Basic Information

Insect: Xanthostigma xanthostigma
Gene Symbol: PRDM15_1
Assembly: GCA_963575645.1
Location: OY754467.1:33023042-33025816[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00053 0.011 16.7 5.5 1 23 583 605 583 605 0.99

2 11 0.00021 0.0043 17.9 1.7 1 23 611 633 611 633 0.95

3 11 0.051 1 10.4 2.7 1 23 639 661 639 661 0.99

4 11 4.9e-05 0.001 19.9 1.2 1 21 667 687 667 688 0.95

5 11 2.4e-05 0.0005 20.9 1.4 1 23 695 718 695 718 0.96

6 11 0.039 0.8 10.8 1.2 1 23 724 746 724 746 0.95

7 11 1.8e-05 0.00037 21.3 3.8 1 23 752 774 752 774 0.97

8 11 2.2e-05 0.00046 21.0 2.0 1 23 779 801 779 801 0.98

9 11 0.025 0.51 11.4 1.2 1 23 807 829 807 829 0.96

10 11 6.9 1.4e+02 3.7 1.5 2 23 837 856 836 856 0.92

11 11 7.1e-05 0.0015 19.4 0.4 1 23 862 885 862 885 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00053	0.011	16.7	5.5	1	23	583	605	583	605	0.99
2	11	0.00021	0.0043	17.9	1.7	1	23	611	633	611	633	0.95
3	11	0.051	1	10.4	2.7	1	23	639	661	639	661	0.99
4	11	4.9e-05	0.001	19.9	1.2	1	21	667	687	667	688	0.95
5	11	2.4e-05	0.0005	20.9	1.4	1	23	695	718	695	718	0.96
6	11	0.039	0.8	10.8	1.2	1	23	724	746	724	746	0.95
7	11	1.8e-05	0.00037	21.3	3.8	1	23	752	774	752	774	0.97
8	11	2.2e-05	0.00046	21.0	2.0	1	23	779	801	779	801	0.98
9	11	0.025	0.51	11.4	1.2	1	23	807	829	807	829	0.96
10	11	6.9	1.4e+02	3.7	1.5	2	23	837	856	836	856	0.92
11	11	7.1e-05	0.0015	19.4	0.4	1	23	862	885	862	885	0.97

