Basic Information

Insect: Xestia xanthographa
Gene Symbol: -
Assembly: GCA_905147715.1
Location: LR990657.1:10068674-10080105[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.42 83 5.9 0.9 2 23 790 812 789 812 0.93

2 10 0.12 24 7.6 0.3 2 23 857 879 856 879 0.94

3 10 0.024 4.7 9.8 1.0 2 23 909 931 908 931 0.93

4 10 0.0043 0.85 12.2 1.2 2 23 968 990 967 990 0.92

5 10 0.0013 0.26 13.8 2.6 3 21 1010 1028 1008 1029 0.92

6 10 0.00026 0.052 16.0 4.5 2 23 1041 1062 1040 1062 0.97

7 10 0.003 0.6 12.6 0.8 3 23 1077 1097 1076 1097 0.99

8 10 1.7e-06 0.00035 22.8 0.7 2 23 1104 1125 1103 1125 0.97

9 10 0.00058 0.12 14.9 0.9 1 23 1131 1153 1131 1153 0.98

10 10 0.0035 0.69 12.5 1.0 1 21 1159 1179 1159 1180 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.42	83	5.9	0.9	2	23	790	812	789	812	0.93
2	10	0.12	24	7.6	0.3	2	23	857	879	856	879	0.94
3	10	0.024	4.7	9.8	1.0	2	23	909	931	908	931	0.93
4	10	0.0043	0.85	12.2	1.2	2	23	968	990	967	990	0.92
5	10	0.0013	0.26	13.8	2.6	3	21	1010	1028	1008	1029	0.92
6	10	0.00026	0.052	16.0	4.5	2	23	1041	1062	1040	1062	0.97
7	10	0.003	0.6	12.6	0.8	3	23	1077	1097	1076	1097	0.99
8	10	1.7e-06	0.00035	22.8	0.7	2	23	1104	1125	1103	1125	0.97
9	10	0.00058	0.12	14.9	0.9	1	23	1131	1153	1131	1153	0.98
10	10	0.0035	0.69	12.5	1.0	1	21	1159	1179	1159	1180	0.95

