Basic Information

Insect: Xestia ashworthii
Gene Symbol: Bcl11b
Assembly: GCA_950022955.1
Location: OX465568.1:5835066-5843862[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0032 0.45 12.6 2.1 2 23 73 94 72 94 0.96

2 12 0.037 5.1 9.3 0.2 2 23 101 123 100 123 0.92

3 12 0.47 65 5.8 0.4 2 23 131 153 130 153 0.90

4 12 9e-05 0.013 17.5 2.8 1 23 159 181 159 181 0.97

5 12 8e-08 1.1e-05 27.1 2.2 1 23 187 209 187 209 0.96

6 12 0.09 13 8.0 7.5 1 21 215 235 215 239 0.90

7 12 0.73 1e+02 5.2 1.1 3 19 255 271 254 276 0.90

8 12 5.1e-06 0.00071 21.4 1.8 1 23 620 642 620 642 0.98

9 12 9.5e-06 0.0013 20.6 6.8 1 23 649 671 649 672 0.95

10 12 0.00051 0.071 15.1 1.3 1 23 680 703 680 703 0.96

11 12 0.0038 0.53 12.4 4.4 1 23 709 733 709 733 0.96

12 12 4.2e-06 0.00058 21.7 2.1 1 21 739 759 739 760 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0032	0.45	12.6	2.1	2	23	73	94	72	94	0.96
2	12	0.037	5.1	9.3	0.2	2	23	101	123	100	123	0.92
3	12	0.47	65	5.8	0.4	2	23	131	153	130	153	0.90
4	12	9e-05	0.013	17.5	2.8	1	23	159	181	159	181	0.97
5	12	8e-08	1.1e-05	27.1	2.2	1	23	187	209	187	209	0.96
6	12	0.09	13	8.0	7.5	1	21	215	235	215	239	0.90
7	12	0.73	1e+02	5.2	1.1	3	19	255	271	254	276	0.90
8	12	5.1e-06	0.00071	21.4	1.8	1	23	620	642	620	642	0.98
9	12	9.5e-06	0.0013	20.6	6.8	1	23	649	671	649	672	0.95
10	12	0.00051	0.071	15.1	1.3	1	23	680	703	680	703	0.96
11	12	0.0038	0.53	12.4	4.4	1	23	709	733	709	733	0.96
12	12	4.2e-06	0.00058	21.7	2.1	1	21	739	759	739	760	0.95