Sequence Information

Coding Sequence: ATGGATAACAGTAAAAACATTCCAATTCAACAAAATACGATAAACGATGTGTACACTGAGAATTATGTACGATCAAATTGCGCTGAAATCAATTCCCAACAAAGTTCTGGAAGCGAAAGAGCACAAAATTTTCTACCTTACAGTTTGCCAATGCCGGTGACAAGCAGCATGTCGCAGTCGTTAATGTATAGCACGCAAAGTCAACCGTTGTACAATATCATGTATGGGTCGCAAGGAATGTACACGAATCAGAATTCGTTTCCAGCATCTACATTCAATACATATACATCTCAAGTTGAGACGGCATGGTTTTCAGATTCATGCATCACTGCCACTGCTAATGAAAcgattaaactaaaaaatgcaaaaCCTGACAAGATAACGAATGAAAAAATTAGTCCACAAAGTTGCTGCAGCAGCAACCAATTAGAAAGCATTGCTATCGGTATTTGTTCTCCGCTGAGTGATACGTTCAAAGCTTTAACGAGTAAAGATACAGCTATGTTTCACAACAAGCCCAATATGCTGGATTCGCAGTGGTACTACGGAAGTGGTTATAATTCGCAAAAATATAACGATCTGCCTTCTTGTTCTCAGCTCGGACAGATAGATATTTCCGATCAGCTGACTCCTAATCAGAGTCCCTGCTGCCGAGATATGTCGCTGTGTCCCGATCAGTTTAAGAGTACAACGCCGGTAAAATATTGTAGTATACAGAAAAACAATGAAGTTgaacatttgaaaaatttttcaccGACAATACAAATGCCACCCTttgttacaaataataaatttatatcggAGCCGTACAGTACAAATTTGTACACTCCCGGAGACGTACCCCCTTTGAGATTAGACGATAAAATAATAGAGACGAAGAATTTTCCCAGCTGTCAGATCGACGGAACTAGATGCGAACTTGAACCGTGCGACATGTTAAGAGTTCAGTCATCTTGTCTTCAAGATTCGTGTGCCAGCATTGCCGGCAACTGTGATCTCACTGTGCAGAGCAATGCGTTTTTTCCTAACGATGACGTCAGCTGTATGGAATTGTACCAAGATCCGGACCCAAGTAAACTGGACATTACAAAGCCTGAAAGTCAATGCGGAGGAGAGAGTGATATAATTGTAGAAGATTCTGATGACGACTCAACTGACATTAGCGATGACGGTGATAGAAGCAACCGAGTTGTTTATACCTGTGCTATATGTAACGTGTCCTCTTCGGGCGAACTTATGTATTTTTGTGTGGGTGACGATACTTTACTAACTAGTACGACGCAAACtcctattgtaaaaaaattagttgatattataaaatacaagTTTCCTAAATCTCCGCTGGATCACATATGCAAtgtttgtttaaatttaatcaACACAGTTGATTGTTTAGAAGCAAAGTTAGAGCGCGCTAAGAAACAACTGTTTCAAATATTTCAGAAAACTAATGCTGCGCTCGGaaatattgcaataaaaaatattgattcacAGTATCTCTTGAACGAGCGAgttgaaaaggaaaaaaaattagaaaggaCGTACGAATTTCAAAACTCTCCAGCGAAAGAAAAATCGAGTAATACGCTGGGGAATACGGAAGAAGCTGCAGCTGCTGAAGTTAAATTGGATGCAGTACAAGAACCCGATTTTAGTCAGAACAAACGAATCTGCAAAATTTGTAATAAGTACTTTTGTCAAAGCGACGTTCACAAACATAAACAACTGCACGCTAATCATATCAGTTTTAAATGCACTTTGTGTCATAGAAGTTTTACGATGAAGCGATTGTTAGACAATCACATGAAGAGGCACAGTGGTCAAAGAGATTTCTTGTGTGATCGATGTGGTAGGACTTACACGaaaaaatacagtttagaaatgCACGTTCGCCGACACGAAAAACAATACGGCTATTACTGTGAAGTTTGCAAACGAGGTTTCGTTTGTTTCACGTCGCTCGAAGCGCACCGCCGTACACATTCCGATATAAAACGGTTTGATTGTAAAATCTGTCAGAAAAAGTTCCGGACAAACACGAATTTACAAGAACATGTAAGATATTGTTCTGGCGATTTGCCGTTTCAGTGTGAACAGTGCGATAAAAAATTTGCTACTTCCTCGAAATTAAACGATCATGTTAAATTAAAACACGATAAGGTGTATAAATTTCTTTGTAGCGAATGTAAAATGGGATTTATAATTGAATCACACTATAAAGCGCATCTTACGACACATTCGGACGAAAAACCGTTTAAATGTGAGATTTGTGGAAAATGCTACAAGACGCTAGGAAATTTAAATCATCACAAAATAATTCATAAGGAATTGCCTTTTAAGTGTCAAATATGCGACAAAGGTTTTAAACGCAGAGAGaattttgaaatacataaaaacaatcaTTCAGGTTTAAAGCCTTTTACTTGTTCTGTATGTGATAAAAAGTTTGCCGCACAAAAATTTTTAGACCAACATTCAAAGCTGCACAGCGGCAATATCAAGAAGAAAGTTTGTAAAGTTTGCAATAAACAGTTGAGTCACGGCTTAGCCGATCATATGAGGCTTCATTCCGgtgttaaaatgtttaaatgcaACATTTGTTCTGTGATGTTTATAACCAACGGTGCCTTAAGAAAGCATATTATTAGAAAGCATAAGGAAAAATAA
Protein Sequence: MDNSKNIPIQQNTINDVYTENYVRSNCAEINSQQSSGSERAQNFLPYSLPMPVTSSMSQSLMYSTQSQPLYNIMYGSQGMYTNQNSFPASTFNTYTSQVETAWFSDSCITATANETIKLKNAKPDKITNEKISPQSCCSSNQLESIAIGICSPLSDTFKALTSKDTAMFHNKPNMLDSQWYYGSGYNSQKYNDLPSCSQLGQIDISDQLTPNQSPCCRDMSLCPDQFKSTTPVKYCSIQKNNEVEHLKNFSPTIQMPPFVTNNKFISEPYSTNLYTPGDVPPLRLDDKIIETKNFPSCQIDGTRCELEPCDMLRVQSSCLQDSCASIAGNCDLTVQSNAFFPNDDVSCMELYQDPDPSKLDITKPESQCGGESDIIVEDSDDDSTDISDDGDRSNRVVYTCAICNVSSSGELMYFCVGDDTLLTSTTQTPIVKKLVDIIKYKFPKSPLDHICNVCLNLINTVDCLEAKLERAKKQLFQIFQKTNAALGNIAIKNIDSQYLLNERVEKEKKLERTYEFQNSPAKEKSSNTLGNTEEAAAAEVKLDAVQEPDFSQNKRICKICNKYFCQSDVHKHKQLHANHISFKCTLCHRSFTMKRLLDNHMKRHSGQRDFLCDRCGRTYTKKYSLEMHVRRHEKQYGYYCEVCKRGFVCFTSLEAHRRTHSDIKRFDCKICQKKFRTNTNLQEHVRYCSGDLPFQCEQCDKKFATSSKLNDHVKLKHDKVYKFLCSECKMGFIIESHYKAHLTTHSDEKPFKCEICGKCYKTLGNLNHHKIIHKELPFKCQICDKGFKRRENFEIHKNNHSGLKPFTCSVCDKKFAAQKFLDQHSKLHSGNIKKKVCKVCNKQLSHGLADHMRLHSGVKMFKCNICSVMFITNGALRKHIIRKHKEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01511446;
90% Identity: iTF_01511446;
80% Identity: -