Basic Information

Insect: Xestobium rufovillosum
Gene Symbol: -
Assembly: GCA_963966045.2
Location: OZ014503.1:24271028-24272413[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.2e-05 0.0017 20.2 4.3 1 21 10 30 10 32 0.95

2 15 5.4e-06 0.00043 22.1 4.1 1 21 38 58 38 60 0.95

3 15 5.7e-07 4.6e-05 25.2 2.0 1 23 66 88 66 88 0.98

4 15 2.1e-06 0.00017 23.4 2.8 1 21 94 114 94 116 0.95

5 15 4.6e-08 3.7e-06 28.6 0.4 1 23 122 144 122 144 0.98

6 15 0.00022 0.018 17.0 0.7 1 23 150 172 150 172 0.98

7 15 0.00063 0.051 15.6 0.8 1 23 178 200 178 200 0.99

8 15 2.1e-05 0.0017 20.3 4.4 1 23 211 233 211 233 0.97

9 15 0.00026 0.021 16.8 1.4 1 21 239 259 239 261 0.93

10 15 3.8e-08 3.1e-06 28.9 0.5 1 23 267 289 267 289 0.99

11 15 3.5e-06 0.00028 22.7 3.2 1 23 295 317 295 317 0.99

12 15 2.5e-05 0.002 20.0 2.6 1 21 323 343 323 345 0.95

13 15 1.4e-05 0.0012 20.8 3.3 1 23 351 373 351 373 0.97

14 15 3.6e-05 0.0029 19.5 1.6 1 23 379 401 379 401 0.98

15 15 0.068 5.4 9.2 5.1 1 23 407 430 407 430 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.2e-05	0.0017	20.2	4.3	1	21	10	30	10	32	0.95
2	15	5.4e-06	0.00043	22.1	4.1	1	21	38	58	38	60	0.95
3	15	5.7e-07	4.6e-05	25.2	2.0	1	23	66	88	66	88	0.98
4	15	2.1e-06	0.00017	23.4	2.8	1	21	94	114	94	116	0.95
5	15	4.6e-08	3.7e-06	28.6	0.4	1	23	122	144	122	144	0.98
6	15	0.00022	0.018	17.0	0.7	1	23	150	172	150	172	0.98
7	15	0.00063	0.051	15.6	0.8	1	23	178	200	178	200	0.99
8	15	2.1e-05	0.0017	20.3	4.4	1	23	211	233	211	233	0.97
9	15	0.00026	0.021	16.8	1.4	1	21	239	259	239	261	0.93
10	15	3.8e-08	3.1e-06	28.9	0.5	1	23	267	289	267	289	0.99
11	15	3.5e-06	0.00028	22.7	3.2	1	23	295	317	295	317	0.99
12	15	2.5e-05	0.002	20.0	2.6	1	21	323	343	323	345	0.95
13	15	1.4e-05	0.0012	20.8	3.3	1	23	351	373	351	373	0.97
14	15	3.6e-05	0.0029	19.5	1.6	1	23	379	401	379	401	0.98
15	15	0.068	5.4	9.2	5.1	1	23	407	430	407	430	0.93

Sequence Information

Coding Sequence: ATGGCATGCCACACGGATAAGAGGCCTTATGCTTGTGAAATATGTAAGAAAGCATTTCGTCAGAAGACTCATCTAAATGCTCATATGAAGTGCCATACCGATGAGAGACCTTACACCTGCGAATTGTGTAACAAGTCCTTCCGTCAACAATCAAACTTAAATAGTCACGTGAGGTGCCACATGAAAGAGAAACCCTACAAATGTGGCATGTGTGATAAAGGATTTCGTCGGCGCAGCTCCCTAAAGAATCATACGATGAGCCACACAGGCGAGAGACCCTATACGTGTGAAATATGTGACAAAACATTCAGTCAACAAAAGTATCTAAATGCTCATATGTTGTGCCACACAGATGAGAGGCGCTACAAATGTGGCatatgtgataaagcatttcgtCAGCCCAGTTCTCTAAAGAATCATATGGTGAGCCACACAGATGAGAGGCCCTACATGTGCAAAATATGCAACAAAGGCTTTCGGAAGAAAGGGATTCTAACTGGTCATATGATGAGCCACACAAACGAGAAAAcctacaaatgtgaaatgtgtATGAAAGCATTCCAACTGCCACAAACGTTAAACAAACATATGATGAGCCACATCAACAATAGTCACATAAAAGAAagaccccacaaatgtgaaatatgtaaaaaggcATTCCGACACCCCAGCGTTCTAAAAAATCATATGTTTAGCCACTCGGATGAGAGACCCCACATTTGTGCTATATGTAACAAAGCTTTTCGTCAGAAAGTGAATCTAATCGGTCACATGTTGTGCCACACAGACGAAAAATCTTATAAATGTGACATATGTGATAAAGCATTCCGCCAGCCACAAACTCTAAAGAATCACATGATGGTTCACACAGACGATAGACCCTACAAATGCAATAAATGTAGAAAAGCGTTCCGTCAGCTGCAAAGTCTAAGGAAACATCTGCTGACCCATATGGACGAAAGGCCCTAcgtatgtaaaatatgtaacaaAGCATTTCGTCAGAAAGGGACTCTAACAGGTCATATGAAGTGCCACTCAAAGGAGAAGCCCTACAAATGTGGCatatgtgataaagcatttcaacgATCAAACACTTTAAAGCATCACATGTTCAACCACACAGGCGAGAGGccatacaaatgtgaaatatgtaaaacggCGTACCGACAATCCCAAAGTCTAAAAGATCACATGACGTATCATACCGGTGAAAAACCTCATCAGTGCCAGTTATGTGCGAAAAAATTTCATGTGAAAGGTGAACTCAAGAGGCATTTCGATAGGCGTCATAATGGTGACAGAAAATCTGCTGTGTTGGAAGAAGCAATTCACGTTGATCAAGGTTTAAAGAAAGAAAATACTTTTGACTTAAAGTTCAATGTATAA
Protein Sequence: MACHTDKRPYACEICKKAFRQKTHLNAHMKCHTDERPYTCELCNKSFRQQSNLNSHVRCHMKEKPYKCGMCDKGFRRRSSLKNHTMSHTGERPYTCEICDKTFSQQKYLNAHMLCHTDERRYKCGICDKAFRQPSSLKNHMVSHTDERPYMCKICNKGFRKKGILTGHMMSHTNEKTYKCEMCMKAFQLPQTLNKHMMSHINNSHIKERPHKCEICKKAFRHPSVLKNHMFSHSDERPHICAICNKAFRQKVNLIGHMLCHTDEKSYKCDICDKAFRQPQTLKNHMMVHTDDRPYKCNKCRKAFRQLQSLRKHLLTHMDERPYVCKICNKAFRQKGTLTGHMKCHSKEKPYKCGICDKAFQRSNTLKHHMFNHTGERPYKCEICKTAYRQSQSLKDHMTYHTGEKPHQCQLCAKKFHVKGELKRHFDRRHNGDRKSAVLEEAIHVDQGLKKENTFDLKFNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01537484;
90% Identity: iTF_01537484;
80% Identity: iTF_01537484;