Sequence Information

Coding Sequence: ATGGATTCGAATTTACCATTTTTTAGTCTCCCATTTGTGGATTCGGAGACTTCAGATTTTTTGTCGAAGATCAAGCCGCAGGAGTGTGCGTACGATGAGTTGCACGCCACATTACCATCCCACGGTGCTTTGTTGGGCCCTGACGATGTCTTGGCCCAGTTTCTATCTGGAGACGAACCGTTGGAGGAGCCCGACTTGAACGGTCCTACTACGTTGCACTGTGAGATCTGTAAGAAGCGGTTTGACAATGCTAAGAAGTATTATGGACATTTGAGAGTTCATTCCAAGGAAAATCTTTGGGTTTGTGAGCAATGTCCTGACCTGAAGTTCTCGACAAAGCAGCAGCTCATGAGACATGGCTTGATCCACAAGCCGCTTGGAAGGGAATGGAAGTGTCTGCAGTGCACCATGTCATTCGAGGCCCTGTGGAAACTGCAGCAGCATCTGTTTGCCAAACATTTGAACTACAAGCCTCATAAGTGTGATCAATGTGAGAAGTCATTCACGAAGGCTTCAGACTTGGATAAACATAAAACCATACACAGTGATCTGAAGAAGCATGCGTGTCCTGAATGTGACATGCGTTTCAAAGACAAGTCGAATCTGAAGCGACACATGCTGCGACACAATGGGGTCAAGCCTTTCTGTTGTTCGGGTTGCGGAAATAGATTTAAACAGctgtcatcaATGAAGCGTCACGCTCAGCACTGCAGGCACAACAAGGAGACCAGTGAAGCAGATAGGAGCTCCCGCAAGAACTACTGCCGCGCGTGTGGCATGAGCTTCCAGTACAAGAGCGCTTTGTTAGAGCACTGCGTCAGGCAACACACCAACAATGGAGGTGTTGCGCAGAACGCAAAACCGCCAGAACCGGACAAAGAAGATAAGAGCCATCTGAACGACACAAACCGTATCGTTGACAACATTGTCGACGATATCCTATCCGCTGAGGACGACTACATGACCATGCCAACGCAAAACGAGATACTCAACGTTTACAACCCAAATGATATCGACAATAACCCAGAAAACTTAATGCAAATcgaattattaaaagaaatgaatCAACTACACATTTTAGACGGAGAACTTTTCTACAATGACATAGATTTTGACAGCATTCAACCTAGTCACATGTTTAATACTAACACAAATGATATGGATTACGGCACCGATAAAAACGCTGAAATCTTATTCGACTTTACCGATGGAAGCAAAAGTATGGACCAGGATATCATGAACACTTTATTTCATGTCAAATCTGAGTACTTACCTGACGAATTGTTGAATCCACCAGAAATTGTAACTCCTCCTGCGAAAAGTAACGAATCAAACGATCACAATCATGTATCTGTGAACGAATGCGCTACTATATTTGAAAGTGACGTTGATTTAGAAGCTAGCACAAATCTAGCCGCAAACTTAAACCAGCTGATCGGTGAAAATAGTGTCCAATACATTTCTACAGAGGACGATgatacatttataataagttTAAATAGCGAAATTGATGCTGAACAATTAACCGATATGTTGAATATCGGCGTAGAGTTAGTTAATGATAAGAATAAGGAGCCAACTGTACCCGAAATTAAGCAAGAAAAAGTAAGTTTAGCTAATGTGGAGCTTTATGTAAAGTTTGATAAACCTTTCCAAGTGAAAGAGCCCCAAATTAAGCCTATAGAAGAGCGCGTAAAACACCGACCTGTACTTGTTAAACTTAAAGAGCCTATGAGTGAACCGTCTATGAGTGAACCGTCTATGAGTGAACCACCAATGAGTGAACCCCCAATAAGTTTGGTGGCCACGGAAGAGAAGAAGAATGTTATTAAAAGAAAGCCTAAGACAAGGGTGCTGTATGTTTGTCGAACATGCAATAAGGTGTTTAAGAAGAACGATAATTATAAGTCTCATATAGCAACGCACGAGCCATCGCTTCGGCGGCACAAGTGCAAGATCTGCGGCGAACGCTTCAGCTACCGTTCGACGCTGAACAAACACACGCGCAACCACCACACGCCCTTCGTCCCGTTGGAGCATAGCTGCCAGATTTGTGAACGGAACTTCAAGTTCGCGTGGATGTTGAGAGAGCACATGGAGCGCGACCACGACGGACTGACGCCGCACACGTGCGACTACAAGGACTGTAGCAAGAGATTCTTCAAGAAATCGGACCTGGCCGTGCATAAAAGGTACCACACTGGAGAGCGTCCGTACTCTTGCGAGGTGTGCAAGAAAACGTTCCCCCACGCCAGCCATCTCAAGAGACACGAGCGGTCCGTTGACTGCACCAAACTgaCACCCTCATTacctcaaaaagaaaagaagcttCTGAAGAGCAACTgtgatattaaaattaaacgtaaaataaattaa
Protein Sequence: MDSNLPFFSLPFVDSETSDFLSKIKPQECAYDELHATLPSHGALLGPDDVLAQFLSGDEPLEEPDLNGPTTLHCEICKKRFDNAKKYYGHLRVHSKENLWVCEQCPDLKFSTKQQLMRHGLIHKPLGREWKCLQCTMSFEALWKLQQHLFAKHLNYKPHKCDQCEKSFTKASDLDKHKTIHSDLKKHACPECDMRFKDKSNLKRHMLRHNGVKPFCCSGCGNRFKQLSSMKRHAQHCRHNKETSEADRSSRKNYCRACGMSFQYKSALLEHCVRQHTNNGGVAQNAKPPEPDKEDKSHLNDTNRIVDNIVDDILSAEDDYMTMPTQNEILNVYNPNDIDNNPENLMQIELLKEMNQLHILDGELFYNDIDFDSIQPSHMFNTNTNDMDYGTDKNAEILFDFTDGSKSMDQDIMNTLFHVKSEYLPDELLNPPEIVTPPAKSNESNDHNHVSVNECATIFESDVDLEASTNLAANLNQLIGENSVQYISTEDDDTFIISLNSEIDAEQLTDMLNIGVELVNDKNKEPTVPEIKQEKVSLANVELYVKFDKPFQVKEPQIKPIEERVKHRPVLVKLKEPMSEPSMSEPSMSEPPMSEPPISLVATEEKKNVIKRKPKTRVLYVCRTCNKVFKKNDNYKSHIATHEPSLRRHKCKICGERFSYRSTLNKHTRNHHTPFVPLEHSCQICERNFKFAWMLREHMERDHDGLTPHTCDYKDCSKRFFKKSDLAVHKRYHTGERPYSCEVCKKTFPHASHLKRHERSVDCTKLTPSLPQKEKKLLKSNCDIKIKRKIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01527643;
90% Identity: iTF_00712222;
80% Identity: -