Basic Information

Insect: Xanthostigma xanthostigma
Gene Symbol: -
Assembly: GCA_963575645.1
Location: OY754465.1:16636771-16640358[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00046 0.0094 16.9 0.5 1 23 155 177 155 177 0.94

2 15 0.025 0.51 11.4 1.7 3 23 185 205 184 205 0.99

3 15 0.00053 0.011 16.7 0.1 1 23 317 339 317 339 0.98

4 15 0.84 17 6.6 0.1 1 23 345 368 345 368 0.96

5 15 0.0056 0.12 13.4 4.3 1 23 395 417 395 417 0.96

6 15 0.46 9.4 7.4 0.0 1 23 430 452 430 452 0.95

7 15 0.024 0.49 11.5 0.7 1 23 458 481 458 481 0.93

8 15 0.19 3.8 8.7 2.1 3 19 490 506 489 507 0.95

9 15 6.7e-05 0.0014 19.5 3.1 1 23 516 538 516 538 0.96

10 15 0.015 0.31 12.1 0.4 2 23 544 565 543 565 0.97

11 15 4.5e-05 0.00092 20.1 0.4 1 23 573 595 573 595 0.98

12 15 0.0036 0.073 14.1 0.2 1 23 601 623 601 623 0.97

13 15 0.00062 0.013 16.5 0.3 1 23 629 651 629 652 0.95

14 15 3.6 73 4.6 0.3 1 23 666 688 666 688 0.95

15 15 9.2e-05 0.0019 19.1 0.4 1 23 1077 1099 1077 1099 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00046	0.0094	16.9	0.5	1	23	155	177	155	177	0.94
2	15	0.025	0.51	11.4	1.7	3	23	185	205	184	205	0.99
3	15	0.00053	0.011	16.7	0.1	1	23	317	339	317	339	0.98
4	15	0.84	17	6.6	0.1	1	23	345	368	345	368	0.96
5	15	0.0056	0.12	13.4	4.3	1	23	395	417	395	417	0.96
6	15	0.46	9.4	7.4	0.0	1	23	430	452	430	452	0.95
7	15	0.024	0.49	11.5	0.7	1	23	458	481	458	481	0.93
8	15	0.19	3.8	8.7	2.1	3	19	490	506	489	507	0.95
9	15	6.7e-05	0.0014	19.5	3.1	1	23	516	538	516	538	0.96
10	15	0.015	0.31	12.1	0.4	2	23	544	565	543	565	0.97
11	15	4.5e-05	0.00092	20.1	0.4	1	23	573	595	573	595	0.98
12	15	0.0036	0.073	14.1	0.2	1	23	601	623	601	623	0.97
13	15	0.00062	0.013	16.5	0.3	1	23	629	651	629	652	0.95
14	15	3.6	73	4.6	0.3	1	23	666	688	666	688	0.95
15	15	9.2e-05	0.0019	19.1	0.4	1	23	1077	1099	1077	1099	0.98

