Xxan006438.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xanthostigma xanthostigma
Gene Symbol
Hr39
Assembly
GCA_963575645.1
Location
OY754466.1:41432926-41446694[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3 2.6e+04 -6.9 12.4 44 161 184 308 155 362 0.40
2 3 1.5e-08 0.00013 22.1 0.0 1 28 487 514 487 556 0.69
3 3 5.9e-75 5.1e-71 240.8 0.2 202 408 612 813 534 813 0.92

Sequence Information

Coding Sequence
ATGGCACGCGGAGCGTCTGCCCGGCAAGCATCGTCCGTCAGCAAAATAGCACCGCCCTTTCGACAGGGACAAGCAGAGACACGGGACGAGGACGCGGGCGATAGCGGAAGCAGCGAGGCGGCAACCTCATTCGACGAAATTGTAGCGAAGATGGCGGCGACGGCGGCTGGTGCCGCTACCGCGACTGCCACCACaaacaataacaacaacaatgtGTCCGTGACGGCGATCAATGTCGACAGTACGGCGTACTATTCGCTGGCGACACCTGGAAAGACGGAGCCACCGGACGCCGCGGACAGCGGCTCGGATTCGGAAGTCGCGCAAATCGACTTTCACAACGGTGTCAATATGAGGCACAAGAAAGGGGACATTAAGGTTCAGGAAGTGCCACGTCCGATGTCTTGGGAAGGTGAACTGTCAGACGGCGAATCAGGCAACGGCGGAATGATGTGCGTCGACGAGGACTCGTCACACATGCATCCCATCAACAACGCACAACCGACGACTACCACCATAACCAGTAGCGGCATAATGTCGCACCTGTCGTCCGGTCATCATCTTCACCAACACCAGCCGCACCATCACCAATCGATGCCGGAAAACTTGTCCACGTGTACGGTGACGGGTCCTCCGCGACAGCAGACGACGCTGTCGTTGGCCGGCAGTCCTGCGGCCGTCAGACTGAAGCAACagacggcggcggcggcgggtgGCGGCGCCTCGCTTCACAGTACGCCTTCCCACTCGCCGCTCATGAGCCAGCGGCCGCTCAGGCAGCTTAATGTGCCGGCGACGCCGAGTCCGGACTCTGCCGTTCACAGTGCATACAGTGTGTTCAGTTCGCCTACGCAATCGCCTCTGACACAGAGACACATCACGCTAACGCCGTCGCTATCGCGTAACAATAGTGACGCCTCGCATTCCAGCTGTTGCAGCTACTCGAGTGTCAGTGTTAGTGTTTCGCCGACGCAACAGTTCTCGCCTACACATTCGCCCATACAGGGCCGCCATATTCCACAGATGCACGGAAGTCCGTTGCATCACAACGTCATCTACCGTAGTGTACCAGACGTTGACCATGCCGGTTTGTATCGACAGGCCTCGCTTCCCCAGCCCGATGAACTCCTGAATGGCGAACACGATATCAGTTCACAGCAGCTGGAAGACAATGACGATAAAACGGGCATTGTGCCTACAGTACTGCCAACTGGACAGGGTATATCGAGACAGCAACTGATTAATAGtCCTTGTCCAATTTGTGGAGACAAGATATCTGGATTTCATTATGGAATATTCAGTTGTGAATCGTGTAAAGGATTTTTCAAACGGACGGTACAGAATCGTAAAAACTACGTGTGTTTGCGCGGTGCACTTTGTCCCGTTACGGTAGCCACTCGAAAGAAGTGTCCCGCATGCCGTTTTGACAAATGCCTACAGTGCGGAATGAAACTTGAAGCTATAAGAGAAGATAGAACACGCGGCGGTAGATCTACTTATCAGTGCTCGTACAATGTACCGACATCGTTAACGTCGTCTAACGACCTACAAGGAGGTGCTGGTGTTCTCGGAGGAGCGTCTGTTAAGTTAGAGCCAGCCGAGCCATCGCCCACATCAACCATGCCCAATGCCCAGCGAAGGCTAGCTGTCCCGTCATTATTACAGGAAATAATGGACGTGGAACATCTGTGGCACTACAACGAATTAGAGTTAAACAAGCTCAGCGTGGACGGTACGCTCGGCAATTGTAAACCGGGAAGCGCCAACAGCTCCAGCAGTAGTTTCAGTCTAACTACGAATACGCTACTCGGCGGTCTTGCCAGTTCGGCGAGTGCTTCTGATTCAAATCCGGACTTTTTAGCTAACTTGTGTAACATCGCTGATCATCGGCTGTACAAAATTGTTAAGTGGTGTAAAAGTTTgccgttatttaaaaatatttcgATTGATGATCAGATATGTTTGCTAATAAATTCGTGGTGTGAATTACTTCTGTTTTCTTGTTGTTTTCGGTCTATGTCAACGCCAGGGGAAATTAAAatatCGTTAGGGAAAAGTATAAATTTAGCTCAGGCGCGTGAGATGGGCCTTCAGGCTTGTATAGAGCGCATGCTTAATTTCACGGAACATTTAAGACGCTTAAGGGTCGACAAATACGAGTATGTAGCGATGAAGGTTATTGTACTCCTTACGTCCGATACTTCAGAATTAAGAGAAGTCGAAAAAGTAAGAGCATCACAAGAAAAAGCGTTGCAAGCACTGCAAGCTTACACCTTAGCGCACTATCCGGATAGTCCTGCTAAATTCGGTGAACTCTTATTACGTATACCGGAATTGCAACGCACTTGTCAGgtCGGCAAAGAAATGCTCTCGATAAAATCGAAAGAGGGCGAGGGTCCAAGCTTCAACTTACTGATGGAACTACTTCGTGGTGACCACTGA
Protein Sequence
MARGASARQASSVSKIAPPFRQGQAETRDEDAGDSGSSEAATSFDEIVAKMAATAAGAATATATTNNNNNNVSVTAINVDSTAYYSLATPGKTEPPDAADSGSDSEVAQIDFHNGVNMRHKKGDIKVQEVPRPMSWEGELSDGESGNGGMMCVDEDSSHMHPINNAQPTTTTITSSGIMSHLSSGHHLHQHQPHHHQSMPENLSTCTVTGPPRQQTTLSLAGSPAAVRLKQQTAAAAGGGASLHSTPSHSPLMSQRPLRQLNVPATPSPDSAVHSAYSVFSSPTQSPLTQRHITLTPSLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHIPQMHGSPLHHNVIYRSVPDVDHAGLYRQASLPQPDELLNGEHDISSQQLEDNDDKTGIVPTVLPTGQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGALCPVTVATRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYNVPTSLTSSNDLQGGAGVLGGASVKLEPAEPSPTSTMPNAQRRLAVPSLLQEIMDVEHLWHYNELELNKLSVDGTLGNCKPGSANSSSSSFSLTTNTLLGGLASSASASDSNPDFLANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIKISLGKSINLAQAREMGLQACIERMLNFTEHLRRLRVDKYEYVAMKVIVLLTSDTSELREVEKVRASQEKALQALQAYTLAHYPDSPAKFGELLLRIPELQRTCQVGKEMLSIKSKEGEGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01530348; iTF_01510682; iTF_01510838;
90% Identity
iTF_01510682;
80% Identity
iTF_01530348;