Xruf046430.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xestobium rufovillosum
Gene Symbol
-
Assembly
GCA_963966045.2
Location
OZ014503.1:24272549-24279586[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 35 0.0001 0.0083 18.1 0.3 1 23 22 44 22 44 0.95
2 35 0.005 0.4 12.8 4.2 1 20 49 68 49 71 0.95
3 35 0.00082 0.066 15.2 6.0 1 21 77 97 77 99 0.96
4 35 5.6e-05 0.0045 18.9 0.5 1 23 105 127 105 127 0.98
5 35 0.024 1.9 10.6 3.5 1 23 133 156 133 156 0.95
6 35 1.3e-05 0.001 20.9 0.3 1 23 211 233 211 233 0.95
7 35 4e-05 0.0032 19.4 2.2 1 23 239 261 239 261 0.98
8 35 0.0014 0.11 14.5 6.5 1 21 267 287 267 289 0.94
9 35 3.1e-05 0.0025 19.7 0.2 1 23 295 317 295 317 0.99
10 35 0.0016 0.13 14.3 4.2 1 20 323 342 323 345 0.95
11 35 0.001 0.084 14.9 3.3 1 21 351 371 351 373 0.93
12 35 0.013 1 11.5 5.5 1 20 379 398 379 401 0.94
13 35 0.00042 0.034 16.1 2.6 1 21 407 427 407 429 0.95
14 35 8.3e-06 0.00067 21.5 1.3 1 23 435 457 435 457 0.96
15 35 0.015 1.2 11.3 6.9 1 21 463 483 463 485 0.95
16 35 0.00098 0.079 15.0 3.1 1 21 491 511 491 513 0.93
17 35 0.0011 0.087 14.8 4.9 1 21 519 539 519 541 0.95
18 35 0.00048 0.039 15.9 3.9 1 23 547 569 547 569 0.97
19 35 6e-06 0.00048 21.9 2.8 1 21 593 613 593 615 0.95
20 35 1.3e-07 1e-05 27.2 0.4 1 23 621 643 621 643 0.98
21 35 0.00014 0.011 17.7 0.7 1 23 649 671 649 671 0.98
22 35 0.00025 0.02 16.9 0.9 1 23 677 699 677 699 0.99
23 35 0.017 1.3 11.1 0.5 5 23 714 732 712 732 0.95
24 35 0.00073 0.059 15.4 1.4 1 21 738 758 738 760 0.93
25 35 1.1e-07 8.8e-06 27.4 0.5 1 23 766 788 766 788 0.99
26 35 9.9e-06 0.0008 21.3 3.2 1 23 794 816 794 816 0.99
27 35 0.002 0.16 14.0 0.2 1 17 822 838 822 839 0.94
28 35 4.1e-05 0.0033 19.3 3.3 1 23 850 872 850 872 0.97
29 35 0.0001 0.0082 18.1 1.6 1 23 878 900 878 900 0.98
30 35 0.16 13 8.0 7.8 1 23 906 928 906 929 0.95
31 35 0.0001 0.0083 18.1 0.3 1 23 972 994 972 994 0.95
32 35 0.005 0.4 12.8 4.2 1 20 999 1018 999 1021 0.95
33 35 0.0012 0.1 14.7 4.9 1 21 1027 1047 1027 1049 0.95
34 35 5.6e-05 0.0045 18.9 0.5 1 23 1055 1077 1055 1077 0.98
35 35 0.024 1.9 10.6 3.5 1 23 1083 1106 1083 1106 0.95

Sequence Information

Coding Sequence
