Egla015006.1
Basic Information
- Insect
- Eugnorisma glareosa
- Gene Symbol
- -
- Assembly
- GCA_947578425.1
- Location
- OX387972.1:7300466-7310077[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 1 87 4.5 1.5 2 23 792 814 791 814 0.93 2 10 0.19 16 6.8 0.3 2 23 859 881 858 881 0.93 3 10 0.14 12 7.2 0.7 2 23 911 933 910 933 0.93 4 10 0.038 3.3 9.0 1.5 2 23 967 989 966 989 0.92 5 10 0.0073 0.63 11.2 2.2 3 21 1009 1027 1007 1028 0.92 6 10 9.2e-06 0.00079 20.4 2.0 2 23 1040 1061 1039 1061 0.97 7 10 6.2e-05 0.0054 17.7 0.5 2 23 1075 1096 1074 1096 0.97 8 10 5.1e-07 4.4e-05 24.3 0.6 2 23 1103 1124 1102 1124 0.97 9 10 3.9e-05 0.0034 18.4 0.4 1 23 1130 1152 1130 1152 0.98 10 10 0.00054 0.047 14.8 1.0 1 21 1158 1178 1158 1179 0.95
Sequence Information
- Coding Sequence
- ATGGAAGGGTTTTGCAGAGGTTGTCTCATAAAATATGATGAACCGATGGAGTTGCTGCAATATACCGAGAAAAACAGAAGGCTGTTTGTATATTCCACGGGTTTACAGGTGAAAAGAAATGACACTTTCACATTCCAGCTCTGTAAAGACTGTTTCTTGAACATGAAGCAAGCCTGCAAGTTTAAGAAGAATTGTCGTACATCAGACAAACGATTCAGAAATTACTTAGCTTTAAAAGATGTAGGGGATCCAGTAGATTTCTGCACATTCCTCAAAAACAGTGATGATACTTTAACATTCCGTTTTCCAATGATAAGTGGGAGTAGCACACCAGCAACTCAAAAAAGTAGAGATGATGATAATGAATCAACATGCACAAGTATCCGTAACTTCATGACGGATATCCTCCAAGGCGAAGAGATGCCTGATACAGAAGCACGGATCATTAAAGAGGTTATAGAAGAAGAGGCTGATTTACTAGATGATTCGCTTGACTCTCATTGGCTGCAGGATGATATGTCTATTGATACGGACTTCAGATTGGATTTTAGTTTCAGCCCATTCTCGACACCACGAACCGTAAATAATGATCACTGTTATACCCCTACACAAAAAGAGGATCAAGTAACCTTCAACACAATAAACACTGAGAAACAAACAAAAATCCTCAAAGACTTCACAAATGCTTTCAAAACTGACGATAATATTCAAGAACTCAGTATTTTTGTTGGAGCCGTAGAGAAAACAGAAGGCTTTAACAATTTAAAAGAATTAATTCCATTTGGTATAGACGAAATTGATGGTATGGAAAAACCAGAAACTGATAGTCTTAAAAATAAACCAAATCTAAAAGAATTGATGAGTAACCTTGATATGGATGAAATTGATGGCATCGACACACCAGATAGTAAGACTGACAATAGTAATGAAAACCTGAAAGAGTTATGTGATTTTGGTATAGAAGAAATCGATAGTAATCATAAAAAGGAAAGCAATAATCTTGAGAGTAGTCAAAATGTAAAAGAAGTGTGCAATTTTGGCCTGGACGAAATTGATAGTATTGTAAATGCAAAGAGTAATGCTCTTAAAAATAATAAAAGTCTGAAAGAATTAATAAGTAATATGGACATAGACGATATTGAAGGAGCTGGAACTACACCAGTTAACAGTAATAACAGTCTAAAAGAATTAATAAGTAACATGGATATAGAAGAAATTGAAGGAGTTGAAAGTACATCAGCTATCAGTAATAATAGTCTAAAAGAATTAATAAGTAATATGGACACTGATAAAATTGATGCTTTTGGAAAATCAGACCTCCAAAGTGATAAAAATCTTAAAGAGTTTTGTGATTTTAGTTTAGATGGTTTTAGTGCTGTAGAGAAAGCTGAAAGCAAAACACAGAAAACTGTTCAAAGCCTTAAAGAACTATGCGATTTTAGTTTAGATAGTATTGGAAGTATTGAGAAACCAGCAAGCATTACAAACAAAAATAATCAAAGTTTAAAAGAATTATTAGATTTGAGTTTTAACAGTTTTGATGGTTCAGAAAAATCTGAAAGTAATACTTTTAAAAATGATCAAACCAAGAAAGAACTTGATTTGAGTTTAAATGATTTCGAGGACATTGCAAACTCAGGAAGTAATACTTTCAAAAAGGATAGAAACATACAGGAAATTTGCGATTTTGGAGTTGATGAAATTAATGGAAATGAGAAATCAGAAAGTAATTTAGATTTACCATCACTGTCGGATGTTTTTGAGAGAGACAAGATGGATACACCAGACTTTGATTTACCTAAGGGTCTAAGGTCCGTACAGTCTCAAAACGATATTAGTAATAGCAGTATCAACATAGAAGCCTTGTTAAAAGACAAACCATGCACAATCGACAAAAATTTAGAAGATGCTTTGAAAAATACTGATAGTCAAGAATTTTCTTTGGAAGATTTACTTGTTTCACCAACAGTGTACCAAGCCACATCAGCAGCTTCCACACCTACAATAACAAACATATTATTTGGTGAAAACATTGATACACCTGATACCAATACTAGAATAGAACAATGCATAGATCAATATCATGATGTAGAAATATTTGAAGAATTCTTCCAAAATGATACAAAAGAATTTTACTTAAAAGACATTAAAAGAGAAAATGGGGGATCTACATCAGAAGAATGGAAAAAACCTATTGCTGTTAATGATGCTGAAGTTGATAATGAAGAAAATAAGTCAAAAGATATTGATATGGATGTATCTATTGACATCAAAGACGAAACTGATGATACAGCTTTAACCGAATCAAAGAACGAAATTGTAGAATACATTTCAGATACAACTCCTAATGACAAATTTGACATAAAAAATTCATACTGTAAATTGTGTGAGAATAAGTACAGCACGACGAAGGCATTAAGCATACATTTCTCGAAATATCATAAAATTAAAATCGTAAAACCAAAACACCGGAACGGCAATAATTATGATACAATTGGGTCAGAACCTGAGAACGAAGAGATAGTAGATATTTCGGGCATGCCTCCAAATGATAACTTTGATATCAAAAATGTATACTGTAATTTGTGTAAAATAAAGTACGACACTCTCACAGAATTAAGCATACATGTCTCAAACACCCATCTTGTCAAAACCGTTAAACTGAAAAGCCAAGCATTATTAGACACTTTGGATACATCTTTTAATGACAAATTTGATATAGAAAATTCATATTGTAAACTGTGTGATATAAAGTACGGCACTAACAGGGCATTAAGCGTACATTTCTCGAAAACTCATAATATCAAAATCATAAAACCAAAATTTAACAAAAATCAGAACTACAATAAAATAGATATAGCTGTAACAGATAATGACAAATTTGATATAGAAAAATCATACTGTAAATTGTGTAAAAAAAAGTTCAAAAATGGCAGAGCATTGAGCATACATTTTTCCATAACTCATAATATTAAAATCGTAAAACCGGAATACGATAGAAAAAAGAACCAGAAAAAACATTTGTGTAATAATTGTGGTAAGAAATGCGAGGATTCTACAAATTTTGCTAAGCATGTGAAAATATGTAAGTTAAAAGGAATGAAGGAAACTTGCAACAAATGTGATTATTGTCAGCAAGAATTCACGACGCAATTTAATCTAGAAAAACATATGACCAGTCATACGAAGATGAAGCGAAAGAAAGCTACCGGAAAGGAAATAGTATGTACAATTTGTGGCGCCATGTTACACAGGCAAAGTAACCTAGCCTTGCATATGAGGAAACATAATAAAGACTACAGCATAAAATGCGAGTACTGCGACAAAGGTTTCTATAGACAATCAGATTTGAACGTTCACGTGAGGAGACACACTGGTGAAACACCATTTTCGTGTACATATTGCCCGAGGTTGTTCGCCCGTCGAGATGTTTTATTGCGACACATTCGAATTCATCTTAATGAAAGATTATTCGAATGCGACTACTGTGGTTTGAAATGTATAAAAAAATACGATTTAATTAAACACATACAAAATAAATCCTGTAGGAAGGAATTAAAAAAGAAAGTTAAAAGAAAAAAGAAATCAGTCAAGAAAGAAAATATGGACATTGTTAAACCTGAGGGAAAAGAAAATGTAGAAGTTACAAAAGAAGCAGAAGTTAGAAAAGAACAAGTTATAGTAATTTATGCCAAAGGCAGTGATGCTACGCTCAAACAACAGTTACCTTTCTTGGAAACTGAAAGAAGTAATTGA
- Protein Sequence
- MEGFCRGCLIKYDEPMELLQYTEKNRRLFVYSTGLQVKRNDTFTFQLCKDCFLNMKQACKFKKNCRTSDKRFRNYLALKDVGDPVDFCTFLKNSDDTLTFRFPMISGSSTPATQKSRDDDNESTCTSIRNFMTDILQGEEMPDTEARIIKEVIEEEADLLDDSLDSHWLQDDMSIDTDFRLDFSFSPFSTPRTVNNDHCYTPTQKEDQVTFNTINTEKQTKILKDFTNAFKTDDNIQELSIFVGAVEKTEGFNNLKELIPFGIDEIDGMEKPETDSLKNKPNLKELMSNLDMDEIDGIDTPDSKTDNSNENLKELCDFGIEEIDSNHKKESNNLESSQNVKEVCNFGLDEIDSIVNAKSNALKNNKSLKELISNMDIDDIEGAGTTPVNSNNSLKELISNMDIEEIEGVESTSAISNNSLKELISNMDTDKIDAFGKSDLQSDKNLKEFCDFSLDGFSAVEKAESKTQKTVQSLKELCDFSLDSIGSIEKPASITNKNNQSLKELLDLSFNSFDGSEKSESNTFKNDQTKKELDLSLNDFEDIANSGSNTFKKDRNIQEICDFGVDEINGNEKSESNLDLPSLSDVFERDKMDTPDFDLPKGLRSVQSQNDISNSSINIEALLKDKPCTIDKNLEDALKNTDSQEFSLEDLLVSPTVYQATSAASTPTITNILFGENIDTPDTNTRIEQCIDQYHDVEIFEEFFQNDTKEFYLKDIKRENGGSTSEEWKKPIAVNDAEVDNEENKSKDIDMDVSIDIKDETDDTALTESKNEIVEYISDTTPNDKFDIKNSYCKLCENKYSTTKALSIHFSKYHKIKIVKPKHRNGNNYDTIGSEPENEEIVDISGMPPNDNFDIKNVYCNLCKIKYDTLTELSIHVSNTHLVKTVKLKSQALLDTLDTSFNDKFDIENSYCKLCDIKYGTNRALSVHFSKTHNIKIIKPKFNKNQNYNKIDIAVTDNDKFDIEKSYCKLCKKKFKNGRALSIHFSITHNIKIVKPEYDRKKNQKKHLCNNCGKKCEDSTNFAKHVKICKLKGMKETCNKCDYCQQEFTTQFNLEKHMTSHTKMKRKKATGKEIVCTICGAMLHRQSNLALHMRKHNKDYSIKCEYCDKGFYRQSDLNVHVRRHTGETPFSCTYCPRLFARRDVLLRHIRIHLNERLFECDYCGLKCIKKYDLIKHIQNKSCRKELKKKVKRKKKSVKKENMDIVKPEGKENVEVTKEAEVRKEQVIVIYAKGSDATLKQQLPFLETERSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00302483; iTF_01532508; iTF_01535303; iTF_01065035; iTF_01533376; iTF_01534252;
- 90% Identity
- -
- 80% Identity
- -