Xare011063.1
Basic Information
- Insect
- Xylocampa areola
- Gene Symbol
- Ssb-c31a
- Assembly
- GCA_935412865.1
- Location
- CAKXYQ010000360.1:189545-191079[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-28 2.5e-24 85.0 0.9 1 51 43 93 43 94 0.96
Sequence Information
- Coding Sequence
- ATGCCTAAAAACAAGAAGCAAGAAAGCTCCAGCAGTTCTGATAGTGATGATGGACCTGTCGACAGAAACCCACCACCAGAAAAGAAAGCCAAAATGGGCAGTAGAACACAGGACAAAGAGCCAACATGGGTTTTACAAGGGAAAAAACTAGTTAAAGTCAGGGAGTTCAAAGGCAAGGTATATGTAGATATAAGAGAATTCTATGAAAAGAATGGTGATTTGTTACCTGGTAAGAAGGGCATCAGTATGACACCTGAGCAGTGGAGAAAACTGATATCTTTGGGTGATGAAATAAATGAAACACTAAGTTCCTTATGCTAA
- Protein Sequence
- MPKNKKQESSSSSDSDDGPVDRNPPPEKKAKMGSRTQDKEPTWVLQGKKLVKVREFKGKVYVDIREFYEKNGDLLPGKKGISMTPEQWRKLISLGDEINETLSSLC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01076532;
- 90% Identity
- iTF_01027361; iTF_01030273; iTF_01028328; iTF_01425097; iTF_00952747; iTF_00951870; iTF_01416811; iTF_01416810; iTF_00383693; iTF_00000368; iTF_01221606; iTF_00001208; iTF_01363139; iTF_00273635; iTF_00177162; iTF_00809174; iTF_00810103; iTF_00327114; iTF_01173311; iTF_00185344; iTF_00186211; iTF_01026224; iTF_00049938; iTF_01076532; iTF_00723990; iTF_01029303; iTF_01031178; iTF_00017370; iTF_00018197; iTF_01377504; iTF_00850780; iTF_01230620;
- 80% Identity
- -