Basic Information

Insect: Xanthostigma xanthostigma
Gene Symbol: -
Assembly: GCA_963575645.1
Location: OY754468.1:42171251-42174866[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.84 17 6.6 0.4 3 23 118 139 116 139 0.93

2 16 0.033 0.67 11.0 0.3 3 23 148 167 146 167 0.95

3 16 5.2e-05 0.0011 19.8 3.2 1 23 173 195 173 195 0.97

4 16 5.1e-06 0.0001 23.0 0.4 1 23 201 223 201 223 0.98

5 16 0.0018 0.036 15.0 0.9 1 23 356 379 356 379 0.96

6 16 0.58 12 7.1 0.2 3 23 388 407 387 407 0.96

7 16 7.4e-07 1.5e-05 25.7 1.0 1 23 413 435 413 435 0.98

8 16 6.3e-06 0.00013 22.7 1.3 1 23 441 463 441 463 0.98

9 16 0.0001 0.0021 18.9 3.9 1 23 469 491 469 491 0.98

10 16 0.2 4 8.6 0.5 1 23 523 545 523 545 0.97

11 16 3.8e-05 0.00078 20.3 0.2 1 23 550 572 550 572 0.95

12 16 0.00036 0.0073 17.2 0.1 1 23 578 600 578 600 0.94

13 16 0.00011 0.0022 18.9 2.5 1 23 606 628 606 628 0.95

14 16 1.4e-05 0.00029 21.6 7.0 1 23 634 656 634 656 0.98

15 16 8.4e-06 0.00017 22.3 0.2 1 23 662 684 662 684 0.99

16 16 4.9e-05 0.001 19.9 1.4 1 23 690 712 690 712 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.84	17	6.6	0.4	3	23	118	139	116	139	0.93
2	16	0.033	0.67	11.0	0.3	3	23	148	167	146	167	0.95
3	16	5.2e-05	0.0011	19.8	3.2	1	23	173	195	173	195	0.97
4	16	5.1e-06	0.0001	23.0	0.4	1	23	201	223	201	223	0.98
5	16	0.0018	0.036	15.0	0.9	1	23	356	379	356	379	0.96
6	16	0.58	12	7.1	0.2	3	23	388	407	387	407	0.96
7	16	7.4e-07	1.5e-05	25.7	1.0	1	23	413	435	413	435	0.98
8	16	6.3e-06	0.00013	22.7	1.3	1	23	441	463	441	463	0.98
9	16	0.0001	0.0021	18.9	3.9	1	23	469	491	469	491	0.98
10	16	0.2	4	8.6	0.5	1	23	523	545	523	545	0.97
11	16	3.8e-05	0.00078	20.3	0.2	1	23	550	572	550	572	0.95
12	16	0.00036	0.0073	17.2	0.1	1	23	578	600	578	600	0.94
13	16	0.00011	0.0022	18.9	2.5	1	23	606	628	606	628	0.95
14	16	1.4e-05	0.00029	21.6	7.0	1	23	634	656	634	656	0.98
15	16	8.4e-06	0.00017	22.3	0.2	1	23	662	684	662	684	0.99
16	16	4.9e-05	0.001	19.9	1.4	1	23	690	712	690	712	0.95