ATGTTTAGTGTTCAGTTGTCTTTGCAGGGGGAGATTTTTCATAACGATGAGACAAATGATGAATTCTCTTGCGAACTGTGCGGAAAAGCATTCCGTCAACGGAGGTATCTTAATGGTCATTTGGCGGGCCACATAGAGAGGCCCTTCTCCTGCGAAATATGTAACAAATCATACCGTCAGGAAATGCATCTAAAAGGTCACATGACGTGCCATACAGGCGAAAAGCCGTACACCTGCCACATATGTTACAAAGGATTCAGCCAGCAAAAGTATCTAAATAGTCACATGATGTGCCACGTAGAAGTGAaaccgttcaaatgtgaaatatgcggAAGAATGTTCGGTTGGTCCTATAGTTTGAAGCGCCACATGGTGACCCACACCaacgaaaagccccacaaatgtgaaatatgcaatACGGCGTACCGGGAGTCCAGAAGTTTAAAGAGTCATTTCAGTAAATATCATAGAAAAGAGCCGGATTCGTCAAGACCTGATTCAGAAACTGTCGTATTGGAAGAAGAGATTAAAGTTGAAGAAGTTAAGACACATATTGTTTCGAATACAAATAACGATGAAATGAAAAATGAATCAAATCTTCAAAGAAAAAATGAGTACAGCACAAGGGAGTTCAAGTGTCCTGATTGTCCGAAAGTCTTCGCCCGCAATTTCTCGTTAAAATACCACGCAATATTACATACAGGAAAGAGACCTTACGAATGTGATCAATGTGAGAAAGCGTTCAAGCATCCCAACACTTTAAAGAATCACAAGATTACTCACACTGACAAGAGACCGCACATATGCTTAGTGTGTAATAAAACGTTCCGTCAGAAACCGCATCTGAATACTCATATGAGGTGCCATACGGATGAGAGACCGTACAAATGTGAACTATGTGATGAAGCATTCCGTCAACCCAACCCTTTAAAGATGCATATGTTGAGCCACACGAATGAGAGGCCCTACATCTGCGAAGTGTGTAAGAAAACGTTCCATCAGCCCAGCTTTTTAAAGAATCACATGATCTGCCACACGGACGAGAGACCCTTCATATGCGAACTGTGTAACAAAACATTCCGCTATAAATCGGAACTAAATTATCATGTGATGTGCCACACGGATGAGAGGCCCCACACTTGCGAAATCTGTAAAAAAACTTTCTATAAACTCAGCTCTCTGACACAGCATAAGATTTGCCACACGGATGAGAGGCCCTACACCTGTGAAGTATGCAACAAAGCATATCGTTATAAATGGAATCTAAGTAATCATATGTTGTGCCACACGGATGTGAAGTTCCACGCCTGCAAAATATGTGACAAAGCATTCGTTCAGCTCAACTATCTAAAGAAGCACATGATAAGCCATACGGATGAGagaccccacaaatgtgaaatatgcaacAAAGCATTCCACTATCAGTTTACTCTAAATAATCATATGATGTGCCATACGGAAGAGGGGCACCACATTtgtgaaatatgtaataatGTGTTTAACCAGTCCAGCTCGTTAAAGAAGCATATAATGTGCCACCCAGATGAGAGACCCTACAGTTGCGAAATATGTGACAAAGCATTCCGTTACAAATGCACTCTAAATGAGCACATGATGTGCCACACGGATGAGAAACCCCACACTTGCAACATTTGTAACAAAGCTTTCTTTCAACTCCGCTCTCTGAAGAAGCATAAGATTAGCCACACAGACAATAAGCCCTACATGTGTGAACTCTCTAAGGAATCATACGATGAGCCACACAGGGAGAGACCCTATACGTGTGAAATATGTGACAAAACATTCAGTCAACAAAAGTATCTAAATGCTCATATGTTGTGCCACACAGACGAGAGGCGCTACAAATGTGGCatatgtgataaagcatttcgtCAGCCCAGTTCTCTAAAGAATCATATGGTGAGCCACTCAGATGAGAGGCCCTACATGTGCAAAATATGCAACAAAGGCTTTCGGAAGAAAGGGATTCTAACTGTCCATATGATGAGCCATACAAACAAGAGAAcctacaaatgtgaaatgtgtATGAAAGCATTCCGACTGCCACAAACGTTAAACAAGCATATGATGAGCCACATCAACAATAGTCACATAAAAGAAAGACCCCACAAATCTGAAATATGTAAAATGGCATTCCGACACCCCAGCGTTCTAAGAAATCATATGTTTAGCCACTCGGATGAGAGACCCCACATTTGTGCTATATGTAACAAAGCTTTTCGTCAGAAAGTGAATCTAATCGGTCACATGTTGTGCCACACACACGAAAAATCTTATAAATGTGACATATGTGATAAAGCATTCCGCCAGCCACAAACTCTAAAGAATCATATGATGGTTCACACAGACGATAGACCCTACAAATGCAATAAATGTAGAAAAGCGTTCCGTCAGCTGCAAAGTCTAAGGAAACATCTGCTGACCCATATGGACGAAAGGCCCTAcgtatgtaaaatatgtaacaaAGCATTTCGTCAGAAAGGGACTCTAACAGGTCTTATGAAGTGCCACTCAAAGGAGAAGCCCTACAAATGTGGCatatgtgataaagcatttcaacgATCAAACACTTTAAAGCATCACATGTTCAACCACACAGGCGAGAGgccctacaaatgtgaaatatgtaaaacggCGTACCGACAATCCCAAAGTCTAAAGGATCACATGACGTATCATACCGGTGAAAAACCTCATCAGTGCCAGTTATGTGCGAAAAAATTTCATGTGAAAGGTGAACTCAAGAGGCATTTCAATAGGCATCATAATGGTGACAGAAAACTTGCTGTATTGGAAGAAGCAATTCACGTTGATCGTGGTTTAAAGAAAGAAAATACTCTTGACTTAAAGTTCAATGCGGAGATTTTTCATAACGATGAGACAAATTATGAATTCTCTTGTGAACTGTGCGGAAAAGCATTCCGTCAACGGAGGTACCTTAATGGTCATTTGGCGGGCCACATAGAGAGGCCCTTCTCCTGCGAAATATGTAACAAATCATACCGTCAGGAAATGCATCTAAAAGGTCACATGACGTGCCATACAGGCGAAAAGCCGTACGCCTGCCACATATGTTACAAAGGATTCAGCCAGCAAAAGTATCTAAATAGTCACATGATGTGCCACGTAGAAGTGAaaccgttcaaatgtgaaatatgcggAAGAATGTTCGGTTGGTCCTATAGTTTGAAGCGCCACATGGTGACCCACACCaacgaaaagccccacaaatgtgaaatatgcaatACCGCGTACCGGGAGTCCAGAAGTTTAAAGAGTCATTTCAGTAAATATCATAGAAAAGAGCCGGATTCGTCAAGACCTGATTCAGAAACTGTCGTATTGGAAGAAGAGATTAAAGTTGAGGAAGTTAAGGTTGAAATTTCGCTGCCGTAA
Protein Sequence
MFSVQLSLQGEIFHNDETNDEFSCELCGKAFRQRRYLNGHLAGHIERPFSCEICNKSYRQEMHLKGHMTCHTGEKPYTCHICYKGFSQQKYLNSHMMCHVEVKPFKCEICGRMFGWSYSLKRHMVTHTNEKPHKCEICNTAYRESRSLKSHFSKYHRKEPDSSRPDSETVVLEEEIKVEEVKTHIVSNTNNDEMKNESNLQRKNEYSTREFKCPDCPKVFARNFSLKYHAILHTGKRPYECDQCEKAFKHPNTLKNHKITHTDKRPHICLVCNKTFRQKPHLNTHMRCHTDERPYKCELCDEAFRQPNPLKMHMLSHTNERPYICEVCKKTFHQPSFLKNHMICHTDERPFICELCNKTFRYKSELNYHVMCHTDERPHTCEICKKTFYKLSSLTQHKICHTDERPYTCEVCNKAYRYKWNLSNHMLCHTDVKFHACKICDKAFVQLNYLKKHMISHTDERPHKCEICNKAFHYQFTLNNHMMCHTEEGHHICEICNNVFNQSSSLKKHIMCHPDERPYSCEICDKAFRYKCTLNEHMMCHTDEKPHTCNICNKAFFQLRSLKKHKISHTDNKPYMCELSKESYDEPHRERPYTCEICDKTFSQQKYLNAHMLCHTDERRYKCGICDKAFRQPSSLKNHMVSHSDERPYMCKICNKGFRKKGILTVHMMSHTNKRTYKCEMCMKAFRLPQTLNKHMMSHINNSHIKERPHKSEICKMAFRHPSVLRNHMFSHSDERPHICAICNKAFRQKVNLIGHMLCHTHEKSYKCDICDKAFRQPQTLKNHMMVHTDDRPYKCNKCRKAFRQLQSLRKHLLTHMDERPYVCKICNKAFRQKGTLTGLMKCHSKEKPYKCGICDKAFQRSNTLKHHMFNHTGERPYKCEICKTAYRQSQSLKDHMTYHTGEKPHQCQLCAKKFHVKGELKRHFNRHHNGDRKLAVLEEAIHVDRGLKKENTLDLKFNAEIFHNDETNYEFSCELCGKAFRQRRYLNGHLAGHIERPFSCEICNKSYRQEMHLKGHMTCHTGEKPYACHICYKGFSQQKYLNSHMMCHVEVKPFKCEICGRMFGWSYSLKRHMVTHTNEKPHKCEICNTAYRESRSLKSHFSKYHRKEPDSSRPDSETVVLEEEIKVEEVKVEISLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01537481;
90% Identity
iTF_01537481;
80% Identity
iTF_01537481;