Basic Information

Insect: Xanthostigma xanthostigma
Gene Symbol: -
Assembly: GCA_963575645.1
Location: OY754474.1:16157390-16163269[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0019 0.039 14.9 4.7 2 23 146 167 146 167 0.97

2 11 0.00068 0.014 16.3 0.6 3 23 177 197 175 197 0.97

3 11 0.0066 0.14 13.2 0.5 1 23 203 226 203 226 0.97

4 11 4.2e-05 0.00087 20.1 1.2 2 23 232 253 231 253 0.98

5 11 0.0017 0.035 15.1 2.9 1 23 258 280 258 280 0.97

6 11 1.8e-05 0.00036 21.3 0.1 1 23 316 339 316 339 0.97

7 11 0.0014 0.029 15.3 1.9 1 23 345 367 345 367 0.98

8 11 3.6e-06 7.4e-05 23.5 1.0 3 23 378 398 377 398 0.99

9 11 0.00018 0.0036 18.2 1.1 1 23 404 426 404 426 0.98

10 11 0.00043 0.0089 17.0 3.4 1 23 432 454 432 454 0.98

11 11 4.4e-06 9e-05 23.2 2.5 1 23 460 482 460 482 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0019	0.039	14.9	4.7	2	23	146	167	146	167	0.97
2	11	0.00068	0.014	16.3	0.6	3	23	177	197	175	197	0.97
3	11	0.0066	0.14	13.2	0.5	1	23	203	226	203	226	0.97
4	11	4.2e-05	0.00087	20.1	1.2	2	23	232	253	231	253	0.98
5	11	0.0017	0.035	15.1	2.9	1	23	258	280	258	280	0.97
6	11	1.8e-05	0.00036	21.3	0.1	1	23	316	339	316	339	0.97
7	11	0.0014	0.029	15.3	1.9	1	23	345	367	345	367	0.98
8	11	3.6e-06	7.4e-05	23.5	1.0	3	23	378	398	377	398	0.99
9	11	0.00018	0.0036	18.2	1.1	1	23	404	426	404	426	0.98
10	11	0.00043	0.0089	17.0	3.4	1	23	432	454	432	454	0.98
11	11	4.4e-06	9e-05	23.2	2.5	1	23	460	482	460	482	0.98

Sequence Information

Coding Sequence: ATGATTACTGCTTGCACGACTATTAAGATAACCAAATGCGATGGGTTGCCCGAATATATTTGTGACAAATGTCTCAAGAACGTCACAATCGCttacgattttaaatttttatcggAAAAATCGGATTCGTTACTCCGCAAAATGGTTGAAAATAGTAAAGTAGAAGAAAGTAACGGTATTAAATTGGAATCTGAAGATACATGCGATGACAGTGATGACTACAAGGAAGATAATTGTCAAAATGAAGATCATTTCGATGACTTTCTCGAAGCCAAACCAAATTCACCGCAAGAATGTAAAAATGAAGAATTGGCAGACGATCTTAAAAATGCCGAAAGCGACAAGTCGAACGATTCGTTTTCCAAACGGGACGATGACAAAGGACCGTTctgcgaaaataaaatatctgaatcCGAGAACAGTAAAAGTGATAATACTTGCGTTGTGTGTAAAAAGGAATTGTGTAATAAGCGGTCGTTGAAAAAACATATGAATACGCATCCGGAATATCGGACGAAATGCGTTTTTTGTCCGGTTTGCAGTAAAGTTTTCTTCGACGATTCGAGATTGAAATCGCACATGTCGAGACACGACGGCGACAAGAAATTCAATTGTGATTACTGTGATAAAGAATATTACGAAATGAACGCACTCATAATTCATTTGAAAAGGAAACACACCGTCGAGCCTGTGAAGTGCAAATTGTGTCAGAAAAAGTTTATTTTGCAAGTGCAATTGAACGTGCATATGAAGACTCACAAAGAAAGAAAGTTTATTTGCGAAACGTGCGGAAAGGAGTGTAAAACGCAGACTTTACTCAGCAGTCACAAACTCAGACATACCGAACGAGTACGGATTCCGTGTCCGCAGTGCGATTCGTCGTTTTTGTGCAAATATACGATGCGAAAACACGTGAAAGCTTTTCATCAGGGGTTACAGAGGAAATATATTTGCAGCGTTTGCGGTAAAGAGTCGACGAGCGCGACAAATCTTAAGGTGCATATGCTAAGAATACACGCGGAGCACAGACCGTATAAATGTACGGAGTGTCAGTTATCGTTTGCTTCGGAATCGTTTCTTCACATTCACTCGAAAGTCCACAGCGGGGAATCGTTACCTTATAGAAAACTTTGTACTATTTGCGGAAAGAAATTTCAAAGTTCGACTGGTTTACGCGTTCATATGCGCACACATACAGGGGAGAAGCCGTACGCCTGTTCTATGTGCGAGAAAAGATACAGGACGATATCGGCCCTGTCTAGTCATAAACGAACACATACAGGGGAGAGACCCCATGAATGTCCCATTTGCCACAAACGGTTCTTCACCTCGGCCGTTGTTAAAGAGCATCAACGCACTCACACGGGAGAGAAGCCCTACCGGTGCGAAATTTGTAGTCAAAGTTTCAGTCAGAAATCCACCTTGAGAACGCACAAGAAAATACATTAA
Protein Sequence: MITACTTIKITKCDGLPEYICDKCLKNVTIAYDFKFLSEKSDSLLRKMVENSKVEESNGIKLESEDTCDDSDDYKEDNCQNEDHFDDFLEAKPNSPQECKNEELADDLKNAESDKSNDSFSKRDDDKGPFCENKISESENSKSDNTCVVCKKELCNKRSLKKHMNTHPEYRTKCVFCPVCSKVFFDDSRLKSHMSRHDGDKKFNCDYCDKEYYEMNALIIHLKRKHTVEPVKCKLCQKKFILQVQLNVHMKTHKERKFICETCGKECKTQTLLSSHKLRHTERVRIPCPQCDSSFLCKYTMRKHVKAFHQGLQRKYICSVCGKESTSATNLKVHMLRIHAEHRPYKCTECQLSFASESFLHIHSKVHSGESLPYRKLCTICGKKFQSSTGLRVHMRTHTGEKPYACSMCEKRYRTISALSSHKRTHTGERPHECPICHKRFFTSAVVKEHQRTHTGEKPYRCEICSQSFSQKSTLRTHKKIH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01511312;
90% Identity: iTF_01511312;
80% Identity: -