Basic Information

Gene Symbol
Gata5_1
Assembly
GCA_963575645.1
Location
OY754466.1:36322241-36342345[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.7e-17 2.4e-13 49.9 2.0 1 35 460 493 460 494 0.97
2 2 2.1e-19 1.4e-15 57.1 5.1 1 35 516 549 516 550 0.98

Sequence Information

Coding Sequence
ATGGAAGGTGATCAAAACATAAACAAACAAGAAACAGAAGGAGATGTGAATCCAAGTCCTGAAACCAGcgaagaaaaatctaaaaaagaaACTGAAGTGTCGACTTTTCAGTCTGTCATCACATCTCAGCATTCTCAGAGACACGTTCGGATTATAACTACGGCGGGACACATAACCGAACAAAATTACGAATCACAATCTGAAGAAAATTGTGAAGATGGCAAAGAAACCGTCGAAACAAATTCAGCTTCAGTAACAAACAATTCACCGTTGGCTTCAGAATGCGACGGCAAAAAGAATGAAACGTCGCCCATAAATTATGAAACATCAGTAAGTGATCAGCAGCAAGTTCGTTATGATGTTGTCAAATCTGATAACAGTTCTGAAGGCGTCGATCAAAAGCACTACACAAATGCACAAGCTCAAGCTGTTAATTATGACACGGCTACATCAATTGAGAATATAAGATATGTTCAAACAACAACATCAACAGGTATGATCGAAACGAGAGAAATAATCACGTCCAGTGGACACGTGAAATATTCTCCGGATCAAAGTGACAACAGACGATATTCAGACCCTAACGCCGTTGTCAGAATGCAGACGAACAACAGATACGAAGCGTCTCCTGCTACGTCTCAGGAAGCTTCTCACGATTATCAACACGAATATCAAGCGTCACCCCAAACCATCGAATTAGTAGCCACGTCAGCAGCTCATCAACAACATCACAACATTATATATGAAGGCGATACGATCAAATATGAACAAGATATTGAAGCGAAGCCAACAATTTATACAAATCTCGATGCCGTGTCATCAGTTCAACAACAACAGAACGGCTTTACCCAAAGTAATCACATCTACAGTGAAGCTGGACAATATCATCATCCAACCTCACAGCCACCTACTTACACTTCGTATGTATCGTTGGTTCGGGGTAATGTGGAAAGTCCACCAAATCCTATCTTATATAGAACTGATCCGACGTTGTCATCGATATCGGGAACAAAGAATATGACCTACAATCAACTCCAGCAGAACCAAGCACAGGCACTATACGAGGCGTCTGGATCTCCGACACCCCAACAAGTGACGCTGTACGGGAACAATAATACTTTTCAGTATGTTCCCGCTtcaggaaataataataaaatgacgtCGGATTATTGGCCGAACGGTTCGGCGAACATTGATGGTTACGGTTATTCGACGTCGGCTGCTCAAGGTTTGAATATTTCGAGTGGAGAAAATGCGGTTTCGTTGGGATATTCTGGCTATGTTGCCAATGGAGCCGGTTCGTCAGGAGGGTGGATGGCTCTTGATGACAATTATGAAGGAGGACCAATGGTCAGCGGGATGGAAGTAGTGAAAGAGTGCGTCAACTGTGCAGCGAGTGTTACGCCGTTGTGGCGTCGCGACGGCACCGGCCACTACTTGTGTAATGCATGCGGCTTATACAATAAGATCAATGGCGTCAATCGACCACCTGTACGTACCACGAAAAAAACGCCAACGTCAGGGAACCGGAGGACTGGTGTAACATGTGCCAACTGTCATACGTCCAGCACTACACTGTGGAGGAGGAACAACAATGGGGAGCCTGTTTGTAATGCCTGCGGTCTATATTTTAAACTGCATGGGgtaaATCGACCGCTTAGCATGAAAAAAGAATGCATTCAAACAAGAAAAAGGAAACCAAAGAATCCCTCGTCAATGGGCGCTGCTCAACTTACGATTGCTGGTCCGTCTGGAGTTCATGTTAGACATAATACAAtgttgCCACCAATGTATCAAACCCGACTGCATGAAGAATATGCTAACAATGCACAAAATAATCACCAGGTACCTGAGCAATACATAACAACATCCGGTCCGTCATCTTTGATGTTGCCATCTACTCCGACGCTCAGCAATCATATTGCAGCTAGCGTGCCTCCATTGGAACCAATGACTTCACGATCAGTTCAAGATAGTATCACTAGCGGTGGAGTAATTACATCCACATCGGTTGCTAATAATGAACGAGATATCGCTCGCTCCAGTTAA
Protein Sequence
MEGDQNINKQETEGDVNPSPETSEEKSKKETEVSTFQSVITSQHSQRHVRIITTAGHITEQNYESQSEENCEDGKETVETNSASVTNNSPLASECDGKKNETSPINYETSVSDQQQVRYDVVKSDNSSEGVDQKHYTNAQAQAVNYDTATSIENIRYVQTTTSTGMIETREIITSSGHVKYSPDQSDNRRYSDPNAVVRMQTNNRYEASPATSQEASHDYQHEYQASPQTIELVATSAAHQQHHNIIYEGDTIKYEQDIEAKPTIYTNLDAVSSVQQQQNGFTQSNHIYSEAGQYHHPTSQPPTYTSYVSLVRGNVESPPNPILYRTDPTLSSISGTKNMTYNQLQQNQAQALYEASGSPTPQQVTLYGNNNTFQYVPASGNNNKMTSDYWPNGSANIDGYGYSTSAAQGLNISSGENAVSLGYSGYVANGAGSSGGWMALDDNYEGGPMVSGMEVVKECVNCAASVTPLWRRDGTGHYLCNACGLYNKINGVNRPPVRTTKKTPTSGNRRTGVTCANCHTSSTTLWRRNNNGEPVCNACGLYFKLHGVNRPLSMKKECIQTRKRKPKNPSSMGAAQLTIAGPSGVHVRHNTMLPPMYQTRLHEEYANNAQNNHQVPEQYITTSGPSSLMLPSTPTLSNHIAASVPPLEPMTSRSVQDSITSGGVITSTSVANNERDIARSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01511879;
90% Identity
iTF_01511879;
80% Identity
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