCTGCAAATATAAATCTAATTGGAGGTGGGATATAACGAAACACATTAAATTAAAATCAGCGAGAGATCCAGATCATAACGATGCAAAAGTATTGATGACTGATGAAACAGGGAGAAGAAACTACAGCAAATATAACAAATTCTTAGCAATGCCAATTTTAAATGAGAACGGGGAGAATGAGTTCCATTACCTGGAGCCCAACACATCTATCGATGGTACCATGGATATGGACGAATCATTCAATGATATATCAGACGTTATGAATGTACAATTTGAAATGCAACCGCTTAACTTACAGACTCAACACAATGAAGATAAGTACGAATTTGATAACAGAGGTCTAAATGATCTGAAGAAACCGAAGAAAACATTATGGAAATGTAAAAAATGTAATTACAAGGATCCCTCAAAAGAAGCTCTGTTGGAGCATGTTCGTGAACACTCCAGATCCGATGGTATCCACGACGAATCAAACAAACAACCTATTGCCAAGAAAGTTGAAAATAATACTCCCGATCCTGCAGACTTAGCATATCGATGTGGTCACTGTAATCAATTGTCTAATTGGAAACATGTCATCCAGCGCCATTGCCGGTTGAAACACGATGGAGTGATTAAAGTCATAACTACAGTTAAACCAAAACCAGATCCGCCAATGAACATCAATGAGATCAACATTGACACTTGTAACAAGTGTCCGTACAGATCTAGTGACAAAAAACTACTTATTGCTCATTTGCAACAACATCAGCCTTCGCCTAACTCAATATTTAAGTGCTATTTCTGCCCATTCTTCGTAAAAGATGAACCTGAATTAATACAACATCTTCTCCTTCACGGTATCACTGACCCAGAAGATTACATTGCAAAGGCAATGGGAACTAAATCACCAACGGCAGAGCTGCACACACCTGCTACTCCATCATTAAACTCCAATAAACGTCACAAATGTATAGAGTGCCCCTATGAAACTAACAGCAAGTCGCAATTCATGTACCACGAACAATTCCACCGACTTCCTGCCGATACCCCTTATAAATGTCCAGAGTGCAACTACAGCGTATCTAAGAGACACCTGCTGCACCAACACCTGCGAGTTCACGGAATAGCAATCAAGAGAATGGAAACCGAGGCCGACTTAGAGGCATCGACGTCCACACAAAATAAGACAGATCTGAAAGTTGACTTTCACATTAATCTAGATGAAATACCATATATTTGGGTTTCAGCGAAGAACGAGTTTCATAAAATGTACAAATGCCGGTACTGTTCGTACGTAAATTCTCAAAAATGTAACATTCCAAATCATGAAAAAATTCATTTCATCGTATTCGAAAACAATGACACAACTTTTTACAAGTGTTTGGAATGTAAATTTACCTGTGATAATGCCGCTAGACTAGCAGAGCATTCCAAAACCCATGGCGAAATATATGGGCGAATTTATTGTCCCGTTGAAGATGATGTTCCGGATGATGAACAGATTGCCAAATTAAGAAAAGTTATAGAAATAGAAAAATCATCGAATCCAGAAAGTTTTTCTAGGGAAGACGATAGAGAATATAAATTATTATATTTTTGTCAAAAGTGCCCAGCAAGATTTTTTGATGATGGTGAATTAGAAGCCCATGTCAAGTTACATGATGAAACGCTTCCGAATAAGTGTAAAAGTTGTGATTTTTCAGTCTCTGAGGAAAGTGAATTGGCAGCGCATTATACTGTTCACACAGATGTATATCACACAAAAACGAAGATGCTTAAATTTATTCACAGCTCACATTCTTCGCATAGAGGACCCATACTAGAACCTGTTCACTGTCCAGAGACTTCAGAAGTCACGTGGATAGCTACTGGTCCAAGTAAAGTTGAAAATATCGAAATTTCGATAAAAAGGTCAAATGACATAAAACACATGCCAAAACAATATTACTGCAAAAGATGCCCAGCCAAGTTTTTAAAAAATTCGGCCCTTAGCTATCACATGGGACTACATGGAGGAGAAGGCGAACATAAGTGCAAGAAGTGTAATTACGCCGTGAAGAATATTGGAAACTTGGCTAAACATGAATTATTACACGAACATGAAAACAAATCTACAAATTGTGATTACGAATCTGGTGAAGATATGGACTATAAAAATATTCCATTGTCGGGTACAGATCTGTTCCAGAGAAAGACTGAGGCTCAGAAAAGGGTCTTAAATGATAAAGATAAGTTAGTTAAGCCGAATGATCATTTTCCACCTGTATTACAAGCCGATCCTCAATTCGGTTATTTGATGCATGGAAATCCTGAATTTATATATCCCACGTATCTTAAAAATGGTCGGCAGAAAGAAAAGCGATATAAATGCCATAAATGCCCCTCAGCATTTGAAAAAAGGGAACAATATAAAATTCATTTATCATTACATGGTTCTAAACAAAGATACAAATGTGAATTATGTGATTATTCAGTCAAATATTATGCAAATTACGTTCAACATATGAGAAAACATCAAATGAATGATGAAGCTCAAGCTGAAAGAAAAAAAGGTAGTATTGATTTTACAGAATCTGAAAATCAAGAAGATGTTAAACCAGACGACAGTAGTGATAATATTAAACTTGCAATAAAAACTATGCCTAAAGGTGCTCCCAGGACCGACTTCCAACAGTTCTCAATAAGTGACCAGCAAACACTCCGTTTACTGCAACGAAGACGGTCAATGAACAATACTACTGGCAAGGACATAAATACATCTGAAACTTCGCCAACAAAAGAACGTAAAATGCACATGTGTTTATTGTGCCCCTATACTAATCAACGTCAAGATTCCTTAACTAATCATTACAGAAGGCACGGTGACACCGACGTGCTTAGCGCAGGCAGCCATAAACTATGTTCTCACTGTGACCTAGTAGTTGTTCAGTCGCACTTCCTGCGAGAACATCTGAAAACGCATTTTAATTACCACAAAACTCAGATTCCTGAATGTTTTGTGGCTAACGAAGATGTTACTTTTACCATAACTAAGTTGGATGAAGAGAGTGATCCAGTTGATCTCAAATTAGACATGCAAAACAAGGGCTTTGCATGTACTGACGAAAAAATATTTGTGAAAATAAAAACAGGAGAACTATTATGGGTGGAATAA
Protein Sequence
MLQQMSSPPSVQVGEVATIVRHLEGRVCGDVSSEASSDAAEDSELPQCKIRRNYNCTKCTFYTQNPRAYLLHTRDAHFVKLKIYDCPHCVYASRHHQKLIRHIKMVHTVHGGSKPTSTAGKLDVELSPPSYDNTEQAERIEDLLEEVEDCEDMMMEVDEDSSERPEDVDVDCDRSVEQPAPSDVSKNKGKFFSCDKCNYVTHIRARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGSGSFNCSMCNFTADIKQSLTVHEMNHHTPPAGQSLSSRRRNRVGASDTVIAEFDAASALLPKEEEGSGDSRSSHTVSDMGLQYAEREIAGCKSDSNDGTASDANIRKDASSLSQDGYNQLSPHSADEKSQKQNRKIPRPIPQLIPLNSSTPNQKQTCSGEPPNKKFKESLPSETDDFNLGSRIEDGDISLFAVNPSIKETVGRKKNESFFDRLKERLLTETGEEGSLICKNCGFESKCLSEHSVHEKNCSQHATRINANTSLTSLSSTRCQNCRHRCKSSADLYIHMQTCGKTEKIEDENTFKNQDSNDAVIPIHEKETEPHPMENVVFVWNNINHDTNKFDIPLDININDDCTLPEMHRNFDPEIIDENETMNLSPSQAVGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPDHNDAKVLMTDETGRRNYSKYNKFLAMPILNENGENEFHYLEPNTSIDGTMDMDESFNDISDVMNVQFEMQPLNLQTQHNEDKYEFDNRGLNDLKKPKKTLWKCKKCNYKDPSKEALLEHVREHSRSDGIHDESNKQPIAKKVENNTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDPPMNINEINIDTCNKCPYRSSDKKLLIAHLQQHQPSPNSIFKCYFCPFFVKDEPELIQHLLLHGITDPEDYIAKAMGTKSPTAELHTPATPSLNSNKRHKCIECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIAIKRMETEADLEASTSTQNKTDLKVDFHINLDEIPYIWVSAKNEFHKMYKCRYCSYVNSQKCNIPNHEKIHFIVFENNDTTFYKCLECKFTCDNAARLAEHSKTHGEIYGRIYCPVEDDVPDDEQIAKLRKVIEIEKSSNPESFSREDDREYKLLYFCQKCPARFFDDGELEAHVKLHDETLPNKCKSCDFSVSEESELAAHYTVHTDVYHTKTKMLKFIHSSHSSHRGPILEPVHCPETSEVTWIATGPSKVENIEISIKRSNDIKHMPKQYYCKRCPAKFLKNSALSYHMGLHGGEGEHKCKKCNYAVKNIGNLAKHELLHEHENKSTNCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLNDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGSIDFTESENQEDVKPDDSSDNIKLAIKTMPKGAPRTDFQQFSISDQQTLRLLQRRRSMNNTTGKDINTSETSPTKERKMHMCLLCPYTNQRQDSLTNHYRRHGDTDVLSAGSHKLCSHCDLVVVQSHFLREHLKTHFNYHKTQIPECFVANEDVTFTITKLDEESDPVDLKLDMQNKGFACTDEKIFVKIKTGELLWVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01231174;
90% Identity
-
80% Identity
-