Xxan020246.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xanthostigma xanthostigma
Gene Symbol
-
Assembly
GCA_963575645.1
Location
OY754474.1:3023956-3033248[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.00036 0.0074 17.2 2.0 1 23 636 658 636 658 0.98
2 17 0.02 0.41 11.7 5.3 1 23 664 686 664 686 0.98
3 17 0.0018 0.037 15.0 6.0 1 23 692 714 692 714 0.99
4 17 0.0047 0.097 13.7 0.9 1 23 720 742 720 742 0.98
5 17 0.02 0.42 11.7 5.0 1 23 748 770 748 770 0.97
6 17 0.0042 0.087 13.8 3.4 1 23 776 798 776 798 0.94
7 17 0.0022 0.045 14.7 0.4 1 21 804 824 804 825 0.94
8 17 6.1 1.2e+02 3.9 5.5 1 23 1038 1060 1038 1060 0.91
9 17 0.00076 0.016 16.2 4.0 1 23 1066 1089 1066 1089 0.95
10 17 0.0096 0.2 12.7 4.5 2 23 1094 1115 1094 1115 0.97
11 17 0.00053 0.011 16.7 1.7 3 23 1123 1143 1121 1143 0.95
12 17 0.0014 0.03 15.3 3.0 1 23 1149 1171 1149 1171 0.98
13 17 4.3e-05 0.00089 20.1 1.9 1 23 1177 1199 1177 1199 0.98
14 17 0.0098 0.2 12.7 5.5 1 23 1205 1227 1205 1227 0.97
15 17 0.00094 0.019 15.9 1.6 1 23 1233 1255 1233 1255 0.97
16 17 0.0002 0.0042 18.0 2.6 1 23 1261 1283 1261 1283 0.98
17 17 0.0024 0.05 14.6 5.0 1 23 1289 1311 1289 1311 0.96

Sequence Information

Coding Sequence
ATGATGTCTAAGTTTTATAAATGTTGTGCGGTGCCTCAGTGTGCAAGTAATACAAGCAAAACTCCTGAAAAGCTGTTTATTCACGTTCCACGTTCAAAAGACAGGAAAATTTGGCTTCAACTTGCCCGCAGGGATCCGGCACTTGTAGCTACACaatctaaaatgtatttttgtgaaGATCATTTTGACttacCGACTGATATGGAAAACTATACCGAATATCATTTAATGGGTTCGGTATCTCAAGTCCGAATAAGAGCAGGTTGTTTGCCAAAAAAATTTGGGTGTCAACCTGACAGAAAAAGACGAACAGATAAAAAAACAGCTCGATCATTAGTAATCAAAAGGCAAAGATTAGAAGCAATATCGGAATGTGAAAGAGAAATCGAAGCACGCTCTACACAAAGTATTTCCATGGTTGAAGTTCAACCAGGTCCAAGCTCAGatATCTACGAAACCCGAAAAATGGAACAATTGTGCAGGTTATGTTTGTCATACTTACACGATTTGACTACGACTgctgtatttttgttttcttccgAATCGGGCGAAGAAATAGCGGATATAGTAATGGAATGTGCACCAGTTCAAATTACTAGATACGATAAGATGCCGACCTATATTTGTCTATTATGTTTCGCTGAACTGAAGAAATTTCACCAGTTCCAAATGCAAGTAATACAGTCGGACAAAACATTGCAGCGCCATGTGCAGCAGTTGGCCGATTGTTCTACGCAGATCAAGGTTGAAAGGGACCATGAAGAAGGACCATCCGATAATTCCGTTAGTCAGAACACTGAAACCGATGTCACTACACGATGCGAAGCATTTGAAATAAGTCCTGAGtttgatttttattcaaaacagaCACCACCTGtcaattttaacgcagaaaataGCAATAACGAAGAGATgcttttaaaaactgaaattaaaGATGAACCAATTGATtataattcatttgtttcatcaGAGTCTGCTGAAGAACCAGTTGCAAGTTTATCCAAGGTTGAAGATAGTGAAATCAATTGCGAAGATTCTATGATTACTATAGGTGATACTAAAGTAGATGTAAAGAAGACAGAATTCTTTGAGTATTCctttaaaattgaaaacgaCACGGCGGAGGAAATACCGCTTAAATTGGAAGAAGCAACCAATAAACCACTAGAACAAGTCGATAGTAGCCTAGTTCCCCAAAATTTTAGAACGGATCCATCTGTTGGTATAGGAGAGAAGCAGTACGAATGCGatATTACTAGATACGATAAGATGCCGGCCTATATTTGTCGATTATGTTTCGCTGAACTGAAGAAATTTCACCAGTTCCAAATGCAAGTAATACAGTCGGACAAAACATTGCAGCGCCGTGTGCAGCAGTTGGCCGCTTGTCCTACGCAGATCAAAATTGAAAGGGACCTTGAAGAAGAACCATCTGATAATTTCGTTAGCCAGAACACTGAAACCGATGTCACTACACGATGTGAACCATTTGAAATAAGTCCTGTGtttgatttttattcaaaacagaCGCCACCTGtcaattttaacgcagaaaataGCAATAACGAAGAGATACCTTTAAAAACTGAAATCAAAGAAGAACCGTTGGACTATAATTCACAAATTCCAACAGTGTGTGCTGAGGAGACAGTAGGAAGTTTATCCAAGGTTGAAGATGGTGAAATCAATTGCGAAGATTCTATGATTACCACAAGCGATATTAAAGTAAATGTAAATAAGTCAGAATTCTATGCGTATtcctttaaaattgaaaatgacaCGGCGGAGGAAATACCGAtgaaattggaagaaacgtccAATAAACAACTAGAAGAAGTCGATGGTAGCCTAGTTCCCCAAAATTTAAGAATGGATCCATCTATTGATGGAGAAGAGAAACCGTACAAGTGTGGTGATTGTAAAATGCGTTTCAAACAAGCGGTTTATTTAAAGCGTCATTCATTGAAACATACTGGGGAGAAACcacatcagtgtgacatttgtaaaatgcgTTTTAGACACATAAGGACATTAAAGAACCATGAAttaacacatacaggagagaaaccatatcagtgtgatatttgtcaGATGTGTTTCAGGCAAACgattcacttaaaaaatcataaactaACACATTCTGGAGAGAAACCCTACCAGTGTGATATTTGTCAAATGTCTTTCAGAGAAGCGAGAGTTTTAAAGAGTCATAAATTAAAGCATTCAGGAGAGAAACcgcaccagtgtgacatttgtcagtTGCGTTTTAGACAAACGATtcacttaaaaattcataaactaaaacatacaggtgagaaaccataccagtgtgacatttgcaaAATGCGCTTTAGGCACTCAACTACTTTAAGGATACATGAATTCCagcatacaggagagaaaccataccagtgtgacgtttgtcaaATGGGTTTCAGACAAGCgattcacttaaaaaatcataaaATTACTAGATACGACAATATGCCGGCCTATATTTGTCGATCTTGTTTCGCTGAACTGAAGAAGTTTCACCAGTTCCAAATGCAAGTAATACAGTCGGACAAAACATTGCAGCGCCGTGTGCAGCAGTTGGCCGATTGTCCTACGCAGATCAAGGTTGAAAGGGACGTGGAAGAAGAACCATCTGATGATTCCAAAAGCCAGAACACCAAAACCGATGTTACTACGCGATGTGAACCATTTGAAGttagtaatttttattcaagAGAGACGCCGCCTGTCAATTATAACGCAGAAAATAGTAATTGCGAAGAGATACCTTTAAAAACTGAAATCAAAGAAGAACCGTTGGACTATAATTCACAAATTCCAACAGTGTCTGCTGAGGAGACAGTAGGAAGTTTATCCAAAGTTGAAGATAGTGAAATCAATTGCGAAGATTCTATGATTACCACAGGCGATACTAAATTGGATATAAATAGGACCGAAATCTTTGAGCATTtctttaaaactgaaaatgGCATGGCGGAGGAAATACCGCTTAAATTGGAAGAAACATGCATAAAACCGTTAGAGGAAGCTGATAGTGGCCTATTTCCCGAGAATTTAAGAATGGATCCATCTATTGATACAGAAGACAAACCGTACAAGTGTGACATTTGCCAAATGTGTTTCAGAGAAGCGAGAGTTTTAAAGTGTCATAAACTAaagcatacaggagagaaaccgcaccagtgtgacatttgtaaaatgtgtttcaaacaaccgatttatttaaaacgtcatttattattaaatcacaCAGAAGAGAgacagtgtgacatttgtaaaatgtgtttcacaAACACAACTTCTTTAAATAATCATAAACTAagacatacaggagagaaaccacacctgtgtaaaatttgtaaaatcagTTTTACAGACCCAACAACTTTAAGGAATCATATATCacaacatacaggagagaaaccgtacatGTGTGACAGTTGTCCGCAACGTTTCAAACAATTGGGTCACTTAAAAACCCATAGATTAAGACATGCAGTAGAAAAACAATACCAGTGTGgtatttgtcaaatgtgtttcaaaCAAGCGGGCCAGCTAAAACgtcataaattaatacatacaaaaatgaaacgacatcaatgtgacatttgtcaaatgtgttacAAAGACTCGCGTACTTTAAACAAACACAAATCAATTCACACGGGGGAGAAGCCCTACCAATGCGAGGTTTGTAAAACGTGTTTTAGACAAGTAGCTACTTTAAGGAACCACGAATTAATACATAAAgatgagaaaccgtaccagtgtgatgtTTGTCAAATGTCGTTCAGGCAAGCGAGACACTTGAAAAGTCATGAgttaaaacatacaggagagaaaccctACCAGTGTAAGATATGTAAAATGTCTTTTAGACATTCGAATTCTTTAAAATTACACGAATTTAAGCATACAATGGACACCGAGTGA
Protein Sequence
MMSKFYKCCAVPQCASNTSKTPEKLFIHVPRSKDRKIWLQLARRDPALVATQSKMYFCEDHFDLPTDMENYTEYHLMGSVSQVRIRAGCLPKKFGCQPDRKRRTDKKTARSLVIKRQRLEAISECEREIEARSTQSISMVEVQPGPSSDIYETRKMEQLCRLCLSYLHDLTTTAVFLFSSESGEEIADIVMECAPVQITRYDKMPTYICLLCFAELKKFHQFQMQVIQSDKTLQRHVQQLADCSTQIKVERDHEEGPSDNSVSQNTETDVTTRCEAFEISPEFDFYSKQTPPVNFNAENSNNEEMLLKTEIKDEPIDYNSFVSSESAEEPVASLSKVEDSEINCEDSMITIGDTKVDVKKTEFFEYSFKIENDTAEEIPLKLEEATNKPLEQVDSSLVPQNFRTDPSVGIGEKQYECDITRYDKMPAYICRLCFAELKKFHQFQMQVIQSDKTLQRRVQQLAACPTQIKIERDLEEEPSDNFVSQNTETDVTTRCEPFEISPVFDFYSKQTPPVNFNAENSNNEEIPLKTEIKEEPLDYNSQIPTVCAEETVGSLSKVEDGEINCEDSMITTSDIKVNVNKSEFYAYSFKIENDTAEEIPMKLEETSNKQLEEVDGSLVPQNLRMDPSIDGEEKPYKCGDCKMRFKQAVYLKRHSLKHTGEKPHQCDICKMRFRHIRTLKNHELTHTGEKPYQCDICQMCFRQTIHLKNHKLTHSGEKPYQCDICQMSFREARVLKSHKLKHSGEKPHQCDICQLRFRQTIHLKIHKLKHTGEKPYQCDICKMRFRHSTTLRIHEFQHTGEKPYQCDVCQMGFRQAIHLKNHKITRYDNMPAYICRSCFAELKKFHQFQMQVIQSDKTLQRRVQQLADCPTQIKVERDVEEEPSDDSKSQNTKTDVTTRCEPFEVSNFYSRETPPVNYNAENSNCEEIPLKTEIKEEPLDYNSQIPTVSAEETVGSLSKVEDSEINCEDSMITTGDTKLDINRTEIFEHFFKTENGMAEEIPLKLEETCIKPLEEADSGLFPENLRMDPSIDTEDKPYKCDICQMCFREARVLKCHKLKHTGEKPHQCDICKMCFKQPIYLKRHLLLNHTEERQCDICKMCFTNTTSLNNHKLRHTGEKPHLCKICKISFTDPTTLRNHISQHTGEKPYMCDSCPQRFKQLGHLKTHRLRHAVEKQYQCGICQMCFKQAGQLKRHKLIHTKMKRHQCDICQMCYKDSRTLNKHKSIHTGEKPYQCEVCKTCFRQVATLRNHELIHKDEKPYQCDVCQMSFRQARHLKSHELKHTGEKPYQCKICKMSFRHSNSLKLHEFKHTMDTE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01531618;
90% Identity
iTF_01531618;
80% Identity
iTF_01531618;