Xxan021904.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xanthostigma xanthostigma
Gene Symbol
-
Assembly
GCA_963575645.1
Location
OY754475.1:1028918-1032184[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 32 0.38 7.8 7.7 3.4 1 20 49 68 49 69 0.94
2 32 2.6e-06 5.3e-05 23.9 2.7 1 23 93 115 93 115 0.99
3 32 0.00018 0.0037 18.1 4.1 1 23 121 143 121 143 0.98
4 32 0.0031 0.063 14.3 1.6 1 23 149 171 149 171 0.99
5 32 0.00015 0.0031 18.4 3.2 1 23 177 199 177 199 0.98
6 32 0.0021 0.042 14.8 6.8 1 20 205 224 205 226 0.95
7 32 0.00041 0.0083 17.0 2.1 1 23 249 271 249 271 0.98
8 32 1.8e-05 0.00036 21.3 2.0 1 23 277 299 277 299 0.99
9 32 0.00059 0.012 16.5 4.5 1 23 303 325 303 325 0.96
10 32 0.0001 0.0021 18.9 0.2 1 23 331 353 331 353 0.98
11 32 6.2e-06 0.00013 22.8 2.6 1 23 359 381 359 381 0.98
12 32 2.2e-05 0.00045 21.0 3.3 3 23 389 409 387 409 0.98
13 32 0.065 1.3 10.1 4.5 1 23 415 437 415 438 0.95
14 32 0.012 0.25 12.4 1.1 1 21 444 464 444 466 0.95
15 32 7.5e-05 0.0015 19.3 4.4 1 23 556 578 556 578 0.97
16 32 1.2 26 6.1 4.6 1 21 584 604 584 606 0.90
17 32 0.00011 0.0022 18.9 0.8 1 23 612 634 612 634 0.98
18 32 0.0044 0.089 13.8 4.3 1 20 640 659 640 662 0.95
19 32 4.6e-05 0.00095 20.0 5.5 1 23 668 690 668 690 0.99
20 32 5.3e-05 0.0011 19.8 2.0 1 23 711 733 711 733 0.98
21 32 0.36 7.3 7.8 3.6 1 23 739 761 739 761 0.87
22 32 0.0035 0.071 14.1 3.0 1 21 767 787 767 789 0.95
23 32 9e-05 0.0019 19.1 2.7 1 23 795 817 795 817 0.98
24 32 0.00022 0.0044 17.9 5.7 1 20 827 846 827 849 0.95
25 32 3.6e-05 0.00074 20.4 3.0 1 23 855 877 855 877 0.99
26 32 7.1e-05 0.0014 19.4 6.9 1 23 883 905 883 905 0.99
27 32 2.6e-05 0.00053 20.8 0.6 1 23 911 933 911 933 0.96
28 32 0.00091 0.019 15.9 4.7 1 21 939 959 939 961 0.92
29 32 4.5e-06 9.2e-05 23.2 1.2 1 23 967 989 967 989 0.99
30 32 0.00019 0.0039 18.1 3.5 1 23 995 1017 995 1017 0.98
31 32 3.9e-05 0.0008 20.2 6.0 1 23 1023 1045 1023 1045 0.99
32 32 0.0012 0.025 15.5 2.9 1 23 1051 1073 1051 1073 0.97

Sequence Information

Coding Sequence
