Xruf026580.1
Basic Information
- Insect
- Xestobium rufovillosum
- Gene Symbol
- -
- Assembly
- GCA_963966045.2
- Location
- OZ014497.1:23208804-23210393[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.35 2e+02 3.6 0.3 21 42 10 28 9 28 0.90 2 14 0.00073 0.43 12.2 0.6 17 41 34 55 30 63 0.88 3 14 0.019 11 7.7 0.4 18 41 63 83 57 85 0.84 4 14 0.0042 2.5 9.8 5.3 14 41 87 111 82 113 0.82 5 14 0.003 1.8 10.2 3.1 7 41 109 139 107 141 0.79 6 14 7.7e-05 0.045 15.3 1.7 16 40 145 166 139 188 0.88 7 14 0.019 11 7.7 2.2 19 40 192 210 188 220 0.88 8 14 3.6 2.1e+03 0.4 1.9 17 39 218 237 210 246 0.82 9 14 0.36 2.1e+02 3.6 6.0 14 40 243 266 231 275 0.81 10 14 2.1 1.2e+03 1.1 5.8 1 29 259 286 259 297 0.82 11 14 0.038 22 6.7 0.9 18 43 357 379 348 380 0.88 12 14 0.0018 1 11.0 2.7 2 38 370 403 369 409 0.82 13 14 0.11 64 5.2 1.6 5 28 402 424 398 434 0.79 14 14 0.064 38 6.0 0.4 2 28 420 446 419 453 0.91
Sequence Information
- Coding Sequence
- ATGGGACGTACCAGTGAAACACCTTTCCATTGCCAAAAGGCATTTTCTGAGCGCAGTACTTTGAAAAGTCATATTAATACTCGCATGGGAGAAAGGCCcaacaaatgtgaaatttgccagaaggCATTCTCTGACCGCTCTAACTTGACACGTCATATTAagactcacacaggagaaaggccccacaaatgtgaaatttgtcagaAAGCATTCTCTGACCGCTCTACCTTGACAAGTCATATTAAGACTCACACGGGAGAAAagtcccacaaatgtgaaatttgccagaaaacatTCTCTCGGCATTCTACTTTAACAAATcatgttaggactcacacaggagaaaagcctcacaaatgtgaaatttgccagaaaacatTCTCTCAGAGTTCTACTTTAATGAACCATGTTACGACTCACACCGTGGAAAGGTCttataaatgtgaaatttgccagaaagcattcaaTGGGACTTCTAATTTAAAGAAACACCTTAAAAttcacacaggagaaaagcgTAAGATTTGTCAGAAAGCATTCTCTGATCGCTCTGCCCTGAGAAGGCCTCATAGCTGTGAGATTTGCCAGAAAGCGTTCGTTGAGCATTCTAATTTAAAGCAACACCTTAAAATTCACACGGGAGAAaaacctcacaaatgtgaaatttgccagagagCATTTTTTGAGACCTCTCATTTGAGGAAACATGTTAtgactcacacaggagaaaagcctcacaagtgtgaaatttgccaaaaagcattcattGAGCATTCTAATTTAAAGAAACACCTTAAAATTCACACGGGAgagaagcctcacaaatgtgaaatttgccagaaagcattctgcAGGCGTTCTGATTTAACAGCACACGTTTGTACTCATACGGGAGAATGGCTTCACAAATGTGAAGTTTGCCAGCAAGTATTCATATTCACCAAGCCATACATGTTAAGCAGACACGTTAAGGCTCATACTGGAGGAAGTAAATTCAAGTGCAACAGTTTTAGATTAAATGACGAACTTACACGTAATATGAGGATACACACAGGTAAAAAGCCCCCCGTTTGCAATATTTGCGAGAAACCGTTCTCACATTTGAGAAATATAAAGGCGCATATTAAAGAGGTGCACGACAAAGAAACCtcacacaaatgtgaaatttgtgaaaagGCATTCTCCAAGCGTGCCACTTTATTAAAGCATGTCAAGACACATACGGGACAAAGctcttacaagtgtgaaatttgtaaTAAGGTGTTCAGCCACGTGTATCTTAACCATGCCAATGAAAGTACATTTTTCTGTAAGTTTTGCAATGCTGATTTTAAGTCTGAATGGTACTTGGAGAAACATAAAGAGAAGCAAGTAAATGGGGAAATCGTCGCAGCAAAAATCGAGGAATCCCAAAATGAGCAGtccaatgaaaatatttatggCGTAAAATTGGACGAGAATATAAcagatgaagaagaaaatgtCGTTGTAAAGTctgaaaagtttataaaaaatgaAGAGTATGAAGTGAAAAATCAGAGCAGTGTTGGTGTAAAAGAAGAAAGTGATACTTTAGACGAAGGGGAATAG
- Protein Sequence
- MGRTSETPFHCQKAFSERSTLKSHINTRMGERPNKCEICQKAFSDRSNLTRHIKTHTGERPHKCEICQKAFSDRSTLTSHIKTHTGEKSHKCEICQKTFSRHSTLTNHVRTHTGEKPHKCEICQKTFSQSSTLMNHVTTHTVERSYKCEICQKAFNGTSNLKKHLKIHTGEKRKICQKAFSDRSALRRPHSCEICQKAFVEHSNLKQHLKIHTGEKPHKCEICQRAFFETSHLRKHVMTHTGEKPHKCEICQKAFIEHSNLKKHLKIHTGEKPHKCEICQKAFCRRSDLTAHVCTHTGEWLHKCEVCQQVFIFTKPYMLSRHVKAHTGGSKFKCNSFRLNDELTRNMRIHTGKKPPVCNICEKPFSHLRNIKAHIKEVHDKETSHKCEICEKAFSKRATLLKHVKTHTGQSSYKCEICNKVFSHVYLNHANESTFFCKFCNADFKSEWYLEKHKEKQVNGEIVAAKIEESQNEQSNENIYGVKLDENITDEEENVVVKSEKFIKNEEYEVKNQSSVGVKEESDTLDEGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01536861;
- 90% Identity
- iTF_01536861;
- 80% Identity
- iTF_01536861;