Basic Information

Insect: Xestobium rufovillosum
Gene Symbol: GIP
Assembly: GCA_963966045.2
Location: OZ014502.1:26738054-26746042[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.36 5.7e+02 2.3 0.3 22 45 971 994 962 1000 0.84

2 13 0.63 1e+03 1.5 0.2 21 43 1002 1024 995 1029 0.89

3 13 0.14 2.3e+02 3.6 0.1 21 44 1030 1053 1025 1057 0.91

4 13 0.014 23 6.7 0.7 21 46 1058 1083 1055 1088 0.90

5 13 0.0035 5.6 8.7 0.3 21 44 1142 1165 1135 1174 0.88

6 13 2.1 3.3e+03 -0.2 0.1 22 48 1171 1197 1168 1199 0.88

7 13 0.04 65 5.3 0.2 21 43 1199 1221 1196 1229 0.91

8 13 0.011 17 7.2 0.1 23 44 1229 1250 1222 1255 0.90

9 13 0.0017 2.7 9.8 0.3 21 52 1255 1286 1252 1287 0.92

10 13 0.4 6.5e+02 2.1 0.2 23 44 1285 1306 1280 1310 0.89

11 13 0.008 13 7.6 0.0 21 45 1311 1335 1307 1342 0.86

12 13 0.22 3.6e+02 3.0 0.0 22 44 1340 1362 1336 1366 0.91

13 13 0.0073 12 7.7 0.2 21 45 1367 1391 1364 1400 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.36	5.7e+02	2.3	0.3	22	45	971	994	962	1000	0.84
2	13	0.63	1e+03	1.5	0.2	21	43	1002	1024	995	1029	0.89
3	13	0.14	2.3e+02	3.6	0.1	21	44	1030	1053	1025	1057	0.91
4	13	0.014	23	6.7	0.7	21	46	1058	1083	1055	1088	0.90
5	13	0.0035	5.6	8.7	0.3	21	44	1142	1165	1135	1174	0.88
6	13	2.1	3.3e+03	-0.2	0.1	22	48	1171	1197	1168	1199	0.88
7	13	0.04	65	5.3	0.2	21	43	1199	1221	1196	1229	0.91
8	13	0.011	17	7.2	0.1	23	44	1229	1250	1222	1255	0.90
9	13	0.0017	2.7	9.8	0.3	21	52	1255	1286	1252	1287	0.92
10	13	0.4	6.5e+02	2.1	0.2	23	44	1285	1306	1280	1310	0.89
11	13	0.008	13	7.6	0.0	21	45	1311	1335	1307	1342	0.86
12	13	0.22	3.6e+02	3.0	0.0	22	44	1340	1362	1336	1366	0.91
13	13	0.0073	12	7.7	0.2	21	45	1367	1391	1364	1400	0.85

