Basic Information

Insect: Xestia ashworthii
Gene Symbol: -
Assembly: GCA_950022955.1
Location: OX465577.1:5442323-5448447[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.017 2.4 10.3 0.6 1 23 24 46 24 46 0.98

2 16 4.8 6.6e+02 2.6 0.0 3 23 73 94 71 94 0.89

3 16 0.89 1.2e+02 4.9 0.4 3 23 118 139 116 139 0.93

4 16 0.00037 0.051 15.6 0.5 3 23 147 168 146 168 0.97

5 16 3.6e-05 0.0051 18.7 1.8 3 23 175 196 174 196 0.97

6 16 0.012 1.7 10.8 1.3 1 23 202 225 202 225 0.94

7 16 5.1e-05 0.0071 18.3 1.6 2 23 232 254 231 254 0.95

8 16 0.027 3.7 9.7 1.3 1 23 260 282 260 282 0.93

9 16 0.03 4.2 9.6 0.4 1 23 362 384 362 384 0.93

10 16 0.27 38 6.5 1.0 2 23 456 478 455 478 0.94

11 16 0.00025 0.035 16.1 0.1 2 23 483 505 482 505 0.96

12 16 0.00011 0.016 17.2 1.5 2 23 509 531 508 531 0.93

13 16 0.0051 0.71 12.0 0.3 2 23 537 559 536 559 0.93

14 16 0.0045 0.63 12.1 3.7 1 23 566 589 566 590 0.95

15 16 0.011 1.5 11.0 1.4 2 23 596 617 595 617 0.93

16 16 9e-07 0.00013 23.8 1.6 1 23 623 645 623 645 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.017	2.4	10.3	0.6	1	23	24	46	24	46	0.98
2	16	4.8	6.6e+02	2.6	0.0	3	23	73	94	71	94	0.89
3	16	0.89	1.2e+02	4.9	0.4	3	23	118	139	116	139	0.93
4	16	0.00037	0.051	15.6	0.5	3	23	147	168	146	168	0.97
5	16	3.6e-05	0.0051	18.7	1.8	3	23	175	196	174	196	0.97
6	16	0.012	1.7	10.8	1.3	1	23	202	225	202	225	0.94
7	16	5.1e-05	0.0071	18.3	1.6	2	23	232	254	231	254	0.95
8	16	0.027	3.7	9.7	1.3	1	23	260	282	260	282	0.93
9	16	0.03	4.2	9.6	0.4	1	23	362	384	362	384	0.93
10	16	0.27	38	6.5	1.0	2	23	456	478	455	478	0.94
11	16	0.00025	0.035	16.1	0.1	2	23	483	505	482	505	0.96
12	16	0.00011	0.016	17.2	1.5	2	23	509	531	508	531	0.93
13	16	0.0051	0.71	12.0	0.3	2	23	537	559	536	559	0.93
14	16	0.0045	0.63	12.1	3.7	1	23	566	589	566	590	0.95
15	16	0.011	1.5	11.0	1.4	2	23	596	617	595	617	0.93
16	16	9e-07	0.00013	23.8	1.6	1	23	623	645	623	645	0.99

