Xcam022178.1
Basic Information
- Insect
- Xiphydria camelus
- Gene Symbol
- BTBD2
- Assembly
- GCA_963678675.1
- Location
- OY783201.1:12993065-13001610[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-27 7.1e-25 87.8 0.0 4 109 142 248 139 249 0.94 2 2 3.7 1.4e+03 -0.0 0.0 78 108 249 279 246 281 0.84
Sequence Information
- Coding Sequence
- ATGTCATCGGAGGATTCTTTAGATGAACTACAAAATACTTCATCCAGATTGAACACAATGCGCCTGGATAGCGACGAGGGAGACGATGTACAAAATGTAGACGCCGATGGGGATGCTTCGTCGGCATCCCCGCAAAATATGCAACCTGCTGGAAATGTTGCCTATTCGCGTATACGGCGTGCTCTAGCTTTTGTATGCGACGAAGAACAACCTTCCGCGTCGCAATCTCGAAATGGAGAAGCTTCCGCATCTGGCTGTGACAACCGGCCGCCCAGTAATTCAGGAAATGCATTGCACTTGGAAATAAGACAAATCCCCCCTGCCCTCGTAATTTCGGATAACATCCCTGCTCATCGTTTGCCAGCACCAGCCGCTTACAACTGGCAAGGAAGCAAAGCAACTATGCGTGAgagatttgcatttttattcAACAACGAAATACTATCCGACGTGAGCTTCCTCGTCGGACGGGGAGCGCAACAGCAACGCATTCCCGCGCACAAATTGGTATTGTCATCGGGAAGCGCCGTATTTGATGCCATGTTCAACGGGACGCTTGCTACTGCTTCCGACGAAATAGAGGTTCCCGACGTCGAGCCGGCGGCGTTTCTCGCCGTGCTACTTTTTCTGTATACCGATGAAATACAAATCGACCCCGAAACCGTAATGACGACGCTCTACACCGCAAAGAAATATGCGGTGTCCCCCTTGGAAAAGCACTGCGTTGATTTCCTGAGGAACAATCTGACCAGCGACAACGCGTTTCTGCTTCTCACTCAAGCGCGTCTCTTCGACGAACCGCAGTTAGCTGCGGTGTGTCTGGATACCATTGACAAATTTACTACCGATGCTCTCAACGCGGATGGATTCACTGATATCGACATCGACACTTTAATGGTTGTTTTGGAAAGGGACACGCTTCGCGTGAGGGAGTCAAAAATCTTTCACGCCGTTATCAGATGGTCCGAAGCCGAATGTGCGAGACAACAATTGCCGGTAACCCCGGAAAATCAACGATCCGTTTTGGGTAGAGCTCTTTCTCTAGTGAGATTTCCGTTGATGTCTGTGGAGGAGTTTGCTGTTGGTGCGGCTCAATCTGGTCTTCTTACGGATCGCGAAGTCGTTTCGTTATTCTTATATTTCACATTGAACCCAAAGCCAGCCGTAGGATTTGAAGCGATGCCGCGATGTCGCATGATGGGCAAAGAACAGACCGTATGTAGATTCCAACATACGGAGACTAGATGGGGATATAGTGGCACGAGCGATCGAATCAGGTTTAGCGTAGACAGACGTATATTTCTCGTTGGATACGGTGTTTACGGAAGTATTCATGGGCCCGCGGAGTATCGCGTACTGATAGAACTGATACATACGGCTTCTGGTAAAGTCATCGCTGCCAATGAAACCGGCTTTAGTTGTGACGGATCGAGCTACACGTATCGATTGATGTTCAAAGAACCGGCTGAGATTTTACCTAAGACGGTTTACACCGCATCGGCGACGTTTCAGGGACCTGACTCTTATTATGGTACGAAAGGTTTGCGAAAAGTCATGATAGACAGCGATTCCGATCACGGGAAAGTCGAATTTCAATTCAGCTACGCGGCAGGCCACAATAATGGAACGTCGATCGAAGATGGTCAAATTCCCGAACTTATATTTTACACGTAA
- Protein Sequence
- MSSEDSLDELQNTSSRLNTMRLDSDEGDDVQNVDADGDASSASPQNMQPAGNVAYSRIRRALAFVCDEEQPSASQSRNGEASASGCDNRPPSNSGNALHLEIRQIPPALVISDNIPAHRLPAPAAYNWQGSKATMRERFAFLFNNEILSDVSFLVGRGAQQQRIPAHKLVLSSGSAVFDAMFNGTLATASDEIEVPDVEPAAFLAVLLFLYTDEIQIDPETVMTTLYTAKKYAVSPLEKHCVDFLRNNLTSDNAFLLLTQARLFDEPQLAAVCLDTIDKFTTDALNADGFTDIDIDTLMVVLERDTLRVRESKIFHAVIRWSEAECARQQLPVTPENQRSVLGRALSLVRFPLMSVEEFAVGAAQSGLLTDREVVSLFLYFTLNPKPAVGFEAMPRCRMMGKEQTVCRFQHTETRWGYSGTSDRIRFSVDRRIFLVGYGVYGSIHGPAEYRVLIELIHTASGKVIAANETGFSCDGSSYTYRLMFKEPAEILPKTVYTASATFQGPDSYYGTKGLRKVMIDSDSDHGKVEFQFSYAAGHNNGTSIEDGQIPELIFYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01200310; iTF_01048322; iTF_00718728; iTF_01303566; iTF_01049040; iTF_00719543; iTF_00175839; iTF_00060453; iTF_01412453; iTF_00939721; iTF_00938862; iTF_00174418; iTF_01414326; iTF_01411645; iTF_00175168;
- 90% Identity
- -
- 80% Identity
- -