Xruf012897.1
Basic Information
- Insect
- Xestobium rufovillosum
- Gene Symbol
- Hr39
- Assembly
- GCA_963966045.2
- Location
- OZ014494.1:28252732-28271708[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.18 4.9e+03 -1.9 4.6 46 109 211 278 119 323 0.55 2 4 2.5e-08 0.0007 20.7 0.0 1 24 398 421 398 433 0.88 3 4 0.002 56 4.6 0.0 77 135 451 509 418 531 0.61 4 4 2.7e-73 7.3e-69 234.7 0.7 178 408 503 729 491 729 0.91
Sequence Information
- Coding Sequence
- ATGGAAGAAGACATGAGGTCTCCAAATGTATCTGTTACTCCCATTAACGTGGAACCATACTCTCCTGcagctctttcaaatggagacATTGACAGGCATACCCCTCATGTGCACAACGACTCCCAACAACGCTCTCTATCCTCTTCTCGTCCAGCAGCAACAACAGTCCTTACCAATGGAGATATTCTGGATAGTTCTGATGCTGAAGTTGCTCAGATCGATTTTCAATCTAGCATCAGTCTGAGGACTAAGAAGAAAGCAGATGGGGATAGAAGTGATATGCCGCGACCTATGTCGTGGGAGGGCGAACTATCTGATGGGGAAAGGGACATGTGCATCGATGAGGACAGTGGATCACACCAGGTACCTGAAAACCTGACGATAACATCAAAGCAACCTGCAGGGCCCCATGACGCCAAAGAAAGTCCGATAATGAAGTTGAAACAACCTCCAGTGGGCAGCTATTCCCTCCACAGTACACCAAGTAACTCACCCCTGCTTAGCCAGCGCCATCACGTGATAGGAGTGCCGATCATCAGCCATAAAGATCTTATGAATAGAGCCCTCAACGTTCCTCCAACGCCGAGTCCTGATTCTGCGATACATTCAGCGTATAGTGTTTTTAGTTCACCTAATCAATCTCCGTTGACTCAAAGACATATTACGTTAACCCCTAATTTAAGTCGGAATAATAGTGATGCGTCCCATTCGAGTTGTTGTAGTTATTCTAGTGTTTCGGTTTCAGTTTCTCCAACGCAGCAGTTTTCACCCACCCATAGTCCTATCCAGGGCCGACATATGCCCAATATTCAAAATAGTCCATTGCATCATAACGTACTTTATCGGAGCCTCCAAGAGGACAATAGTATTCATTATACTCCTGAACATGATGGCCTCGATGAGGTCGAAGAAAAGACTGGTTTACTTCATACATCTTTACCTGCACAACCTGGTATATCCAGGCAACAACTTATTAACAGTCCGTGTCCTATATGCGGCGACAAAATATCTGGCTTCCATTATGGTATATTTAGCTGTGAATCGTGCAAGGGCTTCTTTAAACGTACTGTACAAAATAGgaaaaattatgtatgtataagAGGCGCTGTGTGTCCTGTAACAGTGGCTACCAGAAAGAAATGCCCTGCTTGCCGCTTCGACAAGTGCCTTCAAAGAGGCATGAGGCTCGATGCAATAAGAGAGGATAGGACTAGAGGTGGTCGTTCAACGTATCAGTGTTCATATTCATTACCCCCTTCGTTAACCAGCCATCCAGAGTTAAGATCAAGTACAAATGATCTCCAACAAGGTTTAGGTGATTCACAGAGTGGTAGTTTGACTGTTAAATTAGAACCTGGTGATCCAACGTCGTCTCATTCGAAACGTGGTGGTTTGTCAAGTTCCAAGCATGGAGTCCCACCGTTATTGCAAGAAATAATGGATGTGGAGCATCTGTGGCATTACAACGAACTCGAGTTGAACAAATTAAACAACGAGGCCCATTTACGTAAAGAGAGTTCCAGTGCATCAgtacaaaatatttcaaaccaTCCGCTCTTATCAGGGACTGCACTAGCGGGTAGTACAGATACCAATCCagattttctggcaaatttgtGCAGTATAGCTGATCGTAGATTACTCAAAATAGTCAAATGGTGCAAAAGTCTTccactttttaaaaatatttcgATCGATGATCAAATATGCCTTCTAATAAATTCTTGGTGTGAACTTCTGTTGTTTTCGTGTTGTTTTCGATCCATGTCTACTCCAGGGGAAATTCGTGTATCTTTAGGAAAAAGCATAACATTAAGCCAAGCAAAAGATATGGGCATGCAGGCGTGCATAGAAAGAATGCTCAATTTTACTGAACAACTTCGTAGACTTAGGGTAGATCAGTATGAATATGTTGCCATGAAAGTTATTGTGCTTCTCACTTCAGATACTTCTGAATTGAGGGAAGCTGAAAAAGTTAGAGCGTCCCAAGAAAAAGCATTGCAAGCTTTGCAAGACTACACCTTGGCGCATTACCCAGAAAGTCCTGCAAAGTTTGGTGAACTGCTACTACGTATTCCAGAACTCCAAAGAACTTGCAACGTGAGCAAGGAGATGTTGACGAATAAATCGAAGGATGGAGAGGGCCCTAGTTTCAATCTACTTATGGAATTGCTCCGAGGGGACCACTAA
- Protein Sequence
- MEEDMRSPNVSVTPINVEPYSPAALSNGDIDRHTPHVHNDSQQRSLSSSRPAATTVLTNGDILDSSDAEVAQIDFQSSISLRTKKKADGDRSDMPRPMSWEGELSDGERDMCIDEDSGSHQVPENLTITSKQPAGPHDAKESPIMKLKQPPVGSYSLHSTPSNSPLLSQRHHVIGVPIISHKDLMNRALNVPPTPSPDSAIHSAYSVFSSPNQSPLTQRHITLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHMPNIQNSPLHHNVLYRSLQEDNSIHYTPEHDGLDEVEEKTGLLHTSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCIRGAVCPVTVATRKKCPACRFDKCLQRGMRLDAIREDRTRGGRSTYQCSYSLPPSLTSHPELRSSTNDLQQGLGDSQSGSLTVKLEPGDPTSSHSKRGGLSSSKHGVPPLLQEIMDVEHLWHYNELELNKLNNEAHLRKESSSASVQNISNHPLLSGTALAGSTDTNPDFLANLCSIADRRLLKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLSQAKDMGMQACIERMLNFTEQLRRLRVDQYEYVAMKVIVLLTSDTSELREAEKVRASQEKALQALQDYTLAHYPESPAKFGELLLRIPELQRTCNVSKEMLTNKSKDGEGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00753059;
- 90% Identity
- iTF_01536240;
- 80% Identity
- iTF_01536240;