Xrho003856.1
Basic Information
- Insect
- Xestia rhomboidea
- Gene Symbol
- Gcfc2
- Assembly
- GCA_963853795.1
- Location
- OY970758.1:4834645-4842780[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-10 2.9e-06 28.1 0.1 3 50 201 248 199 280 0.78 2 2 2.8e-05 0.53 10.9 0.0 126 190 468 532 452 541 0.85
Sequence Information
- Coding Sequence
- ATGTTGAGGTGTAAAATACGGTTCAGGTTAGGAGAACTCCAAGTAGAACGCGAAGCAACATCAGAAACACAGAAGGACCTGCGCGACAGGCTGCTCACTGCGGCCAGAATACGAGAGAGTCGAGCGTCGCGTTGTGGGGAGCTAGATGCTGCCTATAGGAGGGCGCAGGCCATACGAGGGTACCTTACAGACCTTATCGAGTGCCTTGATGAGAAGATGCCACAACTGGAGGCGTTAGAAGCTCGGGCGTTAAACTTACACAAGCGTCGCTGTGAGTTCCTTATTGAGAGGCGAAGAGCTGACCTGAGGGATCAGGCGCAAGATGTGCTTGCACCGCCTGGTCGCGTCACAAAACCAACGGACAACGAAGAGAAGACGCGTCGCGCGGCCGAGCGTGAGGGCCGGCGGCGGGCCAGGCGTCTCAAGCGCGAGGCcacggccgccgccgccggcgccaCGCTGCCGCACCGGGACGGAGACTCCTCGGATGATGAGCTGCCTCCGCATGAGATGCATCACTACACACAGGAAAGAGACGCTATCCGTCAGCAATCCGCCTCGTTGTTCAGCGACGCGCTCCCCGCGTGGCGCAGCGTGTCGGGCGTGTGCAAGCGTCTCGCGCGCTGGAGAGCTCGCGCCGCAGACCTGTACACGGACGCCTATGTAGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGCTAATATTGTGGAACCCGCTGGCAGATGAAGACAACGAAGATTACGAGAGAATGGATTGGTACAAATGCTTGATGATGTACGGCGTCCGTACAGACCGCAGTGCAGACTCATCCTCGTCGGGGTCGGAAGGCGAGGCGGAGCCGCTGGCGGTCACGGACAGCTCCGTGCGAGAGGACCCCGACCTGCTGCTGGTGCCTAGCATCATCAGCAGGGTGGTGCTGCCTTGTCTCACAGGTATGATGTACGGCGTCCGTACAGACCGCGGTGCAGACTCATCCTCGTCGGGGTCGGAAGGCGAGGCGGAGCCGCTGGCGGTCACGGACAGCTCCGTGCGAGAGGACCCCGACCTGCTGCTGGTGCCTAGCATCATCAGCAGGGTGGTGCTGCCTTGTCTCACAGGTATGATGTACGGCGTCCGTACAGACCGCGGTGCAGACTCATCCTCGTCGGGGTCGGAAGGCGAGGCGGAGCCGCTGGCGGTCACGGACAGCTCCGTGCGAGAGGACCCCGACCTGCTGCTGGTGCCTAGCATCATCAGCAGGGTGGTGCTGCCTTGTCTCACAGGTATGATGTACGGCGTCCGTACAGACCGCGGTGCAGACTCATCCTCGTCGGGGTCGGAAGGCGAGGCGGAGCCGCTGGCGGTCACGGACAGCTCCGTGCGAGAGGACCCCGACCTGCTGCTGGTGCCTAGCATCATCAGCAGGGTGGTGCTGCCTTGTCTCACAGAGCTGGTGTCGGTGGCGTGGGACCCGGTGTCGGTGCGCTCGTGCACGCGCCTGCGCGGCCTGCTGCTGCGCGCGGCCGGCCTGCCCACGTGCGCCGGCGCAGTGCGGCGCCTGGCGGCCGGCCTGCGCGCGCGCCTGGCGCAGGCGCTGGGCGCCGATGTGTTCCTGCCTGCCCTGCCGCCTCAAGTAATGGAAGGTCCGGGCGGTGCGTTCTGGCGGCGTTGCTTGGGCGCGGGAGTGCGCCTACTGCGCGCGTCGCTGTCGCTCACGGGCCCGCCTGCGCTCTTGTATGCTGACCCACTCGTACTGTCGCTTATAGAAACGTTATGTACGGGCGCGGGCGCAGCGGGCGGGCCGCACGTGGCgcaggcggcggcggcgctgtCGGCCACGCTGCCGCGCGTCGGACACCTGCGCCGCCGAGCGCTCGCGCGGCTGGCCGCGCTCGCCACGCTGGCGCTGTCCCGGCTCGACAGTGATAACCCTATGCATTTGAAAGCTCTAGAACAAGCGAGAGCAGTGATCGCAGAGGCACGCGCGGTTGAATGA
- Protein Sequence
- MLRCKIRFRLGELQVEREATSETQKDLRDRLLTAARIRESRASRCGELDAAYRRAQAIRGYLTDLIECLDEKMPQLEALEARALNLHKRRCEFLIERRRADLRDQAQDVLAPPGRVTKPTDNEEKTRRAAEREGRRRARRLKREATAAAAGATLPHRDGDSSDDELPPHEMHHYTQERDAIRQQSASLFSDALPAWRSVSGVCKRLARWRARAADLYTDAYVADCLPKLLAPYVRHELILWNPLADEDNEDYERMDWYKCLMMYGVRTDRSADSSSSGSEGEAEPLAVTDSSVREDPDLLLVPSIISRVVLPCLTGMMYGVRTDRGADSSSSGSEGEAEPLAVTDSSVREDPDLLLVPSIISRVVLPCLTGMMYGVRTDRGADSSSSGSEGEAEPLAVTDSSVREDPDLLLVPSIISRVVLPCLTGMMYGVRTDRGADSSSSGSEGEAEPLAVTDSSVREDPDLLLVPSIISRVVLPCLTELVSVAWDPVSVRSCTRLRGLLLRAAGLPTCAGAVRRLAAGLRARLAQALGADVFLPALPPQVMEGPGGAFWRRCLGAGVRLLRASLSLTGPPALLYADPLVLSLIETLCTGAGAAGGPHVAQAAAALSATLPRVGHLRRRALARLAALATLALSRLDSDNPMHLKALEQARAVIAEARAVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -