Xxan011016.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xanthostigma xanthostigma
Gene Symbol
-
Assembly
GCA_963575645.1
Location
OY754469.1:9762327-9770153[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 39 0.21 4.4 8.5 7.7 1 21 39 59 39 61 0.95
2 39 0.0049 0.1 13.6 0.4 1 23 67 90 67 90 0.96
3 39 1.9 39 5.5 2.9 1 23 96 118 96 118 0.91
4 39 0.017 0.35 11.9 1.7 1 23 124 147 124 147 0.94
5 39 0.00013 0.0026 18.6 1.7 1 23 152 175 152 175 0.96
6 39 0.0066 0.14 13.2 1.8 1 23 184 206 184 206 0.98
7 39 0.00012 0.0024 18.8 0.7 1 23 209 231 209 231 0.96
8 39 0.0001 0.0021 18.9 2.6 1 23 237 259 237 259 0.98
9 39 1.9e-06 3.9e-05 24.4 1.1 1 23 265 287 265 287 0.99
10 39 0.054 1.1 10.4 1.7 1 20 357 376 357 377 0.95
11 39 0.00079 0.016 16.1 1.9 1 23 385 408 385 408 0.97
12 39 0.00084 0.017 16.0 5.3 1 23 414 436 414 436 0.98
13 39 0.0026 0.054 14.5 1.4 1 23 442 465 442 465 0.97
14 39 0.0023 0.047 14.7 3.7 2 23 471 493 470 493 0.96
15 39 0.052 1.1 10.4 0.1 1 23 502 525 502 525 0.96
16 39 0.0017 0.034 15.1 0.5 1 23 528 550 528 550 0.97
17 39 0.00071 0.015 16.3 0.7 1 23 556 578 556 578 0.97
18 39 2.7e-06 5.5e-05 23.9 0.2 1 23 584 606 584 606 0.99
19 39 0.00073 0.015 16.2 0.5 1 23 612 635 612 635 0.98
20 39 0.011 0.22 12.6 3.5 1 23 801 824 801 824 0.96
21 39 0.11 2.3 9.4 3.1 1 23 831 853 831 853 0.98
22 39 0.00023 0.0048 17.8 1.5 1 23 859 882 859 882 0.95
23 39 0.0008 0.016 16.1 1.0 1 23 887 910 887 910 0.97
24 39 0.0034 0.07 14.1 6.2 1 23 919 941 919 941 0.98
25 39 0.00025 0.0051 17.7 0.1 1 23 944 966 944 966 0.99
26 39 0.00023 0.0046 17.8 0.4 2 23 973 994 972 994 0.97
27 39 1.5e-05 0.0003 21.6 0.7 1 23 1000 1022 1000 1022 0.97
28 39 0.0026 0.054 14.5 2.0 1 23 1068 1090 1068 1090 0.98
29 39 0.00036 0.0075 17.2 1.5 1 23 1096 1119 1096 1119 0.97
30 39 0.021 0.43 11.6 1.9 1 23 1125 1148 1125 1148 0.95
31 39 0.9 18 6.5 2.9 1 20 1174 1193 1174 1196 0.91
32 39 4e-05 0.00081 20.2 0.9 1 23 1202 1225 1202 1225 0.97
33 39 0.036 0.73 10.9 0.6 1 23 1232 1254 1232 1254 0.98
34 39 0.019 0.4 11.8 0.7 1 23 1260 1283 1260 1283 0.92
