Xare004480.1
Basic Information
- Insect
- Xylocampa areola
- Gene Symbol
- -
- Assembly
- GCA_935412865.1
- Location
- CAKXYQ010000131.1:903925-917658[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-11 7.1e-07 29.3 0.0 4 76 44 118 42 128 0.86
Sequence Information
- Coding Sequence
- ATGTACGTGAATAGTAACCTCATTCTAAATTTTCGGTACGACAAGTGGGACCGGGACAGGGGCGGGGGGAGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGTGGGGGGGCTGGCGCGTGGGCGGGCCGCGACCGCGAGCGCGATCGGGAGCGCGAGCGACAGGCGCGCGCGCACCAGATGTCGCAGGCGCACGCCGCCGAGCCCGACGCATCGTCGCTCTTCCCGGCGCCGATCAGGGTGACAGGCAACAGGGACCGCGTCAGCCAGCAGATCCAGACGAAGCTCGGCGACTACCACCTCGCGCAGTGGTTCATCGATGACCCCAGCAAATCCATCGGGATCTGCGCTGAACCACCCAGTCCTGCACCATGTGAGTACAATAGAAACTAG
- Protein Sequence
- MYVNSNLILNFRYDKWDRDRGGGSGGGGGGGGGGGGAGAWAGRDRERDRERERQARAHQMSQAHAAEPDASSLFPAPIRVTGNRDRVSQQIQTKLGDYHLAQWFIDDPSKSIGICAEPPSPAPCEYNRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01172388; iTF_00055431; iTF_00390380; iTF_01415852; iTF_00171769; iTF_00638655; iTF_00761689; iTF_01416793;
- 90% Identity
- iTF_00375235; iTF_01093110; iTF_00924695; iTF_00383672; iTF_00171769; iTF_01192729;
- 80% Identity
- -