Basic Information

Insect: Xestia xanthographa
Gene Symbol: -
Assembly: GCA_905147715.1
Location: LR990649.1:7106259-7119893[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.8 7.5e+02 2.9 0.1 3 23 114 134 112 134 0.94

2 18 0.024 4.7 9.8 0.3 2 23 138 160 137 160 0.95

3 18 2 3.9e+02 3.8 2.4 2 23 211 233 210 233 0.89

4 18 0.0012 0.23 13.9 1.2 2 23 393 415 392 415 0.95

5 18 0.023 4.6 9.9 0.2 1 21 423 443 423 444 0.94

6 18 0.0021 0.42 13.1 0.6 2 23 454 475 453 475 0.94

7 18 0.0035 0.69 12.5 1.5 1 23 523 546 523 546 0.95

8 18 1.5 3e+02 4.2 0.5 3 15 625 637 624 646 0.79

9 18 7 1.4e+03 2.1 1.7 1 23 651 674 651 674 0.90

10 18 7.6e-05 0.015 17.7 1.6 1 23 680 702 680 702 0.95

11 18 0.00026 0.051 16.0 1.8 1 23 709 731 709 731 0.98

12 18 0.0001 0.02 17.3 2.3 1 23 736 758 736 758 0.96

13 18 0.00035 0.07 15.6 2.3 1 23 764 786 764 786 0.98

14 18 5.6e-07 0.00011 24.4 1.9 1 23 792 814 792 814 0.98

15 18 0.00065 0.13 14.7 2.6 2 23 821 842 821 842 0.98

16 18 0.0027 0.54 12.8 0.5 2 23 850 872 849 872 0.97

17 18 0.00026 0.051 16.0 0.8 1 23 877 899 877 899 0.96

18 18 0.013 2.7 10.6 2.1 2 23 906 928 905 928 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.8	7.5e+02	2.9	0.1	3	23	114	134	112	134	0.94
2	18	0.024	4.7	9.8	0.3	2	23	138	160	137	160	0.95
3	18	2	3.9e+02	3.8	2.4	2	23	211	233	210	233	0.89
4	18	0.0012	0.23	13.9	1.2	2	23	393	415	392	415	0.95
5	18	0.023	4.6	9.9	0.2	1	21	423	443	423	444	0.94
6	18	0.0021	0.42	13.1	0.6	2	23	454	475	453	475	0.94
7	18	0.0035	0.69	12.5	1.5	1	23	523	546	523	546	0.95
8	18	1.5	3e+02	4.2	0.5	3	15	625	637	624	646	0.79
9	18	7	1.4e+03	2.1	1.7	1	23	651	674	651	674	0.90
10	18	7.6e-05	0.015	17.7	1.6	1	23	680	702	680	702	0.95
11	18	0.00026	0.051	16.0	1.8	1	23	709	731	709	731	0.98
12	18	0.0001	0.02	17.3	2.3	1	23	736	758	736	758	0.96
13	18	0.00035	0.07	15.6	2.3	1	23	764	786	764	786	0.98
14	18	5.6e-07	0.00011	24.4	1.9	1	23	792	814	792	814	0.98
15	18	0.00065	0.13	14.7	2.6	2	23	821	842	821	842	0.98
16	18	0.0027	0.54	12.8	0.5	2	23	850	872	849	872	0.97
17	18	0.00026	0.051	16.0	0.8	1	23	877	899	877	899	0.96
18	18	0.013	2.7	10.6	2.1	2	23	906	928	905	928	0.96

