Vnig019229.1
Basic Information
- Insect
- Venustoraphidia nigricollis
- Gene Symbol
- Gata5
- Assembly
- GCA_034508555.1
- Location
- JAVRKA010000086.1:1270659-1287018[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-17 2.4e-13 50.0 2.0 1 35 457 490 457 491 0.97 2 2 2.1e-19 1.4e-15 57.1 5.1 1 35 513 546 513 547 0.98
Sequence Information
- Coding Sequence
- ATGGAAGGTGATCAAAACATGAATAAACAAGAAACAGAAGGAGAGGTGAATCCAAGTCCTGAAACCAGCGAAGAGAAATCTAAAAAAGAAACTGAGATATCGACTTTTCAGTCTGTCATAACATCTCAACATTCTCAGAGACACGTTCGAATTATAACTACGGCCGGACACATAACCGAACAAAATTACGAATCACAACCTGAAGAAAATTGTGAAGAAAGTAAAGAAACCGTCGAAACAAATTCAGCTCCAGTTACAAACAATTCACCGTTGGCTTCAGAATGCGATGGTAAAAAGAGTGAATCGTCGCctataaattatgaaacatCAGTCAGTGACCAACAGCAAGTTCGTTATGATGTTGTCAAATCTGATAACAGTTCTGATCAAAAGCATTACACAAATGCACAATCTCAAGCTGTTAATTATGATACGGCAACATCAATTGAGAATATAAGATATGTTCAAACAACAACATCAACAGGTATGATCGAAACAAGAGAAATAATTACTTCTAGTGGACATGTGAAATATTCTCCGGATCAAAGTGACAATAGACGATATTCAGACCCTAACGTAGTGGTCAGAATGCAGACAAATAACAATAGATACGAAGCATCTCCTGCTGCGTCTCAGGAAGCTTCTCACGATTATCAGCACGAATATCAAGCATCACCTCAAACCATCGAATTAGTAGCCACGTCAGCCCATCAACAGCACCATAACATTATATATGAAAGTGATGCGATCAAATACGAACAAGATATTGAGGCTAAACCGACAATTTATACAAATCTTGATGCTGTTTCATCAGTTCAACAACAACAGAACGGTTTCACCCAAAGTAATCACATCTATAGTGAAGCTGGACAATATCACCAGCCAACCTCACAACCACCCACTTACACGTCGTATGTATCGTTGGTTCGAGGTAATGTGGAAAGTCCACCAAATCCTATCCTGTATAGAACTGATCCGACATTGTCATCGATATCGGGAACAAAGAATATGACATACAATCAACTCCAACAGAACCAAGCACAGGCATTATACGAGGCGTCTGGATCACCCACACCACAACAAGTTACGCTGTACGGGAGTAATAACAGTTTCCAGTATGTTCCCGCTTCAGGGAACAATAACAAAATGACGTCCGATTACTGGCCCAACGGTTCGACGAACATTGATGGTTACGGTTATTCGACGTCGGCTGCGCAAGGTTTGAATATTTCGAGTGGAGAAAGTGCGGTTTCGTTGGGATATTCTGGCTATGTTGCCAACGGAGCCGGTTCGTCAGGCGGGTGGATGGCTCTTGACGACAGTTATGAAGGAGGACCAATGGTCAGCGGGATGGAAGTAGTGAAAGAGTGCGTCAACTGTGCAGCGAGCGTTACGCCATTGTGGCGTCGGGACGGTACCGGCCATTACCTGTGTAATGCATGCGGCTTATATAATAAGATCAATGGCGTCAATCGACCACCTGTACGTACCACGAAAAAAACGCCAACGTCAGGGAACCGAAGGACGGGCGTAACATGTGCCAACTGTCATACGTCCAGCACTACACTTTGGAGGAGAAACAATAATGGGGAACCTGTTTGCAATGCCTGTGGTCTATACTTTAAACTGCACGGGGTAAATCGACCACTAAGCATGAAAAAAGAATGCATTCAAACAAGAAAAAGGAAACCAAAGAATCCCTCATCAATGGGCGCTGCTCAACTGACCATTGCTGGCCCGTCTGGAGTTCACGTTAGACATAATACAAtgttgcCACCAATGTATCAAACCCGACTGCATGAAGACTATGCCAATAATTCACAAAATAATCACCAGGTGCCCGATCAATACATATCTACATCCGGTCCATCACCTTTGATGTTACCATCCACTCCAACGCTCAGCAATCATATTGCATCTAGCGTGCCTACATTAGAACCAATGACTTCGCGATCAGTTCAAGATAGTATCACTAGCGGTGGAGTAATTACATCAACATCGGTTGCCAATAATGAACGAGATATCGCTCGCTCCAGTTAA
- Protein Sequence
- MEGDQNMNKQETEGEVNPSPETSEEKSKKETEISTFQSVITSQHSQRHVRIITTAGHITEQNYESQPEENCEESKETVETNSAPVTNNSPLASECDGKKSESSPINYETSVSDQQQVRYDVVKSDNSSDQKHYTNAQSQAVNYDTATSIENIRYVQTTTSTGMIETREIITSSGHVKYSPDQSDNRRYSDPNVVVRMQTNNNRYEASPAASQEASHDYQHEYQASPQTIELVATSAHQQHHNIIYESDAIKYEQDIEAKPTIYTNLDAVSSVQQQQNGFTQSNHIYSEAGQYHQPTSQPPTYTSYVSLVRGNVESPPNPILYRTDPTLSSISGTKNMTYNQLQQNQAQALYEASGSPTPQQVTLYGSNNSFQYVPASGNNNKMTSDYWPNGSTNIDGYGYSTSAAQGLNISSGESAVSLGYSGYVANGAGSSGGWMALDDSYEGGPMVSGMEVVKECVNCAASVTPLWRRDGTGHYLCNACGLYNKINGVNRPPVRTTKKTPTSGNRRTGVTCANCHTSSTTLWRRNNNGEPVCNACGLYFKLHGVNRPLSMKKECIQTRKRKPKNPSSMGAAQLTIAGPSGVHVRHNTMLPPMYQTRLHEDYANNSQNNHQVPDQYISTSGPSPLMLPSTPTLSNHIASSVPTLEPMTSRSVQDSITSGGVITSTSVANNERDIARSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01531639;
- 90% Identity
- iTF_01531639;
- 80% Identity
- -