Sequence Information

Coding Sequence: ATGGAAGAGGGCTTTCATTTGAATTGGGACGAAGGTCCTGCAGTTTCACATAGGGAAGAAGTGATTAGCGGGATTGACGGAACACCGAACTCAGAATACGCTGGTGTTTGCGAAGAAGTGGTGGTGCAGGATGTAGCTTCAGAAACTATTGTAACCGATCATATTATACAGGATCATGATCAGACGGCACAAAACATCGTTTATATGCCGTCTGGTGCCGGCAATATTGTTTACATGACACAGAATAATGTAGTCGTTGTACAACAAGAAGATCAAAATATTATCCCGGAACAAGCGTACATGGAATGTCAGGTCACCGAAGAAGTTGTCACCGACGATTGGGTACAGCCTCAGGGTGACGAAAGAGTGGAAATTATAGGCGGTACAGAAGGTGAACAGAATGAAGATGACGTTGAAATTCCATTACCGACAGATCAAGATGAAAATATAACAAGCAGACCGTATCCTTGTGATTTTTGCAGTCGCAGATTCCGGAAAAAGGCAAACTTAATCAATCATTTGGTAGCACATCAAACAGATAGACCTCACGGGTGTAACTTGTGCGGCTCTCGTTATATTCGCAAATGCGATTTAATGAACCATCTAAAAATCCACGCTTATGTACCTGACACGGAGGATTTCGATGACGATGATATGAATTTTCCTTTAGAACCGGAACCGGAGCCTGAAAAACCTTACAAAAAGAAATCATCTAAAAAACACAAGGGAACAAAACTTAAAATCAAAGATGAAATTGAAGACGAAAAATATTCATCCGTACCACGTTCTTATGATTACGTTGACGAAGATATGAGACTGCTTTCAGAAATGGCACAACAAAGTGCCAGTAGAGTGGGTTACGAAAGCATGGATTATTCGGACATGATACCCCCTGAAAATCACCCGGTAAGTGAACCGAGATATCCAATCACAGATCCTCGCAAGCCATTTGTATGCCAGCACTGCGGTGTTGGTTTCGCGAGAGAAAAAGCACTCGCTTCGCACGCGCGGATTCATGGAGGAGACAGTCCCTTTGAATGTGAAACGTGCGGAGACATGTTTTGGGATTTAGCGCTGCTAAGAGAACATGTGCGCAACAAACATAGTGATTTGGCCGGCAACATGTCTTATGACGACGATGAAGATGAAGATTATGTTGAAGACGATGACAAATATGGCGATTTCTTTTGTCAAACATGCGGAATGATTTTCCATAGAAAATATCTATTGAGACGCCATTCAAAAATTCACATCAAAGAAGAGTACGTCAACGAATCTGAGTTCGGGCATGTGTGTAACGTGTGCGGAGATTCGTTTCCGGAAGCTCTCGACTTGTTGGCACACGCAGAAGTACACGCCAGACTAGATGTGCATCGTTGTATGCAGTGTGGAGAAAGCTTCAGCGAGGAACAGCTTTTAGCGAATCATGTGAGCCAACGCCATTCAAAAACTATGCCTGCCAATTCGTGCATGTTATGCGGTAAAACTTGCAAGGATAGAcgtacattgttgaaacactcGTGGGAACATTCGCGTGAGAAAACATTTGCGTGCAGTAAATGTGGTAAAAGTTTCCATAACAAAGCCCGCCTTAAACGACACATGGTTTCCCATCGTAACAAAGCAGTCACTTGCAACGTTTGTGGAGAAGATTTCCCAGATGGAAGATCTTTGATGAATCACAGACATAGCCATAACAATTTAGCAGGTAGGCAGTTTCCTTGTCGTGAGTGCGGTAAAACATTCGGATCGCGCAGTTCGCAGCAGATCCATATTCGAATTCATACGGGGGAACGACCTTATGCTTGCCGATTCTGTTGGAAGGCCTTCGCGGACGGAGGCACCCTTCGTAAACACGAACGCATTCATACGGGTGAAAAGCCCTATGCGTGTGCCGTGTGTCCGCGCGCTTTTAATCAACGCGTCGTTCTACGAGAACACATACGTTCTCATCATTCTGGACCGGATCCAAAATACGGCACCTCCATGACCCCGTATTGCTGCGCGGTGTGTAGCGATTTGTTTGCGACTTCGCAGGATCTTATTCTGCATTTGATTCAGCATTGTGATATGAACACGGCAATGAAACGACAGCCTCAAGTTGGCCCGCGCAAATATAAGCGCCGCCGAAAACTCAAGCCACACGAATTGGAACGCATCTCCAACAGATTAGACGTGGACGATGAGCCCGCGTCTGAATCTGATGACAATAGCAAGAGAAAACTcggaaagaaaaacaaaaaggtCAAATCCGTTTGCGACGACAATTTTGAATCTGTTATGCAAGGATTTGAAAATACGATGAAAAGTATAAATACAATTGTTAATTCACAGAAAAGTACAAGAGGTAGGAAAAAGAAACAGCCGTTGCCAATGAATGATCAGAATTCCATGTCATCTAGGCCGAAAATGATTCATACACAAAAAACCAAAGTGGCCGTTGAAGTCAGTGATGGCAGTAAAGTACGACATAAAACTAAAACATTAATAACCAGGACGACTCCGGCTGTGATGTCAACAAATAATTCGCATCCGGAGCCCGTGAAAGTCGTAAACAACAACGAACGCGAGAGAAATACTGAACGAAATCGACCCCGAACAAAAAATGTCAGTTACCATGTTCTTCAACCAGAAAAATATCAGGTAGCTACTTTTGGTTCTGCAGACAATGTCGAACAAAACTGTATTGATCTATTTGAAGGACAAGACAGGAATATCACAATAAAAAATGAGCCgatcaatataaaaaaagagaatGCAGTGGACTTCAACGAAGATTTGTATTCGGGTGTTGCTAACAATGTTGTGGTTAACGATTGCCCGTCGGTACATTTTGACGTTGCTCAGAATATTGAAATAGGTGAGACTGTGCCGGAAGCCGAAAACGAAGTGTGTGTTGGTGAAGACGATCAAATAGAAGAAGATAAAAATGTTAATGTCAAAGTAGAAGTGTCAAAAGAATCACGTGTTAGACCCGTCGCTTTGAATATTGTcaaagttgtcaaaaaatcaaaTGCACTTAGGCCTTACAATTCTCGACAAATACTAGGTCCAGGAAATAAAATCATACACATTTTGAAAGCTCCTGAAATCGATACTCCTAATGAATCTATTGTACCGGAATCTTTACTTCAGACTCATCAACAGCAGTCAGTAAAAATGGAACCGATAGATGCCACTTCGTTGCACGAACTAGCTGAACTTTCAATGCAGCATGCACAAAACAAGTTTAAATGTGAGATGTGCAGTGAAACGTTTTCTGATCGGGGACAGCTGTTGttacatgttaaaatccatatCTAA
Protein Sequence: MEEGFHLNWDEGPAVSHREEVISGIDGTPNSEYAGVCEEVVVQDVASETIVTDHIIQDHDQTAQNIVYMPSGAGNIVYMTQNNVVVVQQEDQNIIPEQAYMECQVTEEVVTDDWVQPQGDERVEIIGGTEGEQNEDDVEIPLPTDQDENITSRPYPCDFCSRRFRKKANLINHLVAHQTDRPHGCNLCGSRYIRKCDLMNHLKIHAYVPDTEDFDDDDMNFPLEPEPEPEKPYKKKSSKKHKGTKLKIKDEIEDEKYSSVPRSYDYVDEDMRLLSEMAQQSASRVGYESMDYSDMIPPENHPVSEPRYPITDPRKPFVCQHCGVGFAREKALASHARIHGGDSPFECETCGDMFWDLALLREHVRNKHSDLAGNMSYDDDEDEDYVEDDDKYGDFFCQTCGMIFHRKYLLRRHSKIHIKEEYVNESEFGHVCNVCGDSFPEALDLLAHAEVHARLDVHRCMQCGESFSEEQLLANHVSQRHSKTMPANSCMLCGKTCKDRRTLLKHSWEHSREKTFACSKCGKSFHNKARLKRHMVSHRNKAVTCNVCGEDFPDGRSLMNHRHSHNNLAGRQFPCRECGKTFGSRSSQQIHIRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDPKYGTSMTPYCCAVCSDLFATSQDLILHLIQHCDMNTAMKRQPQVGPRKYKRRRKLKPHELERISNRLDVDDEPASESDDNSKRKLGKKNKKVKSVCDDNFESVMQGFENTMKSINTIVNSQKSTRGRKKKQPLPMNDQNSMSSRPKMIHTQKTKVAVEVSDGSKVRHKTKTLITRTTPAVMSTNNSHPEPVKVVNNNERERNTERNRPRTKNVSYHVLQPEKYQVATFGSADNVEQNCIDLFEGQDRNITIKNEPINIKKENAVDFNEDLYSGVANNVVVNDCPSVHFDVAQNIEIGETVPEAENEVCVGEDDQIEEDKNVNVKVEVSKESRVRPVALNIVKVVKKSNALRPYNSRQILGPGNKIIHILKAPEIDTPNESIVPESLLQTHQQQSVKMEPIDATSLHELAELSMQHAQNKFKCEMCSETFSDRGQLLLHVKIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01511281;
90% Identity: iTF_01511281;
80% Identity: -