Xcam005953.1
Basic Information
- Insect
- Xiphydria camelus
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_963678675.1
- Location
- OY783193.1:13150187-13153949[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.5e-113 8.9e-109 363.9 31.1 1 300 29 327 29 327 0.97 2 3 0.0042 1.1e+02 2.4 2.8 122 171 327 376 325 380 0.91 3 3 0.037 9.4e+02 -0.7 4.5 134 231 360 394 339 402 0.44
Sequence Information
- Coding Sequence
- ATGGAGTCTTCGGTAGCGGGACGAAGAAGAACCGCTGTTAGGCATTCCGCCGAGGATCAGGCTCTTGATCAAATTGCCAAGGAGGCAGAAGCGCGATTGGCTGCTCGAAGACAAGCAAGGGTAGAGGCCAGGGAGATCCGAATGAAAGAACTGGAGAGACAACAAAAGGAAGCGGAGGAGAATGCCGACAGGGTGTACGATATGTGCGCGGCGGACGCAAACAGAAGCATGAGAGTAACGCCAGACCCGGTGAGGACCTCTCGCCTCCTCACAAATTCTAATAACTTTCAATCGAGTAGGAGGTCCTCGGAAGATTCGTTAGAGGATGCGGGATTTAATCGAGATCTCAGGTTAGAACTAAAGGAGTGCGAGGACAAGTTCAGAAAGGCGATGATCGCTAACGCTCAACTGGACAATGAAAAGTCTTCTTACTCTTATCAGGTAGAATTATTGAAAGACAGATTGGAGGAATTGGAGGAGACCGCCGCTCAGTTGCGTCGCGAACTCAGGGAAAAGAATCGTGAAGCTGAACAACTGAGGCGCGTTAGCCAACGCTTGCAGGAAGATTTCGATATGTGCAGAGCCCAATTATTGGAGCGGGACACGCTTATACAAGAGAATGGACTGGTGATAATTGAGGACGAGGGTAGCGAAACCGAAGGATCCGAAGCGGAGAACGGACCACGTCCCGGGAGAAGAGTACTAGTCGGCACGGAGGCGGCGGAATTATTACAAAATGCTGGAGAAGGATCGTTAGATGTTCGGCTTAAGAAGTTTGCCGCGGAGAAGAGGGAGCTGCAAGATGAAGTTCGACATTTGAGATTGGAGCTGGACGAGGCGAGGAATCGTGCGAGGTCTGAGAGGTCGCCGGGCTCGATATTAGGTGGCTTGACGGATTCCGAAGACATTCAAAGGGAAGCCAACAAGCATCTGGCGGATTATAAATTTAAACTACAAAAGGCGGAGCAAGATATGTCCACCTTGCAAGCTACGGTAGCAAGGCTAGAAAGTCAAGTAATTCGTTATAAATCTGCTGCGGAAGCATCCGAGAAGGCGGAAGACGAACTGAAGGTCGAAAAAAGAAAGTTGCAGAGAGAAGTTCGCGAATCGCAAGGCCGCGTCGAAGAGCTCGAAACGGCCAATTCTCATTTACAGAGACGAATGGATAAGCTTAAAAATGCTAAATCCGCGCTTCTGAAAGAGCTTTGA
- Protein Sequence
- MESSVAGRRRTAVRHSAEDQALDQIAKEAEARLAARRQARVEAREIRMKELERQQKEAEENADRVYDMCAADANRSMRVTPDPVRTSRLLTNSNNFQSSRRSSEDSLEDAGFNRDLRLELKECEDKFRKAMIANAQLDNEKSSYSYQVELLKDRLEELEETAAQLRRELREKNREAEQLRRVSQRLQEDFDMCRAQLLERDTLIQENGLVIIEDEGSETEGSEAENGPRPGRRVLVGTEAAELLQNAGEGSLDVRLKKFAAEKRELQDEVRHLRLELDEARNRARSERSPGSILGGLTDSEDIQREANKHLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQGRVEELETANSHLQRRMDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- -
- 80% Identity
- -