Sequence Information

Coding Sequence: ATGTCTTCGAATGAGTCTGATGATGAACCGCTATCAGTTATAGCGGCAAACAAGAAATTAGTCCCAGAACAATATGACGAGATCTCGTCAGATTCTTCGGAAACTCCaaataagaagaaaaagaagttACCTCCGCCTAAACGGTACTCAGCCACGATAAAGCTTCAAACTAAGAAAACTTGTCGTCAAATGCCGGTGGTGGAGCGGCCAACAGACGTGTGGCTCTACTTAAAAGATCTAAATCCTTCGGGACCTTACAGCTGCTTACTTTGCCCGGATTGGTTCATAAACAGAGCGAAAATCGTTATGCATTACATTCTAAATCATAAGAAAGATTTCTGTGGTATTTGTAGATACTTTGTACCTGATAGAGAAGCTTGGTCTAAACATGCGAAGTTTCACACTCCCTGGCCGTGCTCTCAATGTGTTGAGACCTTTGAAACTGAAGCAGACATCCGGCATCATCTCAAGTCTGAGCATAATCTTGTGCATTGTCGACTATGTCACTTCCGTGTACTTGATGGTGAACTGTACCATTCACATTTGTTCCAAAAACACTTGGTCTCCAATGTGGCAAATAAAGATGAAGAAAATCTTTGGGAGTTAGAATATGATGGCACCTCAAACTTTCTCTGTTTACTATGTAATAAATCTACCAACTCAACTAGAACATTCTTCAACCATTTTATGGGATATCACCATTTTACCATAAAATGTTTCACAGCTCTATTGTCAGGACGAGATATACCATTCGTAATTTATGGTGCTGATCTCAGAGCGGAATTTGTTGAAGAACAACTGAAGCACCATGCGAGATATGGCTATGTTGACTCATCTGAGCTCAAGGCTCCTGACTCTGCTATAGAGGCTGAATCAAATGAaactagagaattaatcaaagaAATATATCTACCAGAAATTAAACAAGAAGTGGAGACAGCTGATGATGCCAAAAATGATGATGGAACTGAAAAGTCAAAGGATGAGCCAAATGATATTTACAAAAACTACAAtggtattgatgattttgatgttaCTTTAACAGAACTGATAGTAGTACAGAAATGTTACCAAGATTACATTAATGACGTACTGTCAGATATTAATGCTAAATCATTTTTTGAATACTCGGAAGTTGATTATGATAAGCTTTCAACTGAAGTACCAATGGATATAGTTTGCACATTGTGCAAAGTTCGGTATAGCACTTTGTCAAATTTTACTTCTCATATGTTCAAGATGCATTCTGTAAAGTCTTTGCCAATATTTTCCTGTAGAATTTGTGCCACTAGTTTTGAGTCCCAACAGGATCTTGACACTCATATATCAAGGGAGTTAGGGGAATTCGAGGACCTGTGGATATGCCAGTTTTGTGATAAAGAGTTTGACGACAGGGAGAACACGCGGAGACATCTGACGGAACATTGGGAGGATGTAGAATATGACAACTGTTTCAGTCCACATTTAGGTTTTAAATGTCGATTTTGTCCGACTCTGTTTTGGCACGAAACAGACAGGGAGACGCATCAAGTGCGCGCGCATTACTTCAACCATAAAGACGCGTATTACAAGTGTGAGAGCTGCAATGAAACATTTAGTGATGAGGTCTGGTTTGTCCACCACTACATGGAGAAGCACAGCACTCCAGAAAAGACACTGCTATACCTCCTAAAGTGTTCCCTCTGTTGTGTGGTGATGCCAAGTATCGAGGAGATGAGAGCACACTTCAACTGTGACCACGCTGAAGCTAGGAAGGTGTTCTGTTCTTTGGACTCCTGTCAGTACAAGCCTTTGAGCCATAGGAAGTCCTTTAAGCTGCATGTGCGGACGATGCACTCGTCCCGCTCGACACGTGTGGACCGCGCAGTGGACTGTGTAGTGTGTGGCCGCGAGTTCAGCAGCTCGCGGGCGTGTGGCGCGCACACGGCGCAGGCGCACGGCCCTGGCAAGTTCAAGTGCAAGCTGTGCAGGGAGGTACTGCACACTATGGACGAGAGAAAACTCCACTACCTATTACTTCACCCGGGGCAACATCCGTTCGCGTGCACGGACTGTGGCAAGTCGTTCCAGTACAAGTCGTCACTGTACATGCACAAGCAGGACCATCTGCCTAACAAGCAGAATTATACGTGTACGTACTGTGGGAAGACTTTCTTGAAACGTGATTCATTCCGCGAACACGTACAAATCCACGAGGGACCGCGGCACGCGTGTTCGTATTGCCCGATGCGCTTCGTGCAGCGATCCAACATGTTACGTCACGAGCGCAGACACACAGGCGAGCGGCCCTACGCCTGCCCGCACTGCCCTCGGACCTTCGCCGACAAAGGAGCCTGTAACTCGCATACCAGgacCCATCTAAAGAATGCAAAATACGCGTGTATGTACTGCGGCAAGACGTTTGTGCAGAAGTCTAAGCTCACGTATCACATCAGAAAACATACCGGAGAAAACCTGGAGACGTGTACAGTGTGCTCGAAGTTGTTCACAAGCGCCTGCTCGCTGCGTGAACATATGAAGATACACGTACCTAAAAAGGATATAATCAAGTGTCCGCTATGTGAGCGCACGTACCAGGACGAGCGCTACATGCTGCGCCACGTGCGCACGTCGCACTCGCACGCGCAGCACGCCTGCCCCGTGTGCAACAAGATGCTCACCAGCTCCGCCGGCCTGCGACACCACGTCATCACGCACAGTCCTTTGAAGACTATCAGGTGCAAACTATGTCCAAAAGAGTACTCAGTGAAAAGAACAATGCTCAAACATTTCCGACGTCGGCACGGCTTCAAGGGTAATGAAGCAAACATTAAAGACTTTTACACTAGGCTGGACCCTAGAGACTGTAAACTGGGCCTCGACGAGCCCATCATGATCAGTATATTCGGACCTCCAGCAAAGAAACCGATGGACGAAATATTAGTAGCAGATTACGTCACACTTACTAACATAAAACAGCAGAGACCAACGGAAGAAAATCGAGAGAAAGAGACAGAAAATTCACAAGACACACTGGCAGTTAGCTCTCAGTCAGAACATCCCAAAGAGAAAGACAAGGATGGAGATAGAATTGTAATAGAGGAACGGCAAATAGTTATTAAGATTGAACCTCAAGAACCTGGCGTAAACACTGAAGGGGAGCTGGAACCTACCGACTTTGTTAGCGTTAAAATTGAACCAATGGATGACGAGCATGGTGAATGA
Protein Sequence: MSSNESDDEPLSVIAANKKLVPEQYDEISSDSSETPNKKKKKLPPPKRYSATIKLQTKKTCRQMPVVERPTDVWLYLKDLNPSGPYSCLLCPDWFINRAKIVMHYILNHKKDFCGICRYFVPDREAWSKHAKFHTPWPCSQCVETFETEADIRHHLKSEHNLVHCRLCHFRVLDGELYHSHLFQKHLVSNVANKDEENLWELEYDGTSNFLCLLCNKSTNSTRTFFNHFMGYHHFTIKCFTALLSGRDIPFVIYGADLRAEFVEEQLKHHARYGYVDSSELKAPDSAIEAESNETRELIKEIYLPEIKQEVETADDAKNDDGTEKSKDEPNDIYKNYNGIDDFDVTLTELIVVQKCYQDYINDVLSDINAKSFFEYSEVDYDKLSTEVPMDIVCTLCKVRYSTLSNFTSHMFKMHSVKSLPIFSCRICATSFESQQDLDTHISRELGEFEDLWICQFCDKEFDDRENTRRHLTEHWEDVEYDNCFSPHLGFKCRFCPTLFWHETDRETHQVRAHYFNHKDAYYKCESCNETFSDEVWFVHHYMEKHSTPEKTLLYLLKCSLCCVVMPSIEEMRAHFNCDHAEARKVFCSLDSCQYKPLSHRKSFKLHVRTMHSSRSTRVDRAVDCVVCGREFSSSRACGAHTAQAHGPGKFKCKLCREVLHTMDERKLHYLLLHPGQHPFACTDCGKSFQYKSSLYMHKQDHLPNKQNYTCTYCGKTFLKRDSFREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPHCPRTFADKGACNSHTRTHLKNAKYACMYCGKTFVQKSKLTYHIRKHTGENLETCTVCSKLFTSACSLREHMKIHVPKKDIIKCPLCERTYQDERYMLRHVRTSHSHAQHACPVCNKMLTSSAGLRHHVITHSPLKTIRCKLCPKEYSVKRTMLKHFRRRHGFKGNEANIKDFYTRLDPRDCKLGLDEPIMISIFGPPAKKPMDEILVADYVTLTNIKQQRPTEENREKETENSQDTLAVSSQSEHPKEKDKDGDRIVIEERQIVIKIEPQEPGVNTEGELEPTDFVSVKIEPMDDEHGE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00758517;
90% Identity: iTF_01533297; iTF_01532365; iTF_01063070; iTF_00712195; iTF_00685706; iTF_01064906; iTF_00928977; iTF_01062100; iTF_01063991;
80% Identity: -