Sequence Information

Coding Sequence: ATGGCGGAATCAATGCCCACGCCAAATCCTACATATATTCCATTGTTTGATGGGACAAATTATGGGAATTGGAAGTTTAGAATACAAGTCCTGTTGGAAGAAAATGATTTGGTAGATTTTATGGAATGTGACCTTGCGGAAATAATAATCACAAGGGGGCTCGCGCAGTCACCAGTCGATCCAAGAGAGGAACAAGTTAGattaaaaactattgaaaaattAACTCGTATGGAAAAGAAGGCTAAAGGTTTGATAATCCAAAGGATATCTGATACTCATATTGAATACGTTAAAAACTGTAGTACACCAAAACAAATAATTAGTACGCTAAATTCTGTGTTTGAAAGGAAAAGCATAGCAAGCCAATTATTTCTTAGAAAAAAACTACTTATGATGAAATataatgataaggaagatactATGGAAAAACATTTCATGAATTTTGACAAGACTGTGAGGGAACTAAGAGGAACCGGtgcaaaacttgaaaacaacgaTATCATATGTCACCTTTTATTAACCTTACCAAAGTCTTTTGAATCTATTGTTGCTGTTTTAGAATGTCATGAGCAAGACAAACTATCGCTGGAATTTGTTAAGGCCCGACTACTCGACGAAGAACAGAAACGTCAAAATACCGATCATCTTTCTGTAAGTACAACATCTGAGGCAGCCTTTGgtgcaaaatttaaatataaatgtcatGCATGTGGCAAGTTTGGTCATAAAAGATCTGAATGTAGAACCATGAAGTTTAGCAACTCACAGGGTGCCAGACCTAACCATCCGAAGCCTGTGTTTCAAAGGGAGTATCAAAATCGAAGATGGAATGAAAGAAAGTCGACAGCAAATGTGTGCGAATCGGAAAGTGAAATATGTTTCATGACAGACGTAGCAGGAAATGGAAATAATGCGGGGGATATCAACTGGTACATAGATTCCGGTGCTTCCGATCACATGGTAAATTCGTTGGACTTCTTTTATGAATATGAAGAATTGAAGATCCCAATTGTGATTGCCGTGGCCAAAAATAATGCAAGTATGCAAGCAACTGGAAGAGGTAACATTAAAGTGTGGTCAAATGTATTGGATAAGCTTATAACGATCGAAAATGTTTTGTACATTGAAAAATTGAAGTGCAATTTACTTTCAGTTAAAAGATTGGAAGAATTAGGTTTATCCATTACATTTCAAGACTCTAAAGTGTATGTAATGGAAAATAATGTAACTTATGCTCAAGGTTATCGAAAGGACAAACTTTATAAAGTTGTGTTTAAAACTTTTAAACCAGAAAATCATAGTTATAATGTTACTGTTGACAATAATAATTTGGAATTGTGGCACAGGAGATACGGACATCTAAGTAAAGATTatcttttaaaaattataaagagaGATTTAGTTGAGGGTTTACcaaaaaattgtaaaactgAGATGAACTTTTGTGAAGTATGTGTTAACTCAAAAGCAACTCGATTACCATTTCATAAATTTAAAGGAAAAGGGTCCTCAAGGCCACTTGAATTAATACATACCGATGTGTGTGGACCTTTTAACCCAGTGTCTTGGGATGGCCATAAATATTTCATTACTTTTATTGACGATTTTACCCATTTTGTAACCATTTATTTGTTGAAAAATAAGTTTGAAGCTTTTAATTGTTTTCTAGAATATAGGTCTGCAGCACAAAATCATTTCCAAACAAAAATTGCTAAGTTAAGATTAGACAATGGAGGAGAATATATATCGACAGAGTTTAAACAGTTTTGCAAGTCGAGTGGTATCCGTTTAGACTATACCATGCCTTATTGCCCCGAGCAAAACGGAACTGCGGAACGATATAACAGAACGTTAGTGGAAAAGGCAAGAGCAATGATCATCGATGCTGGATTACCAAAAGAATTGTGGGGTGAAGCGATGCGTACAGCAGCTTACATAATAAATCGAAGTCCATCAGCTTATTTAGAGCAAAAGGGAGATAACAGTACACCAGCTGGTTTATGGTACAATCAGAAACCCAATGtgaacaaattgaaaatatttggaAGCATTGCATATGCTCACAAACCAAATCAAAGTAAACTCGACGCTAAATGTGAAAAACTAATAATGGTTGGCTACTGTACAAATGGTTACAGACTTTGGGATCCAATTGGAAGAAAAATCATTTCGGCCAGGAACGTTATATTCAATGAGAAAGAACAGTACTTCAATGCACCGAAAGTGACGattaaagaagaaaatgttttaCAAGATATTCACTATGATCAAAAGGAAAATGAAACGGAAGATGAAGGAAATTCTGACATTGAAGAGACGGCTAACCAAGAAAGCAATAAACGAATACGAAAGACTCCTGTTTGGCAAGTGGATTACGATATGACAGCTGATATGGTTTTTGCATTGAATGCTGGAGATTATGTAGAAGATTTACCACAAAATGTAGAAGACATAGGAGAAAGATCTGACCGTGAGGAATGGAGGAAAGCATTGAATGAAGAAATGGATGCTCTGATTAAAAATCAGACCTGGATTTTAACTGATTTACCCAAAGGTAAAAAGGCGATAAATTGTAAATGGGTGTTTAAGATTAAAAGAGATCAAGatggaaatattcaaaaatataaggctcGATTGGTAGCAAAGGGTTGCAGTCAAAAGGAAGGGCTAGATTTCAATGAAATATACTCGCCTGTAGCAAAAATCACAACCATTCGAATACTTCTATCTTTagcaaatgaaaatgaatactTAGTTCACCACATGCATTTCAGCAGTGCCTTTTTAAATGGCATTTTAAAAGAAGATGTCTACATGAAACAACCGGAAGGTTATGTAAGGGACAAATCTAAGGTAGAGATTCCTTGCAATGATGATGAAGTaagagaaactgaaaatgacCGGTCGGGTAGAAAGCCACATGAATGCAAGATATGTAAAAAGTCATTTCGTCTGCCGCAATATTTGGAACGTCACATGAAGAACCATAAAACGTGTCGCACGAATGACAAGCCTTATGAATGCGATGTTTGTAAAAAGCTGTTTAGTTGCACCAAATATCTAAGGCGTCATAAGGTGTGCCACTCCGACGAGAAGCCCTTCAGGTGCGAAATTTGTGAACATGAGTTCCGTGACTACGAGAGTCTAAAACGTCACGTGATTTGCCACACGGACGAGAAGCCGCACAAGTGCCAAATTTGCAAAAAGGCATTTCGTCGTCGTCATCCACTAAAGAGGCATATGTTGCTTCACACCGATGAGAAGCTCCACAAATGCAAAGTTTGTAAAAAAGAGTTCCATTACTTAGATTATCTAAAGAGTCATGCGCAGTGTCACTCCAACGAGAAGCACTTTAGGTGTCAAATTTGCAGAAAAGGCTTTCTTAACTTTGCGCGTCTAAAAAAGCATATGATATGTCACACGGACGAGACGCCTCACAAATGTCGAATTTGTGGAAAAGCGTATCGTCGGTCTAAAAATCTGAAGGACCATGTAATGTGCCACGTAGTTGACAGACCCCACAAatgcaaaatttgtgaaaaagaCTATCGCTACGACCAAGGTCTAAAGAATCACATGATTATTTGTCATTCTGAGGAGCAGCCCCGTAAGTGCGAAATTTGTGGAAAAGAGTTCCGGAGTCTTCAACATCTCAAACGCCACAAGATTAGCCACACGGACTTGAAGCCTTACAAATGCCAAATTTGTAAAAATGCATTTCGGAATTCTAGAACTCTGAAGGAGCACGTGTTGAGCCACACAGACGAGAAGccccaaaaatgcaaaatttgtaaaaaaagatTTCGTATTCCTCAAAATCTGAGAAGTCACATGAAGTCTCACACCGGGGCAAAGCCTTACAAGTGCGAAATTTGTAAAAGAGAATTTGTTAATTCTCAAAATCGAAAGCGTCACATGGCTTACCACAGCGACGAGAAGCCCTACAAATGCGACATTTGTAAGAAAGAGTTCCGTGAACTCCGGTCTCTGAAACGTCACGCGGTGGTCCACATGGAGGAGAAGCCcttcaaatgtgaaatttgcaaaaaagGGTTTTGCACCTTCTCCAATCTGAAGCGTCACATGGTTTATCACAGTGACGAGGAGCCCCCCAAATGTGACATTTGCAAAAAAGAGTTCCGCCACCCCCGGTCCCTGAAACGTCACGCGGTGGTCCACATGGAGGAGAAGCCCTTCACATGTGAAATTGCACCTCCCCACATCTGA
Protein Sequence: MAESMPTPNPTYIPLFDGTNYGNWKFRIQVLLEENDLVDFMECDLAEIIITRGLAQSPVDPREEQVRLKTIEKLTRMEKKAKGLIIQRISDTHIEYVKNCSTPKQIISTLNSVFERKSIASQLFLRKKLLMMKYNDKEDTMEKHFMNFDKTVRELRGTGAKLENNDIICHLLLTLPKSFESIVAVLECHEQDKLSLEFVKARLLDEEQKRQNTDHLSVSTTSEAAFGAKFKYKCHACGKFGHKRSECRTMKFSNSQGARPNHPKPVFQREYQNRRWNERKSTANVCESESEICFMTDVAGNGNNAGDINWYIDSGASDHMVNSLDFFYEYEELKIPIVIAVAKNNASMQATGRGNIKVWSNVLDKLITIENVLYIEKLKCNLLSVKRLEELGLSITFQDSKVYVMENNVTYAQGYRKDKLYKVVFKTFKPENHSYNVTVDNNNLELWHRRYGHLSKDYLLKIIKRDLVEGLPKNCKTEMNFCEVCVNSKATRLPFHKFKGKGSSRPLELIHTDVCGPFNPVSWDGHKYFITFIDDFTHFVTIYLLKNKFEAFNCFLEYRSAAQNHFQTKIAKLRLDNGGEYISTEFKQFCKSSGIRLDYTMPYCPEQNGTAERYNRTLVEKARAMIIDAGLPKELWGEAMRTAAYIINRSPSAYLEQKGDNSTPAGLWYNQKPNVNKLKIFGSIAYAHKPNQSKLDAKCEKLIMVGYCTNGYRLWDPIGRKIISARNVIFNEKEQYFNAPKVTIKEENVLQDIHYDQKENETEDEGNSDIEETANQESNKRIRKTPVWQVDYDMTADMVFALNAGDYVEDLPQNVEDIGERSDREEWRKALNEEMDALIKNQTWILTDLPKGKKAINCKWVFKIKRDQDGNIQKYKARLVAKGCSQKEGLDFNEIYSPVAKITTIRILLSLANENEYLVHHMHFSSAFLNGILKEDVYMKQPEGYVRDKSKVEIPCNDDEVRETENDRSGRKPHECKICKKSFRLPQYLERHMKNHKTCRTNDKPYECDVCKKLFSCTKYLRRHKVCHSDEKPFRCEICEHEFRDYESLKRHVICHTDEKPHKCQICKKAFRRRHPLKRHMLLHTDEKLHKCKVCKKEFHYLDYLKSHAQCHSNEKHFRCQICRKGFLNFARLKKHMICHTDETPHKCRICGKAYRRSKNLKDHVMCHVVDRPHKCKICEKDYRYDQGLKNHMIICHSEEQPRKCEICGKEFRSLQHLKRHKISHTDLKPYKCQICKNAFRNSRTLKEHVLSHTDEKPQKCKICKKRFRIPQNLRSHMKSHTGAKPYKCEICKREFVNSQNRKRHMAYHSDEKPYKCDICKKEFRELRSLKRHAVVHMEEKPFKCEICKKGFCTFSNLKRHMVYHSDEEPPKCDICKKEFRHPRSLKRHAVVHMEEKPFTCEIAPPHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01536975;
90% Identity: iTF_01536975;
80% Identity: iTF_01536975;