ATGGATGCAACAATAACAGAACATGTTACGGAAGAAAACAAAATAGATGCTAACGGACACGCTAATATGAACGATCTCGgtgtaaaattagaaattagTTTAGACGAAACATTGGCGAATTTATACGAAACTGCGTGCAACGATTTCAAATGCAAAGACTGCCAACAGTACTTCGGTGACAAAAGCAGTTTCGGAGCTCACAAATGCCCTCAAGCGACCGAAAAATCTGAACAGTCTAACGACGAACCTAAAAAGAACGCCGTGCAGAAATTAAACTACCAATGCGACATTTGCGGTAAATGTTTCAAGGCTCCCAGTAAATTAACGTCGCATTATCGGTCGCATACCGGGGAACGACCGTACCAGTGCGACGTATGCAGCAAAAGATTTTCACAGAACTGCGACTTGATTCGACACAGTAAACGACACGTGAGCGACAAACCGTACCGGTGCGACATTTGTATCAGATACTTCAACACCGCCGACGGTTTAAAAATTCATCACCGTACCCACACCGGCCAGCAGCGCTATCAGTGCGACATCTGCGATAAACGCTTCAGCTACTGCGGCAGTTTGAAAGGCCACAAACGCCTGCATACGGGCGAGAAGCCTTACAGGTGCGAAAAGTGTTACAAGTGCTTCACACAAAAGAGTACGTTAAACACGCATCGATGCGGCGATGCGCCCCGGGTGCGTAAAAAACCGGCGCCCGGCACGATCAAGAAACGAACCGAACAGAAGCCCTACTTCTGCGAGATCTGTTTCAAATGTTTCAGCGCTCCGAGTAAATTGGCCGCGCATAAAAGATCGCATACGGGCGAACGGCCGTTCCAGTGCGACGTCTGCGATAAAGGTTTTATACAGAACTGCGATTTGAACCGACATAAAAGGATTCATAAGAAGCCGCACAAATGCGACGAGTGTGATCGAAGCTTTATGCAAAAGAGCGATTTAGTTAAGCATAAAGAACATCACACCATGAAAGTTCCTTACAAGTGTGACAtttgcaataaatattattcgtCTTTGGCTAGCCTACAAGCGCACGCCCAAGTTCATGGTGAAAAGAAACGTTTTCAGTGCGACGTGTGTAAGAAACGCTTCACGTTTTCGAGTAATTTGACGGCCCACAAACGCCTACATTACGGGGAGAAGCCGTACGGGTGTAAAATCTGCGACAAACGCTTCGCGCATAAAAACAACTTGAAAATTCATAGACGTTCCCACGTTAAAGATAAACAGTATCGGTGTAACGTTTGCGACAAGGCTTTttctaaaatgaaaatattcaagaTGCACAAACGCAGTCATCACGTCAACGAAAAGAGTTTTAAGTGCGAAGTGTGCTCCGAAACGTTTGCGGTTTCGAGCGAGCTCGATGCGCATAAACGGTGCCACGACGGTAAAGACAAAGAATGCAAGAACGAAGTGTTTATCAAAGAAGAGGACAGCTACGACGACGATTTTGCGTATTCCGTGTTCGATACGGCTGAAATATTGGACGACGATAATTTGGAATTTAAAACCGATTCGCAAGAAGTGATGGAGATCAAACAAGAGAATATCGTGAATGAAATTACTCAGACGTTACTTCAAAGTGCCGTTAAAACGGAGTACGGTACAAAAGTGTTgaagattaaattaaaaaagccTTCGGACAAGCCGTTCCAGTGCGACGTGTGCAGCAAATGTTTTAGTTATGCAAGCAGTttgaaaaaacacaaattaaacCACACGGGAGAAAAAACATTTCAGTGCGAACTGTGCGATAAAAGTTTCTTCCAGTTGCAAATTTATAAATCGCACCAACGTTGTCACACAggggagaaaccttatcagtgtgatatTTGCAGTAAAAGTTTCAGTCAGATGGGCGGATTGATATCCCATAAACGTTTCCAtaccggagagaaaccgtatcagtgcgaAATTTGCGAGAAACGTTTTGCTCATATAAGCAATTTATACAAACACAAACTTTGTCACGACGACGTGAAGCATTACCAGTGTGAAATATGTGCGAAATGTTTCAAGCACTCGTCGAGTTTAAATTCTCATCGGCTGACCCACCCGTCCGTTAAGCAGAGTATAGCCGAACCGATCGACGACGCGCCGTTATCCGAAAAGACGCATCAGTGCGAAATATGTAAAAAGTTCTATTCGACTCCGGCCGTCTTAAAGACTCACATGCAGACGCACAGCGACGAGAAGCCGTATCGCTGCGACTTGTGTCCAAAGAGTTTCTCGCAGCTCCGCATCTTCCGATGCCACCAACGTCTTCATACTGGAGAGAAGCcctatcagtgtgacgtttgcagcaAGAGGTTCAGTCAAATGAGCGGTTTGATTTCGCACAAACGCTGTCATacgggtgagaaaccgtaccagtgtgaagTTTGCGAGAAGAGTTTCGCGCACATCAGCAACTTGTATAGGCACAAACAGTACCACGTCGAGAAAGAGTGCGACGACAGACCGTATAAATGCGACGATTGCGGCAAGTGTTTTGCCAACAAAGAATACTTGCAGTCGCACCGATTGTGTCACACGACCAATAAACCGTACCAGTGCGACGTCTGCGGCAAAAGTTTTCATCGAATGAGCAAACTCATGTCGCATAAACGCGTTCATACGGGCGAGAAACCGTACAAGTGCGACAGCTGCGAGAAATGTTTTTCGCATTCGTCGTCGTTGAAAGCTCACAAACGgtcacataccggtgagaagccTTACCTGTGCAACATTTGCAGCAAAAGTTTTACTCGCGTCGAAAGTTTGCGAGCGCACGAACGGATGCACAGCGGTAAGAAACCGTTCTTGTGCGACGTGTGCTACAAACGGTTCAGCAGTTCGTCGAACTTAAAAACTCATCAGCGCTGTCACACGGGCGAGAAGCCGTTCCAGTGCGACGTTTGCGACAAACAGTTCTCGCAAAAGAACGCGCTTATCTCGCATAAACGCAcgcatactggagagaaaccttTCCATTGCGACGTTTGCGATAAAAATTTTTCGCAGTTGACTTCGCTGAAGGAGCATAAACGgtcacataccggtgagaagccGTTCCAGTGTGAAGTTTGCAATAAGTGCTTCTCTCAGTCAAGCTATTTCAAGGAACACAAACGCTCACATACAGGGGAGAAACCGCATATGTGTAACATTTGTTATAAGCCGTTCAATTATTTGAGTGCATTGTATACACATAAACGCACGCATAAGAAAAATCTGATAAACGTAATTGAAAAGTTTGACGGTGTTCAGTAA
Protein Sequence
MDATITEHVTEENKIDANGHANMNDLGVKLEISLDETLANLYETACNDFKCKDCQQYFGDKSSFGAHKCPQATEKSEQSNDEPKKNAVQKLNYQCDICGKCFKAPSKLTSHYRSHTGERPYQCDVCSKRFSQNCDLIRHSKRHVSDKPYRCDICIRYFNTADGLKIHHRTHTGQQRYQCDICDKRFSYCGSLKGHKRLHTGEKPYRCEKCYKCFTQKSTLNTHRCGDAPRVRKKPAPGTIKKRTEQKPYFCEICFKCFSAPSKLAAHKRSHTGERPFQCDVCDKGFIQNCDLNRHKRIHKKPHKCDECDRSFMQKSDLVKHKEHHTMKVPYKCDICNKYYSSLASLQAHAQVHGEKKRFQCDVCKKRFTFSSNLTAHKRLHYGEKPYGCKICDKRFAHKNNLKIHRRSHVKDKQYRCNVCDKAFSKMKIFKMHKRSHHVNEKSFKCEVCSETFAVSSELDAHKRCHDGKDKECKNEVFIKEEDSYDDDFAYSVFDTAEILDDDNLEFKTDSQEVMEIKQENIVNEITQTLLQSAVKTEYGTKVLKIKLKKPSDKPFQCDVCSKCFSYASSLKKHKLNHTGEKTFQCELCDKSFFQLQIYKSHQRCHTGEKPYQCDICSKSFSQMGGLISHKRFHTGEKPYQCEICEKRFAHISNLYKHKLCHDDVKHYQCEICAKCFKHSSSLNSHRLTHPSVKQSIAEPIDDAPLSEKTHQCEICKKFYSTPAVLKTHMQTHSDEKPYRCDLCPKSFSQLRIFRCHQRLHTGEKPYQCDVCSKRFSQMSGLISHKRCHTGEKPYQCEVCEKSFAHISNLYRHKQYHVEKECDDRPYKCDDCGKCFANKEYLQSHRLCHTTNKPYQCDVCGKSFHRMSKLMSHKRVHTGEKPYKCDSCEKCFSHSSSLKAHKRSHTGEKPYLCNICSKSFTRVESLRAHERMHSGKKPFLCDVCYKRFSSSSNLKTHQRCHTGEKPFQCDVCDKQFSQKNALISHKRTHTGEKPFHCDVCDKNFSQLTSLKEHKRSHTGEKPFQCEVCNKCFSQSSYFKEHKRSHTGEKPHMCNICYKPFNYLSALYTHKRTHKKNLINVIEKFDGVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01530486;
90% Identity
iTF_01510993;
80% Identity
-