Basic Information

Insect: Noctua pronuba
Gene Symbol: -
Assembly: GCA_905220335.1
Location: LR999905.1:3953298-3965568[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1.7 1.5e+02 3.8 0.1 3 23 114 134 112 134 0.95

2 19 0.0087 0.81 11.0 0.1 2 23 138 160 137 160 0.95

3 19 1.7 1.5e+02 3.8 2.4 2 23 211 233 210 233 0.89

4 19 0.0013 0.12 13.6 1.0 2 23 392 414 391 414 0.95

5 19 0.022 2 9.7 0.2 1 21 422 442 422 443 0.94

6 19 0.0018 0.17 13.1 0.6 2 23 453 474 452 474 0.94

7 19 8 7.4e+02 1.6 1.5 1 23 490 513 490 513 0.84

8 19 0.012 1.1 10.6 2.7 1 23 522 545 522 545 0.94

9 19 9.1 8.4e+02 1.5 1.3 8 23 595 611 587 611 0.88

10 19 1.3 1.2e+02 4.2 0.5 3 15 624 636 623 645 0.79

11 19 1.9e-05 0.0017 19.4 0.9 1 23 679 701 679 701 0.95

12 19 0.00022 0.02 16.0 1.8 1 23 708 730 708 730 0.98

13 19 8.5e-05 0.0079 17.3 2.3 1 23 735 757 735 757 0.96

14 19 0.0003 0.027 15.6 2.3 1 23 763 785 763 785 0.98

15 19 4.8e-07 4.4e-05 24.4 1.9 1 23 791 813 791 813 0.98

16 19 0.00055 0.051 14.8 2.6 2 23 820 841 820 841 0.98

17 19 0.00034 0.032 15.4 0.6 2 23 849 871 848 871 0.97

18 19 0.0003 0.028 15.6 0.8 1 23 876 898 876 898 0.97

19 19 0.011 1.1 10.6 2.1 2 23 905 927 904 927 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1.7	1.5e+02	3.8	0.1	3	23	114	134	112	134	0.95
2	19	0.0087	0.81	11.0	0.1	2	23	138	160	137	160	0.95
3	19	1.7	1.5e+02	3.8	2.4	2	23	211	233	210	233	0.89
4	19	0.0013	0.12	13.6	1.0	2	23	392	414	391	414	0.95
5	19	0.022	2	9.7	0.2	1	21	422	442	422	443	0.94
6	19	0.0018	0.17	13.1	0.6	2	23	453	474	452	474	0.94
7	19	8	7.4e+02	1.6	1.5	1	23	490	513	490	513	0.84
8	19	0.012	1.1	10.6	2.7	1	23	522	545	522	545	0.94
9	19	9.1	8.4e+02	1.5	1.3	8	23	595	611	587	611	0.88
10	19	1.3	1.2e+02	4.2	0.5	3	15	624	636	623	645	0.79
11	19	1.9e-05	0.0017	19.4	0.9	1	23	679	701	679	701	0.95
12	19	0.00022	0.02	16.0	1.8	1	23	708	730	708	730	0.98
13	19	8.5e-05	0.0079	17.3	2.3	1	23	735	757	735	757	0.96
14	19	0.0003	0.027	15.6	2.3	1	23	763	785	763	785	0.98
15	19	4.8e-07	4.4e-05	24.4	1.9	1	23	791	813	791	813	0.98
16	19	0.00055	0.051	14.8	2.6	2	23	820	841	820	841	0.98
17	19	0.00034	0.032	15.4	0.6	2	23	849	871	848	871	0.97
18	19	0.0003	0.028	15.6	0.8	1	23	876	898	876	898	0.97
19	19	0.011	1.1	10.6	2.1	2	23	905	927	904	927	0.96