Sequence Information

Coding Sequence: ATGAGGAATAACGTAGTAGAAGTCCTAACAAAATCCACCGTCATGCCTTTCCGGTGGCTAAAAAGTTCATATAGGTGTTTCTACTGCTATGATATCTTCCAAGAGGCCTCCGAATTAAAAATTCATCAGCAAGTACACACGGGAGACGCTATCAAAGTCCAAGCTATGAAGAATTATTGGGAACCCGTTGTTTATATCGATGTATCGAACCTAGCGTGTACTCTTTGCCCGGATAAAATCACAGATTTATACGATTTAATTGATCATTTAATTGCAATGCATGGCATTGACTATAACAAAGATGTCGGAATATGTATGGTGGCTTTCAAACTAGATACTTTTAATGTTAGCTGTCTCGCTTGCGGTGCGAATTTCTACACATTTGGGCCTCTACTTCATCACACAAATAAAGATCATAAAGGAACTTCAGCTATACTTTGCGAAGTCTGCGGGCAGCATTTTAAAGATGCGAACTTACTCCGACTTCATGTTAAATCTGTACACGAAAACGCTCTTATTCTTTGCACTGAGTGCGGTGAAAAATTTGACTCTAAGTCGAAATTGAAAACGCATCAGAAAAACAGCCACGATATGGAAAAGAAATACAAATGTGCGGACTGTTCCGAAGTATTTCAGAGTCATTATAAGCGGTCCCGACACATGGCAGCTGAGCATAAGAAGAAGCCAGAAATCAAATGCCCTCACTGTCCGAAGACCTTTGTCTTCAGAAGCATGATGATGACACATTTACGGGATTCTCATCTTAAATTCCGCAACCATATATGCGGAGTGTGTGGTTGGAAAGCCTTTAACAGCAATCGGTTGAAAAACCACATGTATAAGCATAGCGGAGAAAAGAACTTCAAATCCGCGAAAGAAAATAGAAACATCAATCCGTGTCTAGGAGAGAAAATCCAAAGAATCTGCAAAAACTTTGTGGATATTCTGGATTCTACAGCTTTACCCTTTAAAGCTACGAACTACCGAATATCAGAAGAAAGACGAAAAGATCAGCTCGCGACATTACTGACAATCATCATAGAAAACTCAACGATACTCCCTTTTAGGTGGAACAGAAGCCAGTTCATGTGCTTCTACTGCCAAGCTTTCTTCGTCGAAAGCGCTCAACTTCGAGAACACGCTTACGAACATAGCGAGATCAAAATCAAAGATGTCATTATAAGAACACTGTATAAAGGTGGGAAGACAAAGCTAGACATCTCAAATCTTTGGTGCACCAGCTGCCCAAGCCAATTCGATAACTTCCAAGAGTACTTTGACCATCTCTCAGAAACACATGGCCTTAGGATGGAAGAAGAAGTCTCAAAGTTATTTGACTGTTTCCAGCTAGATGACAATGGAATGTCCTGCCTGGAATGTGGACAGTACTTCAGATTCTTTGGACCGTTGCTGGCACATACGCACAAATATCATGTTGAGCAGGTTGTATGCGAAATCTGTGGACAAGGGTTCCCTGATAAGCATAATGTACTCAACCATGTTAAAGTCATGCATGGAATCAAGTCTTGTAAGCATTGCAATGAAATTTTTAGAACACAATACGCGTTGACGAATCACGTAGAAAATGTGCATAGGACTGATAAGCTAAAATGCCCGATGTGCCCAAAAATACTAAGAAATAGATACTTAAAGAAACGCCACCTAGCATTGGTCCATGACTGTAAAAGTGCACAGTTCATATGCGAATTCTGTTCGAAAATTTTCACcagaaataataaattcataCAACATAAGCTCCGGGTGCATCACAAAGAGAAAAATTGTACCTGCGAAGTTTGTGGGCACAAGACTTTTAATGAGGAAGGGCTGAAAGTACATATGGTGGTACATGGCGAAGAGAGGCCTTTCAAATGTGGGACTTGCGAGAAGGCTTTTCGAAGAAAAAAGAATCTTGTTGGGCATATGAAGACGCATGGAAAAGATAAGATGAAGACTGTTGTGCAAGTTGATAATATTGATGACTTAGTATTAGAAGGTTCTGAATAA
Protein Sequence: MRNNVVEVLTKSTVMPFRWLKSSYRCFYCYDIFQEASELKIHQQVHTGDAIKVQAMKNYWEPVVYIDVSNLACTLCPDKITDLYDLIDHLIAMHGIDYNKDVGICMVAFKLDTFNVSCLACGANFYTFGPLLHHTNKDHKGTSAILCEVCGQHFKDANLLRLHVKSVHENALILCTECGEKFDSKSKLKTHQKNSHDMEKKYKCADCSEVFQSHYKRSRHMAAEHKKKPEIKCPHCPKTFVFRSMMMTHLRDSHLKFRNHICGVCGWKAFNSNRLKNHMYKHSGEKNFKSAKENRNINPCLGEKIQRICKNFVDILDSTALPFKATNYRISEERRKDQLATLLTIIIENSTILPFRWNRSQFMCFYCQAFFVESAQLREHAYEHSEIKIKDVIIRTLYKGGKTKLDISNLWCTSCPSQFDNFQEYFDHLSETHGLRMEEEVSKLFDCFQLDDNGMSCLECGQYFRFFGPLLAHTHKYHVEQVVCEICGQGFPDKHNVLNHVKVMHGIKSCKHCNEIFRTQYALTNHVENVHRTDKLKCPMCPKILRNRYLKKRHLALVHDCKSAQFICEFCSKIFTRNNKFIQHKLRVHHKEKNCTCEVCGHKTFNEEGLKVHMVVHGEERPFKCGTCEKAFRRKKNLVGHMKTHGKDKMKTVVQVDNIDDLVLEGSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00302429;
90% Identity: -
80% Identity: -