Sequence Information

Coding Sequence: ATGATAACAGCTTGTGCTTGTGTACAGATATTTGAAGGGGACGGCCTTCCACCTCAAGTTTGTTCTAACTGTTTTGATCGCCTACTTCAAGCATATATATTTAAGCAACAATGTGAAAAAGCAGATCTCACTCTTCGTGATTACAAATACAAAACTATCACGAATTATTCACATTTTCTAGAAGATACTTCATCAGCCTTTTATTCAAGTGACGAAAACTTGAAACTATTTAAAGAAGATTCTGAAATGCATTACCAAAACAGTAAAGATCCAGACGAACTTAATAAAGAACAATACGAAAAAACCGATCTTAAACCTAAAAAGTCcggaaaaaataacaaaacaattatttgtAAAGAATGCGGAGAtatgtttgaaaataataaaattctaaaagagCACAGAAAAGAAAAACATCCCCGTATTACGAAAGATCAAATTTGCTCGATATGCTCAAAATCATTTAATGTATGGAAAATGGCGATTCACATGCGTAGTCATACTCAAGAAAAGCCATTTGCCTGTAATATATGTGGAAACAAGTTTAACGTCAAGTGTAATTTAAAACGTCATATGATGCGTCATACTGGAGAGCGACCTCATAAATGTCCGGTCTGTGACAAGGGTTTCATTCAGGCTTCTTCGTTAAGTGAACATTTGAAAGTTCACAATGAAGAAGCACCATTCCAGTGTACGATCAGTTCAAAGAGTTTTACGCAATCAGATCAACTTTGTGCacggATATACGAAGGAGACGGTTTTCCATCACAGTTGTGTTCAAATTGTTTTAATCAAGTGCTTCAATCTTATGCATTTAGGCGGCAATGCGAAAAAGCAGATGTTACTCTTCATAACCATGCATATAAAAATCTCAGCAATAATTCACTTGCTTTAGAAGATGCTGAGCCAGCTTTACATTCAGACGAtgaaaactcaataacaattaaAGAGGAAATATGCGAAGAAAAGATCGTCAAAAAAGAATCAGAAAAGTGTTCCAAGAatcttaagaataaaaaaactaataaatacaaTAAGACTGAAAATACTGTCGATAAATCATCttttacatgtaaaaaatgcGGTAACATATTCCAAAGTAATGTACTTTTAAGAGAtcatataaaagaaaaacaCCCATACAAAGGAAGAGAGAAAATTTGTACGATTTGCTCAAAATCCGTTAACGTATGGAGATTATCAATTCATATGCGTAGTCATACTCAAGAAAAGCCATTTACATGTCATATTTGTGGTGTCATGTTTAGTGTTAAAGGAAATTTAACGCGACATATGATGCTACATACTGGAGAGCGACCTCACAAATGTCCGATCTGTAATAAAGGCTTTATTCAGTCTTTTACTTTAACTGAACATTTAAGAGTTCATACTCGTGAAACCCCATTCCATTGCACTCTCTGTTCCAAAAGTTTTACTCAATCGGGTCAGTTACGTTTGCACGTAAAAAGACACAGCGAACCGGATAATGATCATGTGGTACACAGACCAAGACAGACTCACGGTGAACGTACTCGAAGATCTGATATTGCCCCGGAAGAAAGGAAACACGTTTGCTCCATTTGTCAGCGCGGATATTTATCGGAATTAGCACTCAAAACTCACCTAAGAATACATAGTGATAAAAAGTTTCTTTGCAGTGAATGCGGTAAAGGATTTGTTAGTCGTTCCAATTTAGTCATACATTCAAAAGTTCACACAGGAGAAAAATCGCATCGCTGTGCTGACTGTGGTAAATCATATACACAAATTGGTGCGCTGAAAGCGCATGCCGTAATTCATTCAGGGAtaaaaccgtaccagtgtacTATTTGTAATAGATCGTTTACTCATGCAATGTCTCTCAAAACACATTCATTATTACATACGGGGGAAAAGCCATTTTCATGTTCTTTGTGCGAAAAAGTTTTCACACAGAGACATCATTTGAAGTATCACATGAGAACACATtcaggagagaaaccatatgTGTGCAGTTATTGTGGTAAAGGATTTGCTCTCAAAGGAAATATGACTGTTCATGTAAGAACTCATACAGGTGAAACTCCTTATCTCTGTCCGGTGTGTGGAAAGGGATTTTATGATTCTAGCAGTATGAAAAAACATCATAAAGGGCATGGAAATAAAACAGTTGCAGGAAAAAACAACGAAACCGTTCTACATGATTAA
Protein Sequence: MITACACVQIFEGDGLPPQVCSNCFDRLLQAYIFKQQCEKADLTLRDYKYKTITNYSHFLEDTSSAFYSSDENLKLFKEDSEMHYQNSKDPDELNKEQYEKTDLKPKKSGKNNKTIICKECGDMFENNKILKEHRKEKHPRITKDQICSICSKSFNVWKMAIHMRSHTQEKPFACNICGNKFNVKCNLKRHMMRHTGERPHKCPVCDKGFIQASSLSEHLKVHNEEAPFQCTISSKSFTQSDQLCARIYEGDGFPSQLCSNCFNQVLQSYAFRRQCEKADVTLHNHAYKNLSNNSLALEDAEPALHSDDENSITIKEEICEEKIVKKESEKCSKNLKNKKTNKYNKTENTVDKSSFTCKKCGNIFQSNVLLRDHIKEKHPYKGREKICTICSKSVNVWRLSIHMRSHTQEKPFTCHICGVMFSVKGNLTRHMMLHTGERPHKCPICNKGFIQSFTLTEHLRVHTRETPFHCTLCSKSFTQSGQLRLHVKRHSEPDNDHVVHRPRQTHGERTRRSDIAPEERKHVCSICQRGYLSELALKTHLRIHSDKKFLCSECGKGFVSRSNLVIHSKVHTGEKSHRCADCGKSYTQIGALKAHAVIHSGIKPYQCTICNRSFTHAMSLKTHSLLHTGEKPFSCSLCEKVFTQRHHLKYHMRTHSGEKPYVCSYCGKGFALKGNMTVHVRTHTGETPYLCPVCGKGFYDSSSMKKHHKGHGNKTVAGKNNETVLHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01531617;
90% Identity: iTF_01531617;
80% Identity: iTF_01531617;