Sequence Information

Coding Sequence: ATGTCTTCGGATGAGTCTGATGATGAACCGCTATCAGTTATAGCGGCAAACAAGAAATTAGTCCCAGAACAATATGACGAGGTCTCATCAGATTCCTCGGAGTCTCCAAATAAGAAGAAAAAGAAGTTACCACCACCCAAACGGTTCTCAGCCACGATAAAGCTTCAAAGTAAGAAGACTGGTCGTCAACTGCCGATAGTGGAGCGGCCAACGGACGTGTGGCTCTACCTAAAAGATCTTAATCCTTCGGGACCTTACAGTTGCTTACTTTGCCCAGATTGGTTCATAAACAGAGCGAAAATCGTTATGCATTACGTTCTAAATCATAAGAAAGATTTCTGTGGTATTTGTAGATACTTTGTACCTGACAGAGAAGCTTGGTCTAAACATGTGAAGTTTCACACTCCCTGGCCATGCTCTCAATGTGTTGAGAATTTTGAAACCGAGGCAGATCTCCGGCTTCATCTCAAGTCTCAGCATAATCTTGTGCATTGTCGACTGTGTCACTTCCGTGTACTTGATGGAGAACTGTACCATTCACATTTGTTCCAAAAACACACTGTCTCCAATGTAGCAAATAAAGATGAAGAAAATCTTTGGGAGTTAGAATATGATGGCACCTCAAACTTCCTCTGTTTACTGTGTAATAAATCTACCAACTCAACTAGAACATTCTTCAACCATTTTATGGGGTATCACCATTTTACCATAAAATGTTTCACAGCTCTGTTGTCAGGAAGAGATATACCATTCTTAGTTTATGGTGCTGATCTCAGAGCGGAATTTGTTGAAGAACAACTGAAGCATCATGAGAGATATGGCTATGTTGACTCGGGGCTCAAGCCTGTTGAATCTGCTATAGAGGTTGACTCAAATGAAACTAGAGAATTAATCAAAGAAATATATTTACCAGAAATTAAACAAGAAGTGGAGACAGCTGATGATGCCAAAAATGATGATGGAACTGAAAAGACAAAAGATGATCAAAATGATGTTTACAAAAGCTACAATGGTATTGATGATTTTGATGTTACATTAACGGAACTGATAGTAGTACAGAAATGTTACCAAGATTACATTAGTGACGTACTGTCAGATATTAATTCTAAATCATTTTTTGAATACTCGGAAGTTGATTATGATAAGCTTTCAACTGAAGTACCAATGGATATAGTTTGCACACTGTGCAGTGTTCGGTATAGCACTTTGTCAAATTTCACCACTCATATGTTCAAGATGCATTGTATAAAGTCTTTGCCAATATTTTCCTGTAGAATTTGTGCCACTACCTTTGAGTCCCAACAGGATCTTGACACTCATATATCAAGGGAGTTAGGGGAATTTGAGGATCTATGGATATGCCAGTTTTGTGATAAAGAGTTTGACGACAGGGAGAATACGCGGCGACATCTGACAGAACATTGGGAGGATGTAGAATATGACAACTGTTTCAGTCCACATTTAGGTTTCAAATGTCGGTATTGTCCGACTCTGTTTTGGCACGAAACGGACAGGGAGACGCATCAAGTGCGCGCGCATTACTTCAACCATAAAGATGCGTACTACAAGTGTGAGAGCTGCAATGAAACATTTAGTGATGAGGTCTGGTTTGTCCACCACCACTTAGAGAAGCACGGCACTCCTGAGAAGACACCGCTTTACCTCCTAAAGTGTTCCCTCTGTTGCGTGGTGATGCCAAGTATCGAGGAGATGAGAGCACACTTCAACTGTGACCATGCTGAAGCTAGAAAGGTGTTCTGTTCGTTGGACTCCTGCCAGTACAAGCCTTTGAGCCATAGGAAGTCGTTTAAGCTTCACGTGCGGACGATGCACTCATCTCGCTCGACACGTGCGGACCGCGCAGTGGACTGCGTAGTGTGTGGCCGCGAGTTCAGCAGCTCGCGGGCGTGTGGCGCGCACACGGCGCAGGCGCACGGCCCCGGCAAGTTCAAGTGCAAGCTGTGCAGGGAGATACTGCATACTATGGACGAGAGAAAACTCCACTACCTAATAAGTCACCCGGGGCAGCATCCGTTCGCGTGCCCGGACTGCGGCAAGTCGTTCCAGTACAAGTCGTCACTGTACATGCACAAACAGGACCATCTGCCGAACAAGCAGAACTATACGTGTACGTACTGTGGGAAGACTTTCTTGAAACGTGATTCATTCCGTGAACACGTCCAAATCCACGAGGGACCACGGCACGCGTGTTCTTACTGCCCGATGCGCTTCGTGCAGCGATCCAACATGTTACGTCACGAGCGCAGACATACTGGCGAGAGGCCTTACGCCTGCCCGCACTGCCCCCGCACCTTCGCCGACAAAGGAGCCTGTAACTCGCACACCAGGACCCATCTAAAGAATGCATCTTACGCGTGTATGTACTGCGGCAAGACGTTTGTGCAGAAGTCCAAGCTCACGTATCACATCAGGAAACATACGGGAGAAAACCTGGAAACGTGCACCGTGTGTTCGAAGTTGTTCACGAGCGCGTGCTCGCTGCGTGAACATATGAAGATACACGGACCTAAAAAGGATCAAATCAAGTGTCCGCTATGTGACCGCACGTACCAAGACGAGCGCTACATGCTACGCCACCTGCGTACGTCACACACACACGCGAAGCACCCCTGTCCCATCTGCAACAAGATGCTGACCAGCACCGCAGGGCTCCGCCACCACGTCATCACTCACAGTACTTTGAAGACTATCAGGTGCAAACTATGCCCAAAAGAGTACTCAGTGAAAAGAACAATGCTGAAACATTTCCGACGTCGGCATGGCTTCAAGGGTACGGAAGCGAACATCAAAGACTTTTACACTAGGCTAGACCCTAGAGAGTGTAACCTCGGCCTCGACGAGCCTATCATGATCAGCATATTCGGACCTCCAGCAAAGAAACCGATGGACGAACTATTAGTAGCAGATTACGTCACACTTACTAACATAGAAAAGCCAACAAAAGAAAATGGAGAGAAAGAGACAGAAAATAAACAAAACACACTGTCAGAGAACTCTCTGTCAGAACATCCCAGAGAGACAGACAAGGATGGAGATAGAATTGTAACAGAGGAAAGGCAAATAGTTATAAAGATTGAAGCTCAAGATCCAGGTGTACACACTGAAGGGGAGCTGGAACCTACTGACTTTGTTAGCGTTAAAATTGAACCAATGGATGATGAGCATGGTGAATAA
Protein Sequence: MSSDESDDEPLSVIAANKKLVPEQYDEVSSDSSESPNKKKKKLPPPKRFSATIKLQSKKTGRQLPIVERPTDVWLYLKDLNPSGPYSCLLCPDWFINRAKIVMHYVLNHKKDFCGICRYFVPDREAWSKHVKFHTPWPCSQCVENFETEADLRLHLKSQHNLVHCRLCHFRVLDGELYHSHLFQKHTVSNVANKDEENLWELEYDGTSNFLCLLCNKSTNSTRTFFNHFMGYHHFTIKCFTALLSGRDIPFLVYGADLRAEFVEEQLKHHERYGYVDSGLKPVESAIEVDSNETRELIKEIYLPEIKQEVETADDAKNDDGTEKTKDDQNDVYKSYNGIDDFDVTLTELIVVQKCYQDYISDVLSDINSKSFFEYSEVDYDKLSTEVPMDIVCTLCSVRYSTLSNFTTHMFKMHCIKSLPIFSCRICATTFESQQDLDTHISRELGEFEDLWICQFCDKEFDDRENTRRHLTEHWEDVEYDNCFSPHLGFKCRYCPTLFWHETDRETHQVRAHYFNHKDAYYKCESCNETFSDEVWFVHHHLEKHGTPEKTPLYLLKCSLCCVVMPSIEEMRAHFNCDHAEARKVFCSLDSCQYKPLSHRKSFKLHVRTMHSSRSTRADRAVDCVVCGREFSSSRACGAHTAQAHGPGKFKCKLCREILHTMDERKLHYLISHPGQHPFACPDCGKSFQYKSSLYMHKQDHLPNKQNYTCTYCGKTFLKRDSFREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPHCPRTFADKGACNSHTRTHLKNASYACMYCGKTFVQKSKLTYHIRKHTGENLETCTVCSKLFTSACSLREHMKIHGPKKDQIKCPLCDRTYQDERYMLRHLRTSHTHAKHPCPICNKMLTSTAGLRHHVITHSTLKTIRCKLCPKEYSVKRTMLKHFRRRHGFKGTEANIKDFYTRLDPRECNLGLDEPIMISIFGPPAKKPMDELLVADYVTLTNIEKPTKENGEKETENKQNTLSENSLSEHPRETDKDGDRIVTEERQIVIKIEAQDPGVHTEGELEPTDFVSVKIEPMDDEHGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00758517;
90% Identity: iTF_01535175;
80% Identity: -