Xare009568.1
Basic Information
- Insect
- Xylocampa areola
- Gene Symbol
- -
- Assembly
- GCA_935412865.1
- Location
- CAKXYQ010000308.1:47855-48187[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-11 1.5e-08 34.6 0.1 3 37 17 51 15 56 0.94 2 2 3.8 2e+03 -0.9 0.0 9 19 51 61 51 62 0.83
Sequence Information
- Coding Sequence
- ATGGTACGAACGTATAAGAAGAAAAGTTCGAGACTTAGTTGGTCCACGGAAAACATGAAACAGGCAATTGATGCAGTCTTAAGCAAAACTGCTGGCTATAGAAAAGCAGCTCACCTGTATAGTGTACCTCAGACCACATTAGAGCGTCACGTCGCTAAAATAAGGAAAGGCGAGCTGTCTCTTGACTCTACTCCAGGTAACTTCAAGCCCGTGTTTTCCAAACAAGAAGAAGAGGAACTGGTAAAGTACATTATAGAAATGGAGAAACGTTTGTTTGGTTTAACCACTATCGTCTTACGGAAGCTAGCTTATCAGCTAGCGGAAAAAAATTGA
- Protein Sequence
- MVRTYKKKSSRLSWSTENMKQAIDAVLSKTAGYRKAAHLYSVPQTTLERHVAKIRKGELSLDSTPGNFKPVFSKQEEEELVKYIIEMEKRLFGLTTIVLRKLAYQLAEKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00064359; iTF_01157608; iTF_01024781; iTF_00925657; iTF_01538671; iTF_00876085; iTF_00874382;
- 90% Identity
- iTF_01538671;
- 80% Identity
- -