Xcam007405.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xiphydria camelus
Gene Symbol
tfip11
Assembly
GCA_963678675.1
Location
OY783193.1:38433091-38435604[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2e-97 1.7e-93 313.7 15.2 1 275 400 667 400 667 0.99
2 2 0.011 94 3.0 0.0 244 273 681 710 672 712 0.87

Sequence Information

Coding Sequence
ATGTCGGAAGATGAGGTCGAAAGCTTCGAGATTACCGACTATGATTTGGACAATGAATTCAATACAAACAGACCCCGCCGCAAGCTGTCTAAAAAACAGCAAATGCTCGGTATCTGGGCCGACGATAGCGACGAAGAAAGCGTCCCCGCAAGACCATCTTTCAAAACGTTCAACAAAGGCCCTAAAAATTACACAGCTCCGGTTAATTTTGTGGCCGGCGGCGTTCAGCAGGCGGGCAAACCTAAACCGGACAaaaaggaagaggaggaagaagaggaggatgAAGACGATGATACCGGGAGGCCGCAGAGAGGAGACGCGGATTACGTTCCCAATAGTTCAAGCGATTCCGAGGGAGAAGCTCCCAGCAACGTCAGGGCTAAACCTTCGTTCTCCTTGAATTTGGGGGGCGACATAGCGGGTCTGCGTAAAAAGAGAACACCGATTAATCCCGCGTTACTGAAGACTGGCTTGGGCACTTGGGAGGTACACACGAAAGGAATAGGAGCCAAGCTCTTGCTTCAGATGGGATACGAGCCTGGCAAAGGCTTGGGCAAAAAGCTGCAAGGCATAAGCGCCCCTGTAGAAGCGCGTTTGAGGAAGGGCAGAGGCGCTATAGGAGCTTACGGTCCCGAGAAAGTAGCGAAGGTTCCGGAAAAGAAAAAAGACGAAGAAGCGGAGGAAGCCAaggagttcaaagttaaattgtCGCAGTGGCGGAAGGGCGACAACGCTGGGAACAAGAAGAAAGTCAGATATTACTACAGGAGTATAGATCAAGTTCTGGAAGATGGAAAGCTGAAGCCCAATAGAAGGGTTCCCGCGAGTAACGAAATGAGTAGCGTAAAGGTGATAGATATGACCGGACCCAAGCAACGCGTGTTGAGCGGGTACCACGCGATCGCGAGCGGTCATCAGCATCCCGACGAAACTGTCGTAACGACGGATAAAAAGTCCCAAGCCAATTTCTCCCTCCCCGAGCTGCAGCACAATCTGAATTTACTGGTAGATATGTGCGAGCAGGACATCATACAAAATGACAGGAGAACGCGGTACTTGGGCGACAGAGTCGTCGCGCTGGAATCCGAGAAAATGAGCTTATCTAAAATCGTGGATCAGCACGGGCAGCTCATCGACACTTTGGAGAACGTTCTGACCATCATAGAGCGACTTATAGATACGACGAACGAGCTGTCGTTGGAGGAAACTGCCGACGCTTTCAAGAATCTACAGGACAAGTATTACGAGGAGTACAAAATGTACGAATTGGGAGAGCTGGCCAGTACTTTGGTCAGCGCGAAAATGAAGGATCACTTGGCCAACTGGAACGCACTGGCAAATCCGAAGCACCCCATGGAATTGTTCAAGCAGTGGAAAGGTATTTTAGAAGGAGGAAGGAGTACTCTTCAAGTACGAAATCTTCAGCCTTACGATCAGCTGGTTTGGAACGCCTGGATGCCGTCTATAAGAGGAGCGGTGCAACAGTGGACCTGCAGACAATCGGATCCTTTGATCGAGTTAATCGAGCTCTGGCTACCCTTGCTACCGGGATGGATACTGGAAAACATACTGGACCTGTTGATACTCCCGAAACTCACCTTGGAAGTCGAAGAGTGGAATCCGCTCACGGACACGGTCCCTATTCACACGTGGATTCATCCGTGGCTGCCACTCATGCGGAATCGTTTGGACACTCTGATTTATCCGATAATACGGCGCAAACTCGGCTCCGCTTTGGGAGGATGGCACCCGTCGGACAGGTCTGCGAGGTTGATGCTTCAACCCTGGGCGCAGGTGTTCAACAAAGGCGACATGGAGGCCTTCTTAGTGAAGAACATCATACCGAAGCTTCAAATAGCGCTCACGGAGTTCATCATAAACCCTCATCAGCAACACCTGGATCAATGGAACTGGGTCTACGAGTGGAAGGACCTGCTCCCCTCTCACACGATGGCCGGGCTGCTCGACAAGTTCTTCTTCCCGAAGTGGCTCCAAGTTTTAACGCTCTGGCTCAACCACTCGCCCAATTACGATCAAGTCACGAATTGGTACACGGGCTGGAAGGGAGTGCTCAGCGACAAACTACTGGCGGAGCCGCTGATCAAGGAGCACTTCAAGAAGGCGCTGGACATAATGAACAGGGCGGTGAACGCGCCGCAAGCTCATCACCCGGGAGCCATGGAGCAGGTCTCGTACTTGACGAGTCTGGAGCGGGCGCAATCGACGATGTCTCAAGCTGCGTCCATACCTCAGCCCAGGATGGAGAGGTTCGCGGAGGCGGTGCGGATAGCTTCGCAGATACCGCACGGCTTCAAGGATCTCATACAAAAGAAGTGCGAGGAGAGGGGTATCATCTTCGTGCCGATTCCAAACAGATACAGAGAAGCGAAGCAGGTTTACAAAATAGGCAATGTACAGGCGTACATCAACAGGGACATTGTGTACGTCTGCCACAACGGCTCAAACTGGGTACCGACACACCTCAACGCGTTACTCGACATGGCCGAGATTTAA
Protein Sequence
MSEDEVESFEITDYDLDNEFNTNRPRRKLSKKQQMLGIWADDSDEESVPARPSFKTFNKGPKNYTAPVNFVAGGVQQAGKPKPDKKEEEEEEEDEDDDTGRPQRGDADYVPNSSSDSEGEAPSNVRAKPSFSLNLGGDIAGLRKKRTPINPALLKTGLGTWEVHTKGIGAKLLLQMGYEPGKGLGKKLQGISAPVEARLRKGRGAIGAYGPEKVAKVPEKKKDEEAEEAKEFKVKLSQWRKGDNAGNKKKVRYYYRSIDQVLEDGKLKPNRRVPASNEMSSVKVIDMTGPKQRVLSGYHAIASGHQHPDETVVTTDKKSQANFSLPELQHNLNLLVDMCEQDIIQNDRRTRYLGDRVVALESEKMSLSKIVDQHGQLIDTLENVLTIIERLIDTTNELSLEETADAFKNLQDKYYEEYKMYELGELASTLVSAKMKDHLANWNALANPKHPMELFKQWKGILEGGRSTLQVRNLQPYDQLVWNAWMPSIRGAVQQWTCRQSDPLIELIELWLPLLPGWILENILDLLILPKLTLEVEEWNPLTDTVPIHTWIHPWLPLMRNRLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWAQVFNKGDMEAFLVKNIIPKLQIALTEFIINPHQQHLDQWNWVYEWKDLLPSHTMAGLLDKFFFPKWLQVLTLWLNHSPNYDQVTNWYTGWKGVLSDKLLAEPLIKEHFKKALDIMNRAVNAPQAHHPGAMEQVSYLTSLERAQSTMSQAASIPQPRMERFAEAVRIASQIPHGFKDLIQKKCEERGIIFVPIPNRYREAKQVYKIGNVQAYINRDIVYVCHNGSNWVPTHLNALLDMAEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-