Xxan014859.1
Basic Information
- Insect
- Xestia xanthographa
- Gene Symbol
- -
- Assembly
- GCA_905147715.1
- Location
- LR990645.1:27107774-27139251[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 4.4e-05 1.1 10.8 0.0 3 40 201 238 199 240 0.92 2 31 0.018 4.6e+02 2.2 0.0 18 40 242 264 236 266 0.88 3 31 0.0056 1.4e+02 3.9 0.0 18 40 268 290 265 294 0.89 4 31 0.0072 1.8e+02 3.6 0.0 19 40 295 316 289 318 0.90 5 31 0.0064 1.6e+02 3.7 0.0 18 39 320 341 314 344 0.89 6 31 0.0064 1.6e+02 3.7 0.0 18 40 346 368 343 370 0.90 7 31 0.0061 1.5e+02 3.8 0.0 18 40 372 394 369 396 0.89 8 31 0.0067 1.7e+02 3.7 0.0 18 39 398 419 393 422 0.89 9 31 0.27 6.7e+03 -1.6 0.0 18 40 424 446 420 448 0.89 10 31 0.0041 1e+02 4.4 0.1 17 40 449 472 434 475 0.88 11 31 0.0078 1.9e+02 3.5 0.0 19 40 477 498 473 500 0.90 12 31 0.0072 1.8e+02 3.6 0.0 18 39 502 523 498 526 0.90 13 31 0.0057 1.4e+02 3.9 0.0 18 40 528 550 523 553 0.90 14 31 0.0068 1.7e+02 3.6 0.0 19 40 555 576 550 580 0.90 15 31 0.0061 1.5e+02 3.8 0.0 18 40 580 602 577 604 0.89 16 31 0.0052 1.3e+02 4.0 0.0 18 40 606 628 600 630 0.88 17 31 0.0072 1.8e+02 3.6 0.0 18 39 632 653 628 656 0.90 18 31 0.0062 1.6e+02 3.8 0.0 18 40 658 680 655 683 0.90 19 31 0.0052 1.3e+02 4.0 0.0 18 40 684 706 679 709 0.89 20 31 0.0078 1.9e+02 3.5 0.0 19 40 711 732 707 734 0.90 21 31 0.0068 1.7e+02 3.7 0.0 18 39 736 757 731 760 0.89 22 31 0.0061 1.5e+02 3.8 0.0 18 40 762 784 757 786 0.90 23 31 0.0059 1.5e+02 3.8 0.0 18 40 788 810 785 813 0.89 24 31 0.0061 1.5e+02 3.8 0.0 18 40 814 836 811 838 0.89 25 31 0.0057 1.4e+02 3.9 0.0 18 40 840 862 836 865 0.89 26 31 0.0057 1.4e+02 3.9 0.0 18 40 866 888 862 891 0.89 27 31 0.0061 1.5e+02 3.8 0.0 18 40 892 914 889 916 0.89 28 31 0.0061 1.5e+02 3.8 0.0 18 40 918 940 915 942 0.89 29 31 0.0056 1.4e+02 3.9 0.0 18 40 944 966 941 970 0.89 30 31 1.2e-07 0.0029 19.3 0.1 19 50 971 1002 966 1033 0.80 31 31 5.9e-05 1.5 10.4 0.0 105 190 1107 1180 1087 1189 0.79
Sequence Information
- Coding Sequence
- ATGTTGAGGTGTAAAATACGGTTCAGGTTAGGAGAACTCCAAGTAGAACGCGAAGCAACATCAGAAACACAGAAGGAGCTGCGCGAGAGATTGCTCACTGCGGCCAGAATACGAGAGAGTCGAGCATCGCGGTGCGGGGAGTTAGATGCGGCCTATAGGAGGGCGCAGGCCATACGAGGATACCTTACGGACCTGATCGAGTGCCTTGATGAGAAGATGCCACAACTGGAGGCGTTAGAAGCTCGGGCGTTAAACTTACACAAGCGTCGCTGTGAGTTCCTTATTGAGAGGCGAAGAGCTGACCTGAGGGATCAGGCGCAAGATGTGCTCGCACCGCCTGGTCGGGTCACAAAATCAACGGACAACGAAGAGAAGACGCGTCGTGCGGCGGAGCGCGAGGGGCGGCGCCGGGCCAGACGGCTCAAGCGCGAGGCCACGGCCGCTGCCGCCGGCACCGCGCTGCCGCACCGCGACGGAGACTCCTCCGACGATGAGCTGCCTCCGCATGAGATGCATCACTACACACAGGAGAGAGACGCTATCCGTCAGCAGTCAGCCTCGTTGTTCAGCGACGCGCTCCCCGCGTGGCGCAGCGTGTCCGGCGTGTGCAAGCGTCTCGCGCGCTGGAGAGCTCGCGCCGCAGACCTGTACACCGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTGCCGACCTGTACACGGACGCGTATGTAGCCGACTGCCTGTCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTGCCGACCTGTACACGGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTGCCCACCTGTACACCGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTGCCGACCTGTACACGGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAGGTGCCGACCTGTACACCGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTGCCGACCTGTACACGGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTGCCGACCTGTACACGGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAGGTGCCGACCTGTACACGGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGTCTTACGTCCGACATGAGGTAAGTGCCGACCTGTACACGGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTGCCCACCTGTACACCGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTGCCGACCTGTACACGGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAGGTGCCGACCTGTACACCGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTGCCGCCCTGTACACGGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTGCCGACCTGTACACGGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTGCCGACCTGTACACGGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTGCCGACCTGTACACGGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAGGTGCCGACCTGTACACCGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTGCCGACCTGTACACGGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTGCCCACCTGTACACCGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTGCCGACCTGTACACGGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAGGTGCCGACCTGTACACCGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTGCCGACCTGTACACCGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTGCCGACCTGTACACCGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTGCCGACCTGTACACGGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTGCCGACCTGTACACCGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTGCCGACCTGTACACGGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTGCCGACCTGTACACCGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTGCCGACCTGTACACGGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTAGCGCCTTACGTCCGACATGAGGTAAGTGCCCACCTGTACACCGACGCGTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGCTAATATTGTGGAACCCGCTGGCAGATGAAGACAACGAAGATTACGAGAGAATGGATTGGTACAAATGCTTGATGATGTACGGCGTCCGTACAGACCGCGGTGCAGACTCGTCCTCGTCAGGGTCGGAAGGCGAGGCGGAGCCGCTGCAGGTCACGGACAGCTCCGTCCGAGAGGACCCCGACCTGCTGCTGGTGCCTAGCATCATCAGCAGGGTGGTGCTGCCTTGTCTCACAGCTCCGTGCGAGAGGACCCCGACCTGCTGCTGGTGCCTAGCATCATCAGCAGGGTGGTGCTGCCTTGTCTCACAGGTATGCTCGCAGACTCAGGTCACGGACAGCTCCGTGCGAGAGGACCCCGACCTGCTGCTGGTGCCTAGCATCATCAGCAGGGTGGTGCTGCCTTGTCTCACAGAGCTGGTGAGTGTGGCGTGGGACCCGATGTCGGTCCGCTCGTGCACGCGCCTGCGCGGGCTGCTGCTGCGCGCGGCCGGGCTGCCCGCCTGCGCCGGCGCGGTGCGGCGCCTGGCGGCCGGCCTGCGCGCGCGCCTGGCGCAGGCGCTGGGCGCCGATGTGTTCCTGCCTGCGCTGCCGCCTCAGGTAATGGAAGGTCCGGGCGGTGCGTTCTGGCGTCGTTGCCTGGGCGCGGGAGTACGGCTACTGCGCGCCACGCTGTCGCTAACAGGCCCGCCTGCGCTCTTGTATGCCGACCCACTTGTACTGTCGCTTATAGAAACGCTGTGTACGGGCGCGGGCGCTGCGGGCGGGCCCTACGTGGCGCACGCGGGCGCCGCGCTGTGCGCCACGCTGCCGCGCGCCGGCGAGCTGCGCAAGCGAGCACTCGCGCGACTGGCCGCGCTCGCCGCGCTCGCGCTCTCACGGCTTGACACTGATAACCCTTTGCATTTGTAA
- Protein Sequence
- MLRCKIRFRLGELQVEREATSETQKELRERLLTAARIRESRASRCGELDAAYRRAQAIRGYLTDLIECLDEKMPQLEALEARALNLHKRRCEFLIERRRADLRDQAQDVLAPPGRVTKSTDNEEKTRRAAEREGRRRARRLKREATAAAAGTALPHRDGDSSDDELPPHEMHHYTQERDAIRQQSASLFSDALPAWRSVSGVCKRLARWRARAADLYTDAYVADCLPKLLAPYVRHEVSADLYTDAYVADCLSKLLAPYVRHEVSADLYTDAYVADCLPKLLAPYVRHEVSAHLYTDAYVADCLPKLLAPYVRHEVSADLYTDAYVADCLPKLLAPYVRHEVGADLYTDAYVADCLPKLLAPYVRHEVSADLYTDAYVADCLPKLLAPYVRHEVSADLYTDAYVADCLPKLLAPYVRHEVGADLYTDAYVADCLPKLLASYVRHEVSADLYTDAYVADCLPKLLAPYVRHEVSAHLYTDAYVADCLPKLLAPYVRHEVSADLYTDAYVADCLPKLLAPYVRHEVGADLYTDAYVADCLPKLLAPYVRHEVSAALYTDAYVADCLPKLLAPYVRHEVSADLYTDAYVADCLPKLLAPYVRHEVSADLYTDAYVADCLPKLLAPYVRHEVSADLYTDAYVADCLPKLLAPYVRHEVGADLYTDAYVADCLPKLLAPYVRHEVSADLYTDAYVADCLPKLLAPYVRHEVSAHLYTDAYVADCLPKLLAPYVRHEVSADLYTDAYVADCLPKLLAPYVRHEVGADLYTDAYVADCLPKLLAPYVRHEVSADLYTDAYVADCLPKLLAPYVRHEVSADLYTDAYVADCLPKLLAPYVRHEVSADLYTDAYVADCLPKLLAPYVRHEVSADLYTDAYVADCLPKLLAPYVRHEVSADLYTDAYVADCLPKLLAPYVRHEVSADLYTDAYVADCLPKLLAPYVRHEVSADLYTDAYVADCLPKLLAPYVRHEVSAHLYTDAYVADCLPKLLAPYVRHELILWNPLADEDNEDYERMDWYKCLMMYGVRTDRGADSSSSGSEGEAEPLQVTDSSVREDPDLLLVPSIISRVVLPCLTAPCERTPTCCWCLASSAGWCCLVSQVCSQTQVTDSSVREDPDLLLVPSIISRVVLPCLTELVSVAWDPMSVRSCTRLRGLLLRAAGLPACAGAVRRLAAGLRARLAQALGADVFLPALPPQVMEGPGGAFWRRCLGAGVRLLRATLSLTGPPALLYADPLVLSLIETLCTGAGAAGGPYVAHAGAALCATLPRAGELRKRALARLAALAALALSRLDTDNPLHL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -