Basic Information

Insect: Xestia sexstrigata
Gene Symbol: -
Assembly: GCA_941918865.2
Location: CALNXB020000003.1:2385217-2392219[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 9.6 7.9e+02 1.4 0.1 2 8 326 333 325 346 0.64

2 7 2.3e-06 0.00019 22.2 0.3 1 23 350 372 350 372 0.97

3 7 0.00034 0.028 15.4 0.3 1 23 378 400 378 400 0.95

4 7 0.00014 0.011 16.7 3.0 1 23 406 428 406 428 0.98

5 7 0.00021 0.018 16.0 4.1 1 23 434 456 434 456 0.99

6 7 4.6e-05 0.0038 18.1 7.5 1 23 495 517 495 517 0.97

7 7 2e-05 0.0016 19.3 0.3 1 23 523 546 523 546 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	9.6	7.9e+02	1.4	0.1	2	8	326	333	325	346	0.64
2	7	2.3e-06	0.00019	22.2	0.3	1	23	350	372	350	372	0.97
3	7	0.00034	0.028	15.4	0.3	1	23	378	400	378	400	0.95
4	7	0.00014	0.011	16.7	3.0	1	23	406	428	406	428	0.98
5	7	0.00021	0.018	16.0	4.1	1	23	434	456	434	456	0.99
6	7	4.6e-05	0.0038	18.1	7.5	1	23	495	517	495	517	0.97
7	7	2e-05	0.0016	19.3	0.3	1	23	523	546	523	546	0.96

Sequence Information

Coding Sequence: ATGTTAGATCCAATTGATACTATCGACATGAAATCGTGTCGTATATGCCTGACAAACAAAAAACCATTATGTCCTTTATTCAGATATAAGTTGTCGGGTAATTATGCTGAAATGCTTACAGCGATTGCCGACGTGAAGGTTTCATGCAATGATGGCTTGCCTGAAAAGATTTGCCTAAAATGCTGCACTACTTTGGAGAAAGCATATCTTCTTAAAACAGTGGCTGAAAGGTCTGATAAGAAACTGAGAAAAATACTAGCAAGGGAAAAAGAAAATGTACCAACTAAAAAGATTGCATTTGATTCTTTTACGGACATAAAAAGTGAGATTGGCCCATTGACAATAAAACCAGAACCAAAATGGGAAATGGAGATAGAGATTCCAGAAAAACCGGTGGAGACAATGGATGGCAAAGATATTGTAATTGCAAACACAGTCATAAGAAAAGTTGACCCTAATGCAGAGGATGTAAAAATTGATATGGGCGAGGAAGATGTGCAGTTAACTTGGAGAACTACAAGGACTAATTATACTCCTAAAAATGATCCAGATGCTGAGGCTGAATATTTAGATGATGATGTTTTCCAAGATGACGATGATGATGACTATATTCCTCCAGTTGAAAAGCCCAAGACGAAATTCAAGAAACCAAAACTGTCAGATATCAAAGTGTTTAAAGGTAAAACAGTAGTAAGGAAAGTGAGAGTGCTGAAGAAGTTTAAAGAAGAATTTGACATGGATTTGGCTAGATCTGAGAATAAATCACGAGCTACTACAATAACTTGCTATCCAATTTTAAAGAATGGTACAAGAGGTCAACCTATCCTATTGAAGAGACCAAAGGATGCAACAGTACTAAAAGTTCATACAGGATATAAACCAAAAACTCAGTCATCTGGTGGAGAGAAAATAGTACGTAGAGAAAAACCTGTGAGAATGGTACGGACTGCCGTCACCAAACAACGAGAGAAGCTGGTGTGCCCTGTATGTGGTATACTTACGTTCACTTTGGGAAATCACATAGCAACGCATCAAGAGAAAAAACGATACACTTGTGCTCAATGCCCTAGATCGTTTGCACAGAAGAGTAATTTGATAGTCCATGCGAAACAACATACAGGAATAAAAGACCACATTTGCGAAATATGTGGAGCCGGTTTTTACAGCCAGAAATCATTGGTTAGACATAATTTAATTCACAAGGGCGAGAGACCATTTTCCTGCAACTTGTGTACGAAGAGATTTATTGCTCGTTGTGATCTGAATCGGCACCTGCGCATACATTCGGGTTACAAACCGTTCAAATGTAACACTTGCACAATGTCGTTCAACGCGAAACATCAGTTGCAAAACCACGAGAGAATGCACACCGGGGAGCGGCCGTACACATGCCAGGTGCGTCATAGTCCTTACACTATTGTTGTCACGTTCCAGATGGCAGGTCTGAGTCGCCATATGGCGATACATACTGGGGAAAAACGGTTCAACTGTACCTTCTGCAGTAAAAGATTTACGCAAAGCCACCATCTACAGAACCATATGGTTACCCACACTGGTGATAGGCCCTATACTTGCGAGGTCTGCAATGTTGCATTCAGTTACAAAGTGAACTTAAATAACCATGTGTCCAAAGTGCATGGTATCAACCTGAAATTCAAATCTATCCATACCGTGACTGAGGATATTCTTCGACGGGAGATGGGTATGATAAACGAGACAAGAGTTGCTCTGTCACATATTATGCCACAATTGGGAGATGTTCCAACGCCGGGTGCGCATGAAACCGTACTCTCACTATCCTGA
Protein Sequence: MLDPIDTIDMKSCRICLTNKKPLCPLFRYKLSGNYAEMLTAIADVKVSCNDGLPEKICLKCCTTLEKAYLLKTVAERSDKKLRKILAREKENVPTKKIAFDSFTDIKSEIGPLTIKPEPKWEMEIEIPEKPVETMDGKDIVIANTVIRKVDPNAEDVKIDMGEEDVQLTWRTTRTNYTPKNDPDAEAEYLDDDVFQDDDDDDYIPPVEKPKTKFKKPKLSDIKVFKGKTVVRKVRVLKKFKEEFDMDLARSENKSRATTITCYPILKNGTRGQPILLKRPKDATVLKVHTGYKPKTQSSGGEKIVRREKPVRMVRTAVTKQREKLVCPVCGILTFTLGNHIATHQEKKRYTCAQCPRSFAQKSNLIVHAKQHTGIKDHICEICGAGFYSQKSLVRHNLIHKGERPFSCNLCTKRFIARCDLNRHLRIHSGYKPFKCNTCTMSFNAKHQLQNHERMHTGERPYTCQVRHSPYTIVVTFQMAGLSRHMAIHTGEKRFNCTFCSKRFTQSHHLQNHMVTHTGDRPYTCEVCNVAFSYKVNLNNHVSKVHGINLKFKSIHTVTEDILRREMGMINETRVALSHIMPQLGDVPTPGAHETVLSLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00707349;
90% Identity: iTF_01440456;
80% Identity: -