35 39 0.16 3.3 8.9 0.4 1 23 1288 1311 1288 1311 0.96
36 39 0.00074 0.015 16.2 0.4 2 23 1321 1342 1320 1342 0.96
37 39 0.00039 0.008 17.1 0.3 1 23 1345 1367 1345 1367 0.98
38 39 0.00061 0.013 16.5 2.1 1 23 1373 1395 1373 1395 0.98
39 39 8e-05 0.0016 19.3 0.3 1 23 1401 1423 1401 1423 0.98

Sequence Information

Coding Sequence
ATGAATGTCTCACTTTCCAGGAATGTAACGATAAAGGAAGAACCGCTAGAGGAACGCCACACTCTCGCTGCCAGTCTGGATGTCAGTGAAAAGTTCGTCAGACGCCAAGACGGTTTTCACTGTACACAATGCGTTAAAGTATTTTCGTCCAAAACACTGTTCACCAAACATTACCGTTGTCATATTAGTTCGCGACCTTTCGCTTGCGAAATTTGCAATAAGGCTTTCAGATTCAATTGGGAGGTTAATCTTCATAAAAAGAGAGTCCATTGTTCGGAAGAATGTTACACTTGCGTCGTGTGCAATCGGAGATTCAAATCGTTACAGTATTGCAACTTGCACGCCGACACCCACAGAAACATTTATCCTTTCAGTTGCGTTCATTGCGATAAAAAGTTCATCGGCAAACGCGAAATGCAAGAACACATCGACAATAAACACCGGGGCGTCAGATATCATTGCGACGTTTGCGGCAAACCGTTCAGTTCCTCGAACAACGTGAGACAGCACAAAAGACAAATACACGATCCCAATTACGATCCGCCGAAATTCAAATGCGAAAAGTGCGACAAGGTCTGTTTGTCGCGCGGACTCTTGAACAAGCACGTTAGGGCGCACCAGGGCTTCGCGTGTCACGTTTGCGGCAAAGTAGTCACGTCGAAAAAAAGCTTGGAACAACACCTGTTGTTGCATAGCGGCGATAAACCGTTCACTTGCGAGTCTTGCGGCAAGTGTTTCAGCAAGAAAGCGGTTTTGAAAGTTCACCAGCTGACGCACAGTGGGGCGCGGCCGTACGAGTGCAAGTTTTGCGGTAAACGATTCACGCAGCGCAGTCCCCTCGTGATACATATGAGAAGTCACACGGGTGATCGGCCCTATCCGTGCAATCTTTGCGTAGAAGCGATAATCAATAAATCAGTAAAGGAAGAAATCGATGTCAACGAAATGGAAGAATTTGCCAACGCGGTAAAAGAGGAATTCGCGCAAAAACAAAGAGTAAAGAGACCGCGACACGTGAAGCTGACGACGTCGATGATTCTCGAGGCGTTCGTTCGACGCCCGGACGGCTTTCACTGTAAAGTGTGTTCGAAAGTGTTTCCGAACAGGAAACGGTTCACGGCCCATTACGGCTGTCATTTGAATCTGCGACCGTACAACTGCGATCTGTGCAACAAGACGTTCAGGTACAACAGGGACGTTGTCCGGCACAAAAAGACAGTTCACTACGGCGAACGTCCGTTTACGTGCGAGGTGTGCGATAAAAAGTTCAAAACGCTTCACTATTACAACATGCACAGAAACACGCACCTGAACATCTATCCGTTCAAATGCGAACACTGCGACAAACAGTTCACCGTCAAAATCGGAATGCTCGAACACATCAACAGCCAGCACAGGGGCATTAAGTTGCAGTGCGAATTTTGCGAGAAGTCGTTCAACTCCACCAACAATCTGCGACACCACAAGCAGCGCGTTCACGAACAGAGTCGGAAGGAGCCGCAGTACGAGTGCGAAATGTGCGGAAAGATGTGGCTGTCGCGCGGTCTCTTGAACAAACACATGCGGGGCGCGCATCAGGGCTTCGCCTGTCATATGTGCGGCAAAATTGTGACGTCGAAGAAGAGTCTCGACGAACATTTGCTCGTCCACAGCGGCGAGAAACCGTTCATATGCAAAATGTGCGGCAAAGGGTTCAACAAAAAGACTGTTTTGAAAGTACACGAGCTGACGCACAGCGGGGCGAGGCCCTACGAGTGCGCTGTGTGCGGTAAACGGTTCACTCAGCGCAGTCCCCTCGTTATACACATGCGAAGTCATAGCGGAGAAAGACCGTATCAGTGCAAGCTGTGTGCCGAGGCGTTTGTCAGTAAATCGTTATTATCGAATCATGTTAAAAAGAGTCATAGTGTTCAGAAAATAACTTTAAATAATGGTACTAAATTAATCAATGTATCAATACGTATCTACTATTACAGGAATTTTACAAAAACGATAAAAGAAGAGACCATTAAAGAGGAGGATTTACCCGATGCGACTCACTGGATTTCTGAACTGTTAAATGAGGGGAATGCGGGCGGTAAGAGAAAACATAGACGAAAGAACGACGACGAAAGCGACGCCGACACTTACGATTTCCAAGGTGTCGTGAACGACGGAAGTTCAGTTGACAAAACGAAACCTAAGAGAAAATATGTGCGTAGAAAAGTGAAGACTGAGAACGAAGATTTCTACGGAAATCTGCAGGCCGACGAACAAATCACCGATTTTATTAATAAGGTTCAGATTGAGGAGAGTTTTCTTCAGGAAGCGGACGGTTTCCGTTGCAAGACGTGCAACAAAGTCTGCCAGAAGAAAAGTCACTGTAAATTGCATTATTTGaaacacgttaaaataaaaccttTCACTTGTAATATATGTAACAAGAAATTCAAGGCGCCCGAACACGTGCGGTTACATAAAAAGAACAAGCACAGCGGAACCAGAAAGATATATTGCTGTGACGTCTGCAGTTGGACATCGATTTCCGAACACTACTACAAAGTCCACATTAACACTCACCTCAACATTTATCCGTTCGCCTGTTCAGAATGCGACAAAAAGTACACGACGAAAAACTTTCTCGAGAAGCACATCGAGAGCAAACACAAAGGCATGCGCTACGAGTGCGACATCTGTCAGAAGACGTTCGCCTTTCAGGCCGACGTGACGACGCACAAGAAACGCACCCACGATCCGACGTACATACCGCCGCAATTCCAGTGCGACATGTGCGACAAGATCTATCATTCGAAGACGCACCTGAAACGGCACAAGGAGAGCCACCAGGGCTTCACGTGCGAAATTTGCGGTCTGGTCGTCGCGTTCAGGACCGGCTTGCAGCGTCACATGTTGACGCACACGGGCGCCAAACCGCTGACCTGTAAGTTTTGCGGAAAGAGTTTCGCGAGCAGTTCGACGCTCGGCCCGCACATGCGCATACACACCGGCGAGAAACCGCACGAGTGCACCGTGTGCGGCAAGCGGTTCAATCAGCGCAGTCCGCTCGTCATTCACATGCGAGGACACACGGGCGAGCGCCCGCGGACAAACGAAGAAATTATCAGTGCGATTAAAGAGGACGCGAGTGCGGACGTTATTAAAGTAGAGAAAACGACAGAGATACTGTTGGACGATGACGGTTTCGTAGAAACGTCGAACGGTTTCCGCTGTAAACTTTGCGACAAAGTATTCGAAGCGAAACGCCTGTGGAAAAAGCATTACTTGAAACACGTCACCGTAAAACCGTTTCCTTGCGATCTCTGTTCAAAGTCTTTCAAAACGGCGTATCAAATGAACGTGCACAAAAAGAGAATGCACGACTGCGCGGACATTTACGCGTGTAAACTTTGCGACTGGAAATCGTCTAAAAAACAGGAGCTGGCGAAGCATCACCGAGACTCGCATTTAGAAAAGTCGCAGAAACTCGTCATGTGCGAGGTTTATATGAACGAGGACGGTTACGTTTCAAAAGCGAACGGTTTTCATTGCAAGAGTTGTGACAAGGTGTTTGAAGCGAAGAATCTTTGGAGAAAACATTATTGGAAACACATCGACGTCAAACCGTTTCCCTGCGACATTTGCGGCAAAGCGTTCAAATCGGAGTATCAGATGAAGCAGCacaaaaagaaaatacattACGACGAATTAAAAACGTACAGGTGCGACGCCTGCAATTGGCGATCGGCGAACAAGTCCAATTATCTGATGCACCGCGACACCCATTCGAAAAATTACCGTTTCAAATGCACCTATTGCCAGCGTGCTTTCTTGACCAAAGCCGGCTTGAACCATCACGTCGGCATAGCGCACGAGGGAAAAAGATATCCGTGCGACTCGTGCGACAAATCGTTTTTGTGGCCGAGCGCCCTGACGAGTCACCGGAAACGAACGCACGACCCTAACTTCACGCCGCCGGAAATGATGTGCGCCGTTTGCGGGAAACTGTTCACGCGTCGCAGCAGCTACGTGACGCACGTGCAGACGCACAAAGGTTTTCCGTGCGAGTCGTGCGGCAAAGTGATAACGACGAAACACGGTCTCGCGCAACACTTGCGCGTCCACAGCGGAGAACGGACGTTCACGTGCGAATTTTGCGGCAAACGCTTCAACAGGAAGCAGATATTGCGCGTTCACGAACGCACTCACACGGGGGTTAAGCCGTACGAGTGCGCGGTGTGCGGAAAGCGCTTCACTCAGCGAACTCCGCTGATGATACACGCGAGGAAACACAGTGGCGAGAAATTGCCTTAA
Protein Sequence
MNVSLSRNVTIKEEPLEERHTLAASLDVSEKFVRRQDGFHCTQCVKVFSSKTLFTKHYRCHISSRPFACEICNKAFRFNWEVNLHKKRVHCSEECYTCVVCNRRFKSLQYCNLHADTHRNIYPFSCVHCDKKFIGKREMQEHIDNKHRGVRYHCDVCGKPFSSSNNVRQHKRQIHDPNYDPPKFKCEKCDKVCLSRGLLNKHVRAHQGFACHVCGKVVTSKKSLEQHLLLHSGDKPFTCESCGKCFSKKAVLKVHQLTHSGARPYECKFCGKRFTQRSPLVIHMRSHTGDRPYPCNLCVEAIINKSVKEEIDVNEMEEFANAVKEEFAQKQRVKRPRHVKLTTSMILEAFVRRPDGFHCKVCSKVFPNRKRFTAHYGCHLNLRPYNCDLCNKTFRYNRDVVRHKKTVHYGERPFTCEVCDKKFKTLHYYNMHRNTHLNIYPFKCEHCDKQFTVKIGMLEHINSQHRGIKLQCEFCEKSFNSTNNLRHHKQRVHEQSRKEPQYECEMCGKMWLSRGLLNKHMRGAHQGFACHMCGKIVTSKKSLDEHLLVHSGEKPFICKMCGKGFNKKTVLKVHELTHSGARPYECAVCGKRFTQRSPLVIHMRSHSGERPYQCKLCAEAFVSKSLLSNHVKKSHSVQKITLNNGTKLINVSIRIYYYRNFTKTIKEETIKEEDLPDATHWISELLNEGNAGGKRKHRRKNDDESDADTYDFQGVVNDGSSVDKTKPKRKYVRRKVKTENEDFYGNLQADEQITDFINKVQIEESFLQEADGFRCKTCNKVCQKKSHCKLHYLKHVKIKPFTCNICNKKFKAPEHVRLHKKNKHSGTRKIYCCDVCSWTSISEHYYKVHINTHLNIYPFACSECDKKYTTKNFLEKHIESKHKGMRYECDICQKTFAFQADVTTHKKRTHDPTYIPPQFQCDMCDKIYHSKTHLKRHKESHQGFTCEICGLVVAFRTGLQRHMLTHTGAKPLTCKFCGKSFASSSTLGPHMRIHTGEKPHECTVCGKRFNQRSPLVIHMRGHTGERPRTNEEIISAIKEDASADVIKVEKTTEILLDDDGFVETSNGFRCKLCDKVFEAKRLWKKHYLKHVTVKPFPCDLCSKSFKTAYQMNVHKKRMHDCADIYACKLCDWKSSKKQELAKHHRDSHLEKSQKLVMCEVYMNEDGYVSKANGFHCKSCDKVFEAKNLWRKHYWKHIDVKPFPCDICGKAFKSEYQMKQHKKKIHYDELKTYRCDACNWRSANKSNYLMHRDTHSKNYRFKCTYCQRAFLTKAGLNHHVGIAHEGKRYPCDSCDKSFLWPSALTSHRKRTHDPNFTPPEMMCAVCGKLFTRRSSYVTHVQTHKGFPCESCGKVITTKHGLAQHLRVHSGERTFTCEFCGKRFNRKQILRVHERTHTGVKPYECAVCGKRFTQRTPLMIHARKHSGEKLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01510995;
90% Identity
iTF_01510995;
80% Identity
-