Sequence Information

Coding Sequence: aTGGAAGGGTTTTGCAGAGGTTGTCTCATAAAATATGACGAACCGATGGAGTTGCTGCAGTATACTGAGAAAAACAGAAGGCTGTTTGTGTATTCCACCGGTTTACAGGTGAAAAGAAATGACACCTTCACATTCCAGCTATGTAAAGACTGTTATTTGAACATGAAGCAAGCCTGCAAGTTTAAGAAGAATTGTCGCACATCAGACAAACGATTCAGAAATTACTTAGCTTTAAAAGATGTAGGGGATCCGTTAGATTTCTGCACATTCCTCAAAAATAGTGAtgatactttaacattccgTCTTCCAATGGCAAGTGGGAGTAGCACACCAGcaactcaaaaagaaaaagatgatgataatgAATCAACATGCACAAGTATCCGTAACTTCATGACGGACATCCTCCAAGGAGAGGAGATGCCTGATACAGAAGCACGGATCATTAAAGAGGTAATAGAAGAAGAGACTGATGTACTAGATGACTCGCTTGACTCCCATTGGCTGCAGGATGATGTGTCTATTGACACAGACTTCAGATTGGATTTCAGTTTCAGCCCATTCTCGACACCACGAACCGTAAATAATGATCCCTGTTATACCCCTAAACAAAAAGAGGATCAAGTTACCTTCAACACGATAAACACTGAGAAACAAACAAAGATCCTCAAAGACTTCACAAATGCTTTCAAAACTGACGATAATATTGAAGAACTTAGTATTTTTGTTGGAGCCATAGAGAAAACTGAAAGCTTTAACAATCTAAAAGAATTAAGTCCATTTGTTGAAGACGAAATTGATGGTATGGGGAAACCAGAAACTGATAGTCTTAAAAATAAACCAAATCTAAAAGAATTTATGAGTAATCTTGATATAGATGAAATTGATGGCATGGATACATCGGATAGTAAGACTGACAATAGTAATGAAAAACTGATAGATTTATGTGATTTTGGTATAGAAGAAATCGATAAAAAGGAAAGCAATAATCTTGGGAGTAGAGAAAAGGTAAAAGAATTTTGCAATTTTAGCCTGGACGAAATTGATAGTATTGTAAATGCAAAGAATAATGctctcaaaaataataaaagtctgAAAGAATTAATAAGTAATATGGATATAGAAGAAAATGAAGGATCTGGAACTGCACCAGATAACAGAAGTCTAAAAGAATTAATAAGTAACATGGATATAGAAGAAATTGATGTAGTTGGAGGTACACCAGTTAACAATAATAAGATTCTAAAAGAATTAATAAGTAATATGGACACTGAAAAAAATTATGCTTATGGAAAATCAGAACTCCAAAGTGATAAGAATCTTAAAGAATTCTCTGATTTTAGTTTAGATAGTTTTAGTGGTGTAGAGAAGGCAGAAagtaaaacacacaaaactgtTCAAAGCCTTAAAGTACTCTGCGATTTTAGTTTAGATAGTATAGGTGATATTGAGAAACCAGCAAGCATTACAAACAAAGATGATCAAAGTCTAAAAGAATTATTAGACTTGAGTTTAAACAGTTTTGATGATTCAGCAAAATCTGGAAGTAATACTTTCAAAAATGCTCAAACTGAAAAAGAACTTGATTTGAGTTTAAATGATTTCGATGACATAGCAAACTCAGGAATGAATACTTTCAAAACAGGTAGAAACATACAGGAAATATGTAATTTTGGAGTTGATGAAATGAATGGAAATGAGATATCAGAAAGTAATTTAGATTTACCATCACCGTCTGATGCTTTTGAGAGAGACAAGATGGAGACACTAGACTTTGATTTACCAAAGGGTGTAAGGTCCATAGAGTCTCAAAACGATATAAGTAATAGCAGTATCAACATAGAAGCCTTGTTAAAAGACAAACCATGCATAATCGATAAAAAATTAGAAGATGCTTTAAAGAATACTGATAGTCAAGAATTTTCTTTGGATGATTTACTTGTTTCACCATCAGtgTACCAAGCCACGTCAGCAGCTTCCACACCTACAATAACAAACATATTATTTGGTGAAAAACTTGATACACCTGATACCAATACTAGAATAAAACAGTGTATAGATCAATATCACGATGTAGAAATATTTGAAGAATTCTTCCAAAACGATACAAAAGAATTTGACTTAGAAGACATTAAAAAAGTAAATGGAGGATTTACATCAGAAGAATGGAAAAAACCCATGGCTGTTAATGATACTGAATTTGATAATGAAGAAAATAAGTCAAATAATATTGATATGGATGTATCTATTGTCATTAAAGACCAaactgatgatgattatgatacaGCTTTGACCAAATCAAAGAACGAAATTGTAGAATACATTTCAGATACAACTCCTAATGACAAATTTGACATAGAAAATTCATACTGTAAATTGTGTGAGATTAAGTACAGCACTATGAAGGCATTAAGCATACATTTTTCgaaatatcataaaattaaaatcgtaAAACCAAGAAACAGGAAGGGCACTAATTATGATACCAATGGCACAGAACCTGAGAGCGAAGAGATGGTAGATATTTCGGGAATGCCTCCAAATGACAACTTtgatatcaaaaaaatatactgTAACTTGTGTAAAATAAAGTACGACAATCTCACAGAATTAAGCATACATGTTTCGAAAACTCATCTTGTTAAAACAGTTAAACTGAAAAACAAAGCATTATTGGAGACTTCGGATACATCTTTTAATGATAAATTTGATATAGAAACTTTATACTGTAAATTGTGTGATAAAAAGTACGGCTCTAGCAGGGCATTAAGCGTTCATTTCTCGAAAACTCATAATATCAAAATcgtaaaactaaaatttaacAAAACCCAGAACTACGATAAAATCAAAATAGATGTAACAGAATATACATCTAATGACaagtttgatataaaaaaatcatactgtaaattgtgtaaaaaaaagttcaaaGATGCCAGAGCATTAAGCATACATTTTTCCATAACTCATAACATTAAAATTGTAAAACCGGGTTACGATAGAAAAAAGAACCAAAAAAAGCATTTATGTAATTATTGTGGAAAGAAATGCGAGGATTCTTCAAATTTTGCTAAGCACGTGAAATTATGTAAGttAAAAGAAATTAAGGAAACTTGTAACAAATGCGAGCATTGTCTGCAAGAATTCACGACGCAATTTAATCTAAAAAAACATATGACCAGTCATACGAAGTTACAGAGAAAGGAAGCTACCGGAAAGGAAATCCTATGTACAATTTGCGGCGCCAAGTTACACGGTCAAAGTAACCTAGCATTGCATATGAGGAAACATAATAAAGACTACAGCGTAAAGTGCGAGTACTGcgacaaaggtttctatagacAATCAGATTTGAACTCTCACGTGAGGCAACACACAGGTGAAACACCATTTTCGTGTACATTCTGCACGAGGTTGTTTGCACGTCGAGATGTTTTATTACGACACATTCGTATTCATCTTAaTGAAAGATTATTCGAATGCGACTACTGTGGTTTGAAGTGTATGAAAAAATACGATTTAATTAACCACATACAAAATAAATCCTGTAGGAAGGAATTCAAAAAGAAAGTTAAGAGAAAAAAGAAATCAGTcaagaaagaaaatatggaCATTGATATACCAGAGGGAAAAGAAAATGTAGAAGTTAGAAAAGAAGTAGAAGTTAGAAAAGAAGAAGTAGAAGTTAGAGGAGACGAAACAGAAGTTAGAAAAGAAGATGTAGAAGTTAGAAAACAAGAAGTTACAGTAATTTATGCCAAAGGCAGTGATGCTACGCTCAAACACCAGTTACCTTTCTTGGAAACTGAaagaagtaattaa
Protein Sequence: MEGFCRGCLIKYDEPMELLQYTEKNRRLFVYSTGLQVKRNDTFTFQLCKDCYLNMKQACKFKKNCRTSDKRFRNYLALKDVGDPLDFCTFLKNSDDTLTFRLPMASGSSTPATQKEKDDDNESTCTSIRNFMTDILQGEEMPDTEARIIKEVIEEETDVLDDSLDSHWLQDDVSIDTDFRLDFSFSPFSTPRTVNNDPCYTPKQKEDQVTFNTINTEKQTKILKDFTNAFKTDDNIEELSIFVGAIEKTESFNNLKELSPFVEDEIDGMGKPETDSLKNKPNLKEFMSNLDIDEIDGMDTSDSKTDNSNEKLIDLCDFGIEEIDKKESNNLGSREKVKEFCNFSLDEIDSIVNAKNNALKNNKSLKELISNMDIEENEGSGTAPDNRSLKELISNMDIEEIDVVGGTPVNNNKILKELISNMDTEKNYAYGKSELQSDKNLKEFSDFSLDSFSGVEKAESKTHKTVQSLKVLCDFSLDSIGDIEKPASITNKDDQSLKELLDLSLNSFDDSAKSGSNTFKNAQTEKELDLSLNDFDDIANSGMNTFKTGRNIQEICNFGVDEMNGNEISESNLDLPSPSDAFERDKMETLDFDLPKGVRSIESQNDISNSSINIEALLKDKPCIIDKKLEDALKNTDSQEFSLDDLLVSPSVYQATSAASTPTITNILFGEKLDTPDTNTRIKQCIDQYHDVEIFEEFFQNDTKEFDLEDIKKVNGGFTSEEWKKPMAVNDTEFDNEENKSNNIDMDVSIVIKDQTDDDYDTALTKSKNEIVEYISDTTPNDKFDIENSYCKLCEIKYSTMKALSIHFSKYHKIKIVKPRNRKGTNYDTNGTEPESEEMVDISGMPPNDNFDIKKIYCNLCKIKYDNLTELSIHVSKTHLVKTVKLKNKALLETSDTSFNDKFDIETLYCKLCDKKYGSSRALSVHFSKTHNIKIVKLKFNKTQNYDKIKIDVTEYTSNDKFDIKKSYCKLCKKKFKDARALSIHFSITHNIKIVKPGYDRKKNQKKHLCNYCGKKCEDSSNFAKHVKLCKLKEIKETCNKCEHCLQEFTTQFNLKKHMTSHTKLQRKEATGKEILCTICGAKLHGQSNLALHMRKHNKDYSVKCEYCDKGFYRQSDLNSHVRQHTGETPFSCTFCTRLFARRDVLLRHIRIHLNERLFECDYCGLKCMKKYDLINHIQNKSCRKEFKKKVKRKKKSVKKENMDIDIPEGKENVEVRKEVEVRKEEVEVRGDETEVRKEDVEVRKQEVTVIYAKGSDATLKHQLPFLETERSN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00685773;
90% Identity: iTF_01534252